Ggra8973.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra8973.t1
Unique NameGgra8973.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length565
Homology
BLAST of Ggra8973.t1 vs. uniprot
Match: A0A2V3ID94 (RNA helicase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ID94_9FLOR)

HSP 1 Score: 867 bits (2241), Expect = 5.610e-312
Identity = 436/565 (77.17%), Postives = 485/565 (85.84%), Query Frame = 0
Query:    1 MHDHDLTQYSVLILDEAHERTLSTDVLMGLIKSIIKRRYDLKVIVMSATLNAEQFQTYFDNAPLLNVPGRMFPVAIHYSQSPENDYVEATIRVVTDVCRSEPPGDILVFLTGEEEIEETCHRLSSITASRERVDGPVQVLPLYGSLSTDRQQLVFGPPPPPLFPGGRPGRKVIVATNIAETSLTIDGVVYVVDSGFSKQKLYNPRVRVESLLVQGISRASAKQRAGRAGRTRPGKCYRLYTEDAFHKELSETTHPEILRSNLGNVVLQLKKLGVDDLVHFDFMDPPAPETMMRALELLNYLGALDDEGDLTEFGSTMSEFPLDPESAAALIHSPEYNCSEEIVSIVAMISSAGNCFVRPRHQGKRR-GKYHNPHRKFQHPDGDHLTLLNVYHAYKECKARAERKYELHRWCQENLLNYRALAMADNSRLQIANIMRKCGLPLVSTSKDDRKHSENIRKALLKGFFMQVASKSFRKGKFYLTVKDQQSVLLHPSCGLGSIPQWVMYNEFVLTNTNYIRTCSQVNGTWLLELAPIYYDLSNFPDGEAKKELERMSASTRRKRSRVDR 564
            M D DL  YS +ILDEAHERTLSTDVLMGLIK+++KRR DLK+IVMSATLNAEQFQ YFD APLL+VPGRMFPV IHYS+SPE+DYVEA IRVVTD+CRSEPPGDILVFLTGEEEIEETC R++SITA+RER+DGPV                                   I ATNIAETSLTIDG+VYVVDSGFSKQKLYNPRVRVESLLVQGISRASAKQRAGRAGRT+PGKC+RLYTE+AF+KEL ETTHPEILRSNLGNVVLQLKKL +DDLVHFDFMDPPAPETMMRALELLNYLGALDDEGDLT+FGSTMSEFPLDPES+AALIHS EY CSEE+VSIV+M+SSAGNCF+RPRHQ KRR GK  NPHR+FQH DGDHLTLLNVYHAY E K ++  +    RWCQEN++N+RALAMADNSR Q+ANIMR+C +PL+S S DD K+S+NIRKALL+GFFMQ+AS+SF KGK YLTVKDQQ+VLLHPSCGLGS PQWVMYNEFVLTNTNYIRTCS VNG+WLLELAP+YYDLSNFP+GEAK+ELER+    +RKRS + R
Sbjct:  146 MKDPDLNAYSAIILDEAHERTLSTDVLMGLIKTVMKRRKDLKIIVMSATLNAEQFQNYFDKAPLLSVPGRMFPVTIHYSKSPEHDYVEAAIRVVTDICRSEPPGDILVFLTGEEEIEETCGRITSITAARERIDGPV-----------------------------------ICATNIAETSLTIDGIVYVVDSGFSKQKLYNPRVRVESLLVQGISRASAKQRAGRAGRTQPGKCFRLYTEEAFYKELPETTHPEILRSNLGNVVLQLKKLDIDDLVHFDFMDPPAPETMMRALELLNYLGALDDEGDLTQFGSTMSEFPLDPESSAALIHSHEYGCSEEVVSIVSMLSSAGNCFLRPRHQKKRRHGKQVNPHRRFQHVDGDHLTLLNVYHAYIESKHQSGVRNSAFRWCQENMINHRALAMADNSRTQLANIMRRCNIPLLSLSDDDLKYSQNIRKALLRGFFMQIASRSFGKGKTYLTVKDQQNVLLHPSCGLGSTPQWVMYNEFVLTNTNYIRTCSHVNGSWLLELAPVYYDLSNFPEGEAKRELERVRTKLQRKRSNMQR 675          
