Ggra9324.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra9324.t1
Unique NameGgra9324.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length463
Homology
BLAST of Ggra9324.t1 vs. uniprot
Match: A0A2V3J664 (NADAR domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J664_9FLOR)

HSP 1 Score: 268 bits (686), Expect = 3.360e-85
Identity = 125/175 (71.43%), Postives = 146/175 (83.43%), Query Frame = 0
Query:  285 QGFEAQASFVFFYGHDAAHGPQAMLSNFWRCPEPFTHSENRRYPTSEHYMMHGKAVLFGDEQRATAILNASTPRSAKALGRKVRNFEAETWAQHRLQIVAEGCLLKFAQCEEARRFLLATGDRILVEAAPRDCIWGIGIGASHAHRCDPSKWRGLNLLGEALMMVRDRLRENHED 459
            +G ++++SF+FFYGH A+ GP+A+LSNFW CPEPF  S NRR+PTSEH+MMHGKAVLFGD   A  ILNA TP +AK  GRKVRNF+ +TW  HR+ IVAEGC LKF+QCEEA RFLLATGDRILVEA+PRD IWGIG+G S+ +R DPSKW GLNLLGEALM+VRDRLRE  ED
Sbjct:   14 EGTKSESSFLFFYGHSASEGPKAVLSNFWLCPEPFVDSANRRFPTSEHFMMHGKAVLFGDTDMAELILNAPTPLAAKRFGRKVRNFDQDTWKNHRINIVAEGCFLKFSQCEEAGRFLLATGDRILVEASPRDRIWGIGMGMSNRNRFDPSKWGGLNLLGEALMIVRDRLREREED 188          
BLAST of Ggra9324.t1 vs. uniprot
Match: A0A7W9M065 (RibA/ribD-fused uncharacterized protein n=2 Tax=Saccharothrix ecbatanensis TaxID=1105145 RepID=A0A7W9M065_9PSEU)

HSP 1 Score: 173 bits (439), Expect = 1.120e-48
Identity = 88/166 (53.01%), Postives = 112/166 (67.47%), Query Frame = 0
Query:  291 ASFVFFYGHDAAHGP---QAMLSNFWRCPEPFTHSENRRYPTSEHYMMHGKAVLFGDEQRATAILNASTPRSAKALGRKVRNFEAETWAQHRLQIVAEGCLLKFAQCEEARRFLLATGDRILVEAAPRDCIWGIGIGASHAHRCDPSKWRGLNLLGEALMMVRDRL 453
            A ++FF+GH+A  G    +  LS +W  P  FT  + R Y T+EHYMM GKA++FGDE  A  +L A TPR AK+LGR+VR F+ +TW   RL +V  G L KF   ++ R +LL TG+R+LVEA+P D IWGIG+ A      DP+ WRGLNLLGEALM VRDRL
Sbjct:    2 AKYLFFWGHEAKPGAPVGKQCLSQWWEAP--FT-EDGRDYRTAEHYMMWGKALMFGDEHTAARVLAARTPREAKSLGRQVRGFDDDTWVAGRLDVVVRGNLAKFGAHDDLREYLLGTGERVLVEASPLDRIWGIGLAADDERAADPATWRGLNLLGEALMEVRDRL 164          
BLAST of Ggra9324.t1 vs. uniprot
Match: NADAR family protein n=1 Tax=Saccharothrix deserti TaxID=2593674 RepID=UPI00131C4EED (NADAR family protein n=1 Tax=Saccharothrix deserti TaxID=2593674 RepID=UPI00131C4EED)

