Ggra10058.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra10058.t1
Unique NameGgra10058.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length396
Homology
The following BLAST results are available for this feature:
BLAST of Ggra10058.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSMARTSM01411GCC2_GCC3_2coord: 237..283
e-value: 1.3
score: 15.9
coord: 43..85
e-value: 1.4E-7
score: 41.2
coord: 107..153
e-value: 4.2E-7
score: 39.6
coord: 171..215
e-value: 2.2
score: 13.8
NoneNo IPR availableGENE3D2.10.50.10Tumor Necrosis Factor Receptor, subunit A, domain 2coord: 234..293
e-value: 2.3E-5
score: 26.4
coord: 40..108
e-value: 9.2E-9
score: 37.3
coord: 109..165
e-value: 1.3E-8
score: 36.7
NoneNo IPR availablePANTHERPTHR46967INSULIN-LIKE GROWTH FACTOR BINDING PROTEIN,N-TERMINALcoord: 21..154
coord: 230..309
coord: 134..272
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..23
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 24..395
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 19..23
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 7..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..6
IPR011641Tyrosine-protein kinase ephrin type A/B receptor-likePFAMPF07699Ephrin_rec_likecoord: 47..77
e-value: 1.7E-6
score: 27.7
coord: 107..143
e-value: 6.8E-8
score: 32.2
IPR009030Growth factor receptor cysteine-rich domain superfamilySUPERFAMILY57184Growth factor receptor domaincoord: 98..236
IPR009030Growth factor receptor cysteine-rich domain superfamilySUPERFAMILY57184Growth factor receptor domaincoord: 22..141
IPR009030Growth factor receptor cysteine-rich domain superfamilySUPERFAMILY57184Growth factor receptor domaincoord: 212..302

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000862_piloncontigtig00000862_pilon:29343..30530 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra10058.t1Ggra10058.t1Gracilaria gracilis GNS1m malemRNAtig00000862_pilon 29343..30530 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra10058.t1 ID=Ggra10058.t1|Name=Ggra10058.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=396bp
MSFFFKLALCSLLFHSVLGSAPCDPGWGTTWNDYGLCEICKPGFYDNGIG
FCQICRSGTYQPESGHTECNRCPSGTYSGHGFESCVSCPEGEVYVESSAR
CGLCPAGEYFDTGVQRCTYCSPGFFKAEEGLRPCLPCPPNTNSVYSATEC
IACPEGQALMKDGTCGTCPAGQHYDEFDNDCYDCLPGEYTETENVLPKCY
KCGGNSFSPAAASQCFECPDGEVFIKDSGECGHCDIGQHYHESDLSCHDC
SLNSFSHGSNRRTCRICLPGSFARPRSSTCFLCPAGQVYLVQTDQCGECP
EGTQYISHGARCDGDPNGMPSPEPVEELIISPSPDPVEEVLISSSPIPGL
DLETDYEEILDLESPKPELGLGIEYGEFMDIEMGTPEPSAEIILL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011641Tyr-kin_ephrin_A/B_rcpt-like
IPR009030Growth_fac_rcpt_cys_sf