BLAST of Ggra8973.t1 vs. uniprot
Match: R7QGQ7 (Predicted pre-mRNA splicing factor ATP-dependent RNA helicase PRP43 n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QGQ7_CHOCR)

HSP 1 Score: 738 bits (1905), Expect = 1.590e-259
Identity = 373/551 (67.70%), Postives = 432/551 (78.40%), Query Frame = 0
Query:    1 MHDHDLTQYSVLILDEAHERTLSTDVLMGLIKSIIKRRYDLKVIVMSATLNAEQFQTYFDNAPLLNVPGRMFPVAIHYSQSPENDYVEATIRVVTDVCRSEPPGDILVFLTGEEEIEETCHRLSSITASRERVDGPVQVLPLYGSLSTDRQQLVFGPPPPPLFPGGRPGRKVIVATNIAETSLTIDGVVYVVDSGFSKQKLYNPRVRVESLLVQGISRASAKQRAGRAGRTRPGKCYRLYTEDAFHKELSETTHPEILRSNLGNVVLQLKKLGVDDLVHFDFMDPPAPETMMRALELLNYLGALDDEGDLTEFGSTMSEFPLDPESAAALIHSPEYNCSEEIVSIVAMISSAGNCFVRPRHQGKRRGKYHNPHRKFQHPDGDHLTLLNVYHAYKECKARAERKYELHRWCQENLLNYRALAMADNSRLQIANIMRKCGLPLVSTSKDDRKHSENIRKALLKGFFMQVASKSFRKGKFYLTVKDQQSVLLHPSCGLGSIPQWVMYNEFVLTNTNYIRTCSQVNGTWLLELAPIYYDLSNFPDGEAKKELERM 551
            M D+ L  YS ++LDEAHERTLSTDVLMGL+K ++K+R DLKV+VMSATL+A++FQ YFD APLL+VPGR+FPV I YS  PE+DYV+A IR V  +CR+EP GD+L+FLTGEEEIEE+C ++       ER  GPV VLPLYGSL  DRQQ VF  PPPPL+ GG PGRKVI ATNIAETSLTIDGVVYVVD+GFSKQK+YNPRVRVESLLVQ ISRASAKQRAGRAGRTRPGKC+RLYTE++FHK L ETTHPEILRSNLGNVVLQLK LG+DDLVHFDFMDPPAPET+MRALELLNYLGALDDEGDLT FG  MSEFPL PES+AALI SP++ CS E+++IVAM+SSA NCFVR + + K   +   PH +F   +GDHLTLLNV+HAYKE   + + +    +WC +N LN RAL  A N R Q+   MR C L LVST      +S NIR+ALL G+FM VA    R GK Y TVKD Q V LHPS G+   P WV+YNEFV T T YIRTC++V G WL+E AP YYDLSNFP G AK+EL R+