HSP 1 Score: 171 bits (433), Expect = 8.610e-48
Identity = 90/167 (53.89%), Postives = 111/167 (66.47%), Query Frame = 0
Query:  291 ASFVFFYGHDAAHGP---QAMLSNFWRCPEPFTHSENRRYPTSEHYMMHGKAVLFGDEQRATAILNASTPRSAKALGRKVRNFEAETWAQHRLQIVAEGCLLKFAQCEEARRFLLATGDRILVEAAPRDCIWGIGIGASHAHRCDPSKWRGLNLLGEALMMVRDRLR 454
            A ++FF+GH+A  G    +  LS +W  P  FT  + R Y T+EH+MM GKA+LFGDE  A  +L A TP  AKALGR+VR F+ + WA  RL IV  G L KF   ++ R +LL TGDR+LVEA+P D +WGIG+ A      DPS W GLNLLGEALM VRDRLR
Sbjct:    2 AKYLFFWGHEARPGAPVGKQCLSQWWEAP--FT-VDGRTYRTAEHFMMCGKALLFGDEDTAARVLAARTPGEAKALGRQVRGFDEDAWAAARLDIVVRGNLAKFGAHDDLRDYLLRTGDRVLVEASPLDRVWGIGLAADDGRAADPSTWLGLNLLGEALMDVRDRLR 165          
BLAST of Ggra9324.t1 vs. uniprot
Match: A0A5Q0HF39 (NADAR family protein n=3 Tax=Saccharothrix syringae TaxID=103733 RepID=A0A5Q0HF39_SACSY)

HSP 1 Score: 170 bits (431), Expect = 1.450e-47
Identity = 86/164 (52.44%), Postives = 113/164 (68.90%), Query Frame = 0
Query:  294 VFFYGHDAAHGP---QAMLSNFWRCPEPFTHSENRRYPTSEHYMMHGKAVLFGDEQRATAILNASTPRSAKALGRKVRNFEAETWAQHRLQIVAEGCLLKFAQCEEARRFLLATGDRILVEAAPRDCIWGIGIGASHAHRCDPSKWRGLNLLGEALMMVRDRLR 454
            +FF+GH    G    +  LS ++  P  FT  + R YPT+EHYMM GKA+LFGDE+ A  +L A TP  AKALGR+VR F+ + WA+HR+ +V  G L KF   ++ R +LL+TGDR+LVEA+P D +WGIG+ A      DPS+W GLNLLG+ALM VR+RLR
Sbjct:    1 MFFWGHRTRPGAPVGKQCLSQWYEAP--FT-EDGRTYPTAEHYMMAGKALLFGDEEVAARVLAARTPVEAKALGRQVRGFDGDRWAEHRVDVVVRGNLAKFRAHDDLRSYLLSTGDRVLVEASPVDRVWGIGLAADDERAADPSRWLGLNLLGQALMTVRERLR 161          
BLAST of Ggra9324.t1 vs. uniprot
Match: A0A1Q4XY00 (NADAR domain-containing protein n=3 Tax=Saccharothrix TaxID=2071 RepID=A0A1Q4XY00_9PSEU)

HSP 1 Score: 166 bits (421), Expect = 6.870e-46
Identity = 88/173 (50.87%), Postives = 111/173 (64.16%), Query Frame = 0
Query:  289 AQASFVFFYGHDAAHGP------QAMLSNFWRCPEPFTHSENRRYPTSEHYMMHGKAVLFGDEQRATAILNASTPRSAKALGRKVRNFEAETWAQHRLQIVAEGCLLKFAQCEEARRFLLATGDRILVEAAPRDCIWGIGIGASHAHRCDPSKWRGLNLLGEALMMVRDRLRE 455
            A   +VFF+G  +  G       +  LS +W    PFT  +   + T+EH+MMHGKA+LFGDE  A  +L A+TP  AK+LGR+VR F  +TW  +RL +V  G L KF   + ARRFLL TGDR+LVEA+P D IWGIG+ A      DP+ W GLNLLGEALM VR RLR+
Sbjct:    7 AVTEYVFFWGPGSRSGASVGSVGEECLSQWWE--SPFT-VDGHTFRTAEHFMMHGKALLFGDEDIARRVLAAATPGEAKSLGRRVRGFAEDTWVANRLDVVVRGNLAKFGAHDGARRFLLGTGDRVLVEASPLDRIWGIGLAADDPRAADPASWLGLNLLGEALMEVRARLRQ 176          
BLAST of Ggra9324.t1 vs. uniprot
Match: NADAR family protein n=1 Tax=Plantactinospora mayteni TaxID=566021 RepID=UPI001941E277 (NADAR family protein n=1 Tax=Plantactinospora mayteni TaxID=566021 RepID=UPI001941E277)