Sbjct:  206 MKDNLLKAYSAIVLDEAHERTLSTDVLMGLLKGVLKKRPDLKVVVMSATLDAQKFQDYFDGAPLLSVPGRVFPVDIIYSPQPEDDYVDAAIRTVISICRNEPTGDVLLFLTGEEEIEESCRKIEEELRPFERAYGPVVVLPLYGSLPPDRQQKVFADPPPPLYHGGPPGRKVICATNIAETSLTIDGVVYVVDTGFSKQKIYNPRVRVESLLVQEISRASAKQRAGRAGRTRPGKCFRLYTEESFHKHLIETTHPEILRSNLGNVVLQLKTLGIDDLVHFDFMDPPAPETLMRALELLNYLGALDDEGDLTSFGKLMSEFPLQPESSAALIRSPQFQCSNEVLTIVAMVSSAQNCFVRQKKKDKNAMRGRPPHEQFMDAEGDHLTLLNVFHAYKE---KDKERGGASQWCWDNYLNQRALRTAGNVRTQLERTMRGCNLALVSTDYQSIHYSSNIRRALLSGYFMHVAH---RNGKEYQTVKDNQKVKLHPSSGMRGNPAWVLYNEFVFTKTQYIRTCAKVEGKWLVEQAPHYYDLSNFPGGSAKEELRRL 750          
BLAST of Ggra8973.t1 vs. uniprot
Match: A0A420IP10 (RNA helicase n=4 Tax=Golovinomyces TaxID=184027 RepID=A0A420IP10_9PEZI)

HSP 1 Score: 669 bits (1727), Expect = 9.800e-233
Identity = 347/562 (61.74%), Postives = 423/562 (75.27%), Query Frame = 0
Query:    1 MHDHDLTQYSVLILDEAHERTLSTDVLMGLIKSIIKRRYDLKVIVMSATLNAEQFQTYFDNAPLLNVPGRMFPVAIHYSQSPENDYVEATIRVVTDVCRSEPPGDILVFLTGEEEIEETCHRLSSITAS--RERVDGPVQVLPLYGSLSTDRQQLVFGPPPPPLFPGGRPGRKVIVATNIAETSLTIDGVVYVVDSGFSKQKLYNPRVRVESLLVQGISRASAKQRAGRAGRTRPGKCYRLYTEDAFHKELSETTHPEILRSNLGNVVLQLKKLGVDDLVHFDFMDPPAPETMMRALELLNYLGALDDEGDLTEFGSTMSEFPLDPESAAALIHSPEYNCSEEIVSIVAMISSAGNCFVRPRHQGKRRGKYHNPHRKFQHPDGDHLTLLNVYHAYKECKARAERKYELHRWCQENLLNYRALAMADNSRLQIANIMRKCGLPLVSTSKDDRKHSENIRKALLKGFFMQVASKSFRKGKFYLTVKDQQSVLLHPSCGLGSIPQWVMYNEFVLTNTNYIRTCSQVNGTWLLELAPIYYDLSNFPDGEAKKELERMSASTRRKRS 560
            MHDHDLT+YS +ILDEAHERTL+TD+LMGL+K I  RR DLK+++MSATL+A++FQTYF+NAPLL VPGR  PV I Y+  PE DYVEA +R V  +  +EP GDIL+FLTGEEEIE+ C R+SS      RE   GP++V PLYG+L   +QQ +F P PPPL  GG PGRKVIV+TNIAETSLTIDG+VYVVD GFSKQK+YNPR+RVESLLV  IS+ASA+QRAGRAGRTRPGKC+RLYTE AF +EL E THPEILRSNL N VL+LKKLG+DDLVHFD MDPPAPET+MRALE LNYL  LDDEG+LT  G   SEFPLDP  A  LI SPE+ CS EI+S+ A++S     FVRP +  KR  +       F HPDGDHLT++NVYHA+K  +A++  K     WC ++ L+ RAL  AD+ RLQ+  IM K G+ L+ST  +D+ +  NIR+AL+ GFFMQVA K    GK Y TVKD Q+VLLHPS GLG   +WV+YNEFVLT  NY+RT + V   WLL++AP YYDL++FP G+ +  L R+S   +R++S
Sbjct:  199 MHDHDLTRYSCIILDEAHERTLATDILMGLLKEISLRRPDLKIVIMSATLDAQKFQTYFNNAPLLAVPGRTHPVEIFYTPEPERDYVEAALRTVCQIHATEPEGDILLFLTGEEEIEDACRRISSEADEMIRETDVGPMKVYPLYGTLPPQQQQKIFEPSPPPLRIGGPPGRKVIVSTNIAETSLTIDGIVYVVDPGFSKQKVYNPRIRVESLLVSPISKASAQQRAGRAGRTRPGKCFRLYTEAAFKEELIEQTHPEILRSNLANTVLELKKLGIDDLVHFDLMDPPAPETLMRALEELNYLACLDDEGELTTLGKLASEFPLDPALAVMLISSPEFYCSAEILSLTALLS-VPQIFVRPANARKRADEMKA---LFTHPDGDHLTMINVYHAFKGPEAQSNPK----EWCHKHYLSLRALQSADSVRLQLKRIMEKSGVELMSTDFNDKNYFINIRRALVSGFFMQVAKKD-STGKHYKTVKDDQNVLLHPSTGLGVESEWVVYNEFVLTTKNYVRTVTSVKPEWLLDIAPNYYDLTSFPSGDIRTALIRVSDKIKRRQS 751          
BLAST of Ggra8973.t1 vs. uniprot
Match: A0A0D2A966 (RNA helicase n=8 Tax=Herpotrichiellaceae TaxID=43219 RepID=A0A0D2A966_9EURO)

HSP 1 Score: 667 bits (1720), Expect = 1.420e-231
Identity = 346/560 (61.79%), Postives = 422/560 (75.36%), Query Frame = 0
Query:    1 MHDHDLTQYSVLILDEAHERTLSTDVLMGLIKSIIKRRYDLKVIVMSATLNAEQFQTYFDNAPLLNVPGRMFPVAIHYSQSPENDYVEATIRVVTDVCRSEPPGDILVFLTGEEEIEETCHRLS--SITASRERVDGPVQVLPLYGSLSTDRQQLVFGPPPPPLFPGGRPGRKVIVATNIAETSLTIDGVVYVVDSGFSKQKLYNPRVRVESLLVQGISRASAKQRAGRAGRTRPGKCYRLYTEDAFHKELSETTHPEILRSNLGNVVLQLKKLGVDDLVHFDFMDPPAPETMMRALELLNYLGALDDEGDLTEFGSTMSEFPLDPESAAALIHSPEYNCSEEIVSIVAMISSAGNCFVRPRHQGKRRGKYHNPHRKFQHPDGDHLTLLNVYHAYKECKARAERKYELHRWCQENLLNYRALAMADNSRLQIANIMRKCGLPLVSTSKDDRKHSENIRKALLKGFFMQVASKSFRKGKFYLTVKDQQSVLLHPSCGLGSIPQWVMYNEFVLTNTNYIRTCSQVNGTWLLELAPIYYDLSNFPDGEAKKELERMSASTRRK 558
            M+DHDL +YS +ILDEAHERTL+TDVLMGL+K ++ RR DLK+I+MSATL+A++FQ YF++APLL VPGR  PV I Y+  PE DYVEA IR V  +  +EP GDIL+FLTGEEEIE+ C ++S  +    RE   GP++V PLYG+L   +QQ +F P PPP  PGGR GRK IVATNIAETSLTIDG+VYVVD GFSKQK+YNPR+RVESLLV  IS+ASA+QRAGRAGRTRPGKC+RLYTE AF KEL E T+PE+LRSNL + VL+LKKLG+DDLVHFD MDPPAPET+MRALE LNYL  LDD+G+LT  G   SEFPLDP  A  LI SPE+ CS EI+S+VA++S     FVRP    KR  +  N    F HPDGDHLTLLNVYHA+K  +A+A  +    +WC ++ L+ RAL  ADN R+Q+  IM +  L LVST  +D+K+ ENIRKAL+ GFFMQVA K    GK Y TVKD Q+VLLHPS  LG   +WV+YNEFVLT+ NYIRT + V G WLL++AP YYD+ +FP GE +  L+R++    R+