HSP 1 Score: 167 bits (422), Expect = 7.540e-46
Identity = 94/187 (50.27%), Postives = 115/187 (61.50%), Query Frame = 0
Query:  276 AGVDSLAELQG---FEAQASFVFFYGH----DAAHGPQAMLSNFWRCPEPFTHSENRRYPTSEHYMMHGKAVLFGDEQRATAILNASTPRSAKALGRKVRNFEAETWAQHRLQIVAEGCLLKFAQCEEARRFLLATGDRILVEAAPRDCIWGIGIGASHAHRCDPSKWRGLNLLGEALMMVRDRLRE 455
            A V S+AEL G     A+  F+ F+GH    D + G    LS +W  P PFT  +  R+ T+EHYMM  KA LFGD   AT IL    P +AK LGR+V  F+ + W QHR  IV  G + KF Q    R +LL TG+R+LVEA+P D IWGIG+GA H H  DP++WRGLNLLG ALM  R  LRE
Sbjct:    3 ASVSSVAELTGEVRAGARVKFLLFWGHQPQRDGSIGA-GCLSQWW--PVPFT-VDGLRFATAEHYMMWRKATLFGDHATATEILTVVHPHAAKTLGRQVTGFDQQIWEQHRYDIVVAGNVAKFGQHSTLRTYLLGTGERVLVEASPLDRIWGIGLGADHPHAADPARWRGLNLLGFALMQARVLLRE 185          
BLAST of Ggra9324.t1 vs. uniprot
Match: NADAR family protein n=1 Tax=Saccharothrix sp. S26 TaxID=2907215 RepID=UPI001F15DF94 (NADAR family protein n=1 Tax=Saccharothrix sp. S26 TaxID=2907215 RepID=UPI001F15DF94)

HSP 1 Score: 165 bits (417), Expect = 1.950e-45
Identity = 87/166 (52.41%), Postives = 107/166 (64.46%), Query Frame = 0
Query:  293 FVFFYGHDAAHGPQA---MLSNFWRCPEPFTHSENRRYPTSEHYMMHGKAVLFGDEQRATAILNASTPRSAKALGRKVRNFEAETWAQHRLQIVAEGCLLKFAQCEEARRFLLATGDRILVEAAPRDCIWGIGIGASHAHRCDPSKWRGLNLLGEALMMVRDRLRE 455
            ++FF+GH A  G  A    LS +W  P  FT  +   YPT+EH+MM GKA LF D + A  +L A TP  AKALGR+VR F  + W  HRL+IV  G L KF   ++ R FLL TGDR+LVEA+P D +WGIG+ A      DP+ W GLNLLGEALM VR RLR+
Sbjct:    4 YLFFWGHRARPGAPAGKHCLSQWWEAP--FT-VDGLTYPTAEHFMMWGKARLFDDAETAERVLAARTPGEAKALGRRVRGFTEDAWVAHRLEIVVRGNLAKFGAHDDLRAFLLGTGDRVLVEASPLDRVWGIGLAADDERAADPATWLGLNLLGEALMEVRARLRQ 166          
BLAST of Ggra9324.t1 vs. uniprot
Match: A0A1H7CB10 (NADAR domain-containing protein n=1 Tax=Micromonospora phaseoli TaxID=1144548 RepID=A0A1H7CB10_9ACTN)