Sbjct:  206 MNDHDLQRYSTIILDEAHERTLATDVLMGLLKEVVLRRPDLKLIIMSATLDAQKFQRYFNDAPLLAVPGRTHPVEIFYTPEPERDYVEAAIRTVLQIHATEPEGDILLFLTGEEEIEDACRKISLEADEMIREADAGPMKVYPLYGTLPPAQQQRIFEPAPPPRKPGGRAGRKCIVATNIAETSLTIDGIVYVVDPGFSKQKVYNPRIRVESLLVSPISKASAQQRAGRAGRTRPGKCFRLYTEGAFKKELIEQTYPEVLRSNLSSTVLELKKLGIDDLVHFDLMDPPAPETLMRALEELNYLACLDDDGNLTTMGKLASEFPLDPALAVMLISSPEFYCSNEILSLVALLS-VPQIFVRPASARKRADEMKN---LFAHPDGDHLTLLNVYHAFKGPEAQANTR----QWCHDHFLSLRALQSADNVRMQLKRIMEREELELVSTPFEDKKYYENIRKALVSGFFMQVAKKE-ANGKTYTTVKDNQTVLLHPSTVLGQESEWVVYNEFVLTSKNYIRTVTSVRGEWLLDIAPGYYDVDSFPKGEVRTALQRLAERVARR 756          
BLAST of Ggra8973.t1 vs. uniprot
Match: A0A2J6R9S0 (RNA helicase n=5 Tax=Helotiales TaxID=5178 RepID=A0A2J6R9S0_9HELO)

HSP 1 Score: 667 bits (1720), Expect = 1.520e-231
Identity = 348/562 (61.92%), Postives = 417/562 (74.20%), Query Frame = 0
Query:    1 MHDHDLTQYSVLILDEAHERTLSTDVLMGLIKSIIKRRYDLKVIVMSATLNAEQFQTYFDNAPLLNVPGRMFPVAIHYSQSPENDYVEATIRVVTDVCRSEPPGDILVFLTGEEEIEETCHR--LSSITASRERVDGPVQVLPLYGSLSTDRQQLVFGPPPPPLFPGGRPGRKVIVATNIAETSLTIDGVVYVVDSGFSKQKLYNPRVRVESLLVQGISRASAKQRAGRAGRTRPGKCYRLYTEDAFHKELSETTHPEILRSNLGNVVLQLKKLGVDDLVHFDFMDPPAPETMMRALELLNYLGALDDEGDLTEFGSTMSEFPLDPESAAALIHSPEYNCSEEIVSIVAMISSAGNCFVRPRHQGKRRGKYHNPHRKFQHPDGDHLTLLNVYHAYKECKARAERKYELHRWCQENLLNYRALAMADNSRLQIANIMRKCGLPLVSTSKDDRKHSENIRKALLKGFFMQVASKSFRKGKFYLTVKDQQSVLLHPSCGLGSIPQWVMYNEFVLTNTNYIRTCSQVNGTWLLELAPIYYDLSNFPDGEAKKELERMSASTRRKRS 560
            MHDH+LT+YS +ILDEAHERTL+TD+LMGL+K I  RR DLK++VMSATL+A++FQ YF++APLL VPGR  PV I Y+  PE DYVEA +R V  +  +EP GDIL+FLTGEEEIE+ C +  L +    RE   GP++V PLYG+L   +QQ +F P PPP  PGGRPGRKVIV TN+AETSLTIDG+VYVVD GFSKQK+YNPR+RVESLLV  IS+ASA+QRAGRAGRTRPGKC+RLYTE AF KEL E T+PEILRSNL N VL+LKKLGVDDLVHFD MDPPAPET+MRALE LNYL  LDD+GDLT  G   SEFPLDP  A  LI SPE+ CS EI+S+ A++S     FVRP    KR  +       F HPDGDHLT+LNVYHA+K  +A+A+ K    RWC E+ ++ RAL  ADN R Q+  IM K  L LVST  +D+ +  NIR+AL+ GFFMQVA K    GK Y TVKD QSVLLHPS  LG   +WV+YNEFVLT  NY+RT + V   WLL++AP YYDL+ FP GE +  L+R     +RK++
Sbjct:  208 MHDHNLTRYSCIILDEAHERTLATDLLMGLLKEIALRRPDLKIVVMSATLDAQKFQRYFNDAPLLAVPGRTHPVEIFYTPEPERDYVEAALRTVLQIHATEPEGDILLFLTGEEEIEDACRKITLEADEMIREADAGPLKVYPLYGNLPPQQQQRIFEPAPPPTRPGGRPGRKVIVGTNVAETSLTIDGIVYVVDPGFSKQKVYNPRIRVESLLVSPISKASAQQRAGRAGRTRPGKCFRLYTEAAFKKELIEQTYPEILRSNLANTVLELKKLGVDDLVHFDLMDPPAPETLMRALEELNYLACLDDDGDLTALGKLASEFPLDPSLAVMLISSPEFYCSNEILSLTALLS-VPQIFVRPASARKRADEMKA---LFAHPDGDHLTMLNVYHAFKGAEAQADPK----RWCHEHFISLRALQSADNVRQQLKRIMEKSELDLVSTDFNDKDYYTNIRRALVAGFFMQVAKKD-PSGKTYKTVKDDQSVLLHPSTVLGVDSEWVVYNEFVLTTKNYVRTVTAVRPEWLLDIAPTYYDLATFPKGEVRTALQRTLDKIKRKQA 760          
BLAST of Ggra8973.t1 vs. uniprot
Match: A0A6A6XXC4 (RNA helicase n=1 Tax=Melanomma pulvis-pyrius CBS 109.77 TaxID=1314802 RepID=A0A6A6XXC4_9PLEO)

HSP 1 Score: 665 bits (1717), Expect = 4.320e-231
Identity = 346/562 (61.57%), Postives = 421/562 (74.91%), Query Frame = 0
Query:    1 MHDHDLTQYSVLILDEAHERTLSTDVLMGLIKSIIKRRYDLKVIVMSATLNAEQFQTYFDNAPLLNVPGRMFPVAIHYSQSPENDYVEATIRVVTDVCRSEPPGDILVFLTGEEEIEETCHR--LSSITASRERVDGPVQVLPLYGSLSTDRQQLVFGPPPPPLFPGGRPGRKVIVATNIAETSLTIDGVVYVVDSGFSKQKLYNPRVRVESLLVQGISRASAKQRAGRAGRTRPGKCYRLYTEDAFHKELSETTHPEILRSNLGNVVLQLKKLGVDDLVHFDFMDPPAPETMMRALELLNYLGALDDEGDLTEFGSTMSEFPLDPESAAALIHSPEYNCSEEIVSIVAMISSAGNCFVRPRHQGKRRGKYHNPHRKFQHPDGDHLTLLNVYHAYKECKARAERKYELHRWCQENLLNYRALAMADNSRLQIANIMRKCGLPLVSTSKDDRKHSENIRKALLKGFFMQVASKSFRKGKFYLTVKDQQSVLLHPSCGLGSIPQWVMYNEFVLTNTNYIRTCSQVNGTWLLELAPIYYDLSNFPDGEAKKELERMSASTRRKRS 560
            MHD++LT+YS +ILDEAHERTL+TD+LMGL+K ++ RR DLK+I+MSATL+A +FQ YF +APLL VPGR  PV I Y+ +PE DYVEA +R V  +  SEP GDIL+FLTGEEEIE+ C +  L +   +RE   GP+ V PLYGSL   +QQ +F   PPPL PGG+PGRK IV+TNIAETSLTIDG+VYVVD GFSKQK+YNPR+RVESLLV  IS+ASA+QRAGRAGRTRPGKC+RLYTE AF KEL E T+PE+LRSNL + VL+LKKLGVDDLVHFD MDPPAPET+MRALE LNYL  LDDEG+LT  G   SEFPLDP  A  LI SPE+ CS EI+S+ A++S   N FVRP  Q KR  +  +    F HPDGDHLT+LNVYHA+K   A+   K    +WC ++ L+YRAL  ADN R+Q+  IM +  + L+ST  +D+K+ ENIR+AL+ GFFMQVA +    GK Y TVKD+QSVLLHPS  LG   +WV+YNEFVLT  NYIR+ + V   WLL++AP YYDLS F + E KK L+R   +  RK S
Sbjct:  208 MHDNNLTKYSTIILDEAHERTLATDILMGLLKEVVLRRKDLKLIIMSATLDATKFQKYFHSAPLLAVPGRTHPVEIFYTPAPERDYVEAALRTVLQIHASEPEGDILLFLTGEEEIEDACRKINLEAQELTREADAGPLVVYPLYGSLPPAQQQKIFNSAPPPLRPGGKPGRKCIVSTNIAETSLTIDGIVYVVDPGFSKQKVYNPRIRVESLLVSPISKASAQQRAGRAGRTRPGKCFRLYTETAFKKELIEQTYPEVLRSNLASTVLELKKLGVDDLVHFDLMDPPAPETLMRALEELNYLSCLDDEGELTALGKLASEFPLDPALAVMLITSPEFYCSNEILSLTALLS-VPNIFVRPAAQRKRADEMKD---LFAHPDGDHLTMLNVYHAFKRDDAQENPK----QWCHDHFLSYRALGQADNVRMQLKRIMERSEIDLMSTPFEDKKYYENIRRALVAGFFMQVARRD-GSGKTYTTVKDEQSVLLHPSTVLGQESEWVVYNEFVLTTKNYIRSVTAVKPEWLLDIAPNYYDLSTFKNNEIKKALQRTMNTVMRKES 760          
BLAST of Ggra8973.t1 vs. uniprot
Match: A0A5B8MIV7 (RNA helicase n=3 Tax=Chloropicon primus TaxID=1764295 RepID=A0A5B8MIV7_9CHLO)

HSP 1 Score: 662 bits (1707), Expect = 2.460e-230
Identity = 335/551 (60.80%), Postives = 421/551 (76.41%), Query Frame = 0
Query:    1 MHDHDLTQYSVLILDEAHERTLSTDVLMGLIKSIIKRRYDLKVIVMSATLNAEQFQTYFDNAPLLNVPGRMFPVAIHYSQSPENDYVEATIRVVTDVCRSEPPGDILVFLTGEEEIEETCHRLSSITASRERVDGPVQVLPLYGSLSTDRQQLVFGPPPPPLFPGGRPGRKVIVATNIAETSLTIDGVVYVVDSGFSKQKLYNPRVRVESLLVQGISRASAKQRAGRAGRTRPGKCYRLYTEDAFHKELSETTHPEILRSNLGNVVLQLKKLGVDDLVHFDFMDPPAPETMMRALELLNYLGALDDEGDLTEFGSTMSEFPLDPESAAALIHSPEYNCSEEIVSIVAMISSAGNCFVRPRHQGKRRGKYHNPHRKFQHPDGDHLTLLNVYHAYKECKARAERKYELHRWCQENLLNYRALAMADNSRLQIANIMRKCGLPLVSTSKDDRKHSENIRKALLKGFFMQVASKSFRKGKFYLTVKDQQSVLLHPSCGLGSIPQWVMYNEFVLTNTNYIRTCSQVNGTWLLELAPIYYDLSNFPDGEAKKELERM 551
            M D  L++YSV+ILDEAHERTL+TD+L GL+K I+++R DLK++VMSATL AE+FQTYF +APL+ VPGR+FPV I Y+Q PE DY+EA IR V  + + E PGD+L+FLTGEEEIEE C R+S          G   V+PLY SL   +QQ +F   P P  PGG+PGRK+IV+TNIAETSLTIDG+VYVVD GFSKQK+YNPRVRVESLLV  ISRASA