HSP 1 Score: 165 bits (417), Expect = 4.090e-45
Identity = 88/182 (48.35%), Postives = 110/182 (60.44%), Query Frame = 0
Query:  278 VDSLAELQGFEAQASFVFFYGH----DAAHGPQAMLSNFWRCPEPFTHSENRRYPTSEHYMMHGKAVLFGDEQRATAILNASTPRSAKALGRKVRNFEAETWAQHRLQIVAEGCLLKFAQCEEARRFLLATGDRILVEAAPRDCIWGIGIGASHAHRCDPSKWRGLNLLGEALMMVRDRLRE 455
            VD L        +  F+FF+GH    D + GP   LS +W  P PFT  + +R+ T+EHYMM  KA LF D   A  IL AS P +AK LGR+V  F+ + W QHR  IV  G + KF Q      +LL TG+R+LVEA+P D +WGIG+ A H H  DP++WRGLNLLG ALM  R  LRE
Sbjct:    8 VDGLTGAVRAGTRVKFLFFWGHQPQRDGSIGP-GCLSQWW--PAPFT-IDGQRFATAEHYMMWRKATLFDDHATAARILTASHPHAAKTLGRQVAGFDQQVWEQHRYDIVVAGSVAKFGQHPALHTYLLGTGERVLVEASPLDRVWGIGLAADHPHATDPARWRGLNLLGFALMQTRTNLRE 185          
BLAST of Ggra9324.t1 vs. uniprot
Match: A0A543J5D2 (NADAR domain-containing protein n=1 Tax=Saccharothrix saharensis TaxID=571190 RepID=A0A543J5D2_9PSEU)

HSP 1 Score: 163 bits (413), Expect = 7.540e-45
Identity = 83/165 (50.30%), Postives = 108/165 (65.45%), Query Frame = 0
Query:  293 FVFFYGHDAAHGP---QAMLSNFWRCPEPFTHSENRRYPTSEHYMMHGKAVLFGDEQRATAILNASTPRSAKALGRKVRNFEAETWAQHRLQIVAEGCLLKFAQCEEARRFLLATGDRILVEAAPRDCIWGIGIGASHAHRCDPSKWRGLNLLGEALMMVRDRLR 454
            ++FF+GH+A  G    +  LS +W  P  FT  +   + T+EH+MMHGKA++FGDE+ A  +L A TP  AKALGR+VR F  + W   RL +V    L KF   ++ R FLL TGDR+LVEA+P D +WGIG+ A      DP++W GLNLLGEALM VR RLR
Sbjct:    4 YLFFWGHEARPGAPVGKQCLSQWWEAP--FT-VDGLTFRTAEHFMMHGKALVFGDEETARRVLAARTPGEAKALGRRVRGFTEDVWVAERLDVVVRANLAKFGAHDDLREFLLGTGDRVLVEASPVDRVWGIGLAADDERAADPARWPGLNLLGEALMEVRARLR 165          
BLAST of Ggra9324.t1 vs. uniprot
Match: A0A239NDS9 (NADAR domain-containing protein n=6 Tax=Actinomadura TaxID=1988 RepID=A0A239NDS9_9ACTN)

HSP 1 Score: 164 bits (415), Expect = 7.560e-45
Identity = 89/175 (50.86%), Postives = 111/175 (63.43%), Query Frame = 0
Query:  281 LAELQGFEAQASFVFFYGHDAAHGPQAMLSNFWRCPEPFTHSENRRYPTSEHYMMHGKAVLFGDEQRATAILNASTPRSAKALGRKVRNFEAETWAQHRLQIVAEGCLLKFAQCEEARRFLLATGDRILVEAAPRDCIWGIGIGASHAHRCDPSKWRGLNLLGEALMMVRDRLRE 455
            LA +Q   A+  F+FF+GH      +  LS +W  P PFT  +   Y T+EHYMM GKA LFGDE+ A A++ AS PR AK LGR+VRNF+ ETW  HR+ IV      KF Q  E R +LL TGDR+LVEA+P D +WGIG+ A        + WRG NLLG ALM VR+ LR+
Sbjct:   18 LARMQNERARLKFLFFWGHRTPG--RGYLSQWW--PSPFT-VDGVTYQTAEHYMMAGKARLFGDEETAAAVIAASHPRRAKDLGRRVRNFDEETWRNHRVAIVTRANEAKFGQHGELRDYLLGTGDRVLVEASPLDRVWGIGLAADDPRAEQVASWRGENLLGFALMTVRESLRD 187          
The following BLAST results are available for this feature:
BLAST of Ggra9324.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J6643.360e-8571.43NADAR domain-containing protein n=1 Tax=Gracilario... [more]
A0A7W9M0651.120e-4853.01RibA/ribD-fused uncharacterized protein n=2 Tax=Sa... [more]
NADAR family protein n=1 Tax=Saccharothrix deserti TaxID=2593674 RepID=UPI00131C4EED8.610e-4853.89NADAR family protein n=1 Tax=Saccharothrix deserti... [more]
A0A5Q0HF391.450e-4752.44NADAR family protein n=3 Tax=Saccharothrix syringa... [more]
A0A1Q4XY006.870e-4650.87NADAR domain-containing protein n=3 Tax=Saccharoth... [more]
NADAR family protein n=1 Tax=Plantactinospora mayteni TaxID=566021 RepID=UPI001941E2777.540e-4650.27NADAR family protein n=1 Tax=Plantactinospora mayt... [more]
NADAR family protein n=1 Tax=Saccharothrix sp. S26 TaxID=2907215 RepID=UPI001F15DF941.950e-4552.41NADAR family protein n=1 Tax=Saccharothrix sp. S26... [more]
A0A1H7CB104.090e-4548.35NADAR domain-containing protein n=1 Tax=Micromonos... [more]
A0A543J5D27.540e-4550.30NADAR domain-containing protein n=1 Tax=Saccharoth... [more]
A0A239NDS97.560e-4550.86NADAR domain-containing protein n=6 Tax=Actinomadu... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012816NADARPFAMPF08719NADARcoord: 295..454
e-value: 3.9E-50
score: 170.3
IPR012816NADARTIGRFAMTIGR02464TIGR02464coord: 294..453
e-value: 7.2E-46
score: 154.2
IPR012816NADARCDDcd15457NADARcoord: 292..451
e-value: 1.53457E-70
score: 218.637
IPR037238YbiA-like superfamilyGENE3D1.10.357.40coord: 284..461
e-value: 6.2E-48
score: 164.4
IPR037238YbiA-like superfamilySUPERFAMILY143990YbiA-likecoord: 291..456
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 45..67
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..44
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 68..462
NoneNo IPR availableTMHMMTMhelixcoord: 45..67

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000863_piloncontigtig00000863_pilon:818458..824204 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra9324.t1Ggra9324.t1Gracilaria gracilis GNS1m malemRNAtig00000863_pilon 818458..824204 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra9324.t1 ID=Ggra9324.t1|Name=Ggra9324.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=463bp
MESVTNPVKAQYQSIPGVPGTAASYAQVPGGLIRNVNSIPLFRRFGSLVG
LAVTVSLLAFVAGRAGIIERENGFRVSHLYPALPRKLHEARHFKFSNYPS
LSRPLHSSYGSRLNPDSFISESVVHSDASSTLEDFTLDERVPTRQCGRRR
VCRARLTVVKEGSAVVIKAGYYIYTKDGKVRTVDRGTRSRLRKTTTKQAR
NWASKLLSGAGARLAEVNCTVSVNDIAEAILDGKDGVLTCPKTGDSRCDA
LKTIGECTIPEAKEVDPCTEFVKTSAGVDSLAELQGFEAQASFVFFYGHD
AAHGPQAMLSNFWRCPEPFTHSENRRYPTSEHYMMHGKAVLFGDEQRATA
ILNASTPRSAKALGRKVRNFEAETWAQHRLQIVAEGCLLKFAQCEEARRF
LLATGDRILVEAAPRDCIWGIGIGASHAHRCDPSKWRGLNLLGEALMMVR
DRLRENHEDCSE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012816NADAR
IPR037238YbiA-like_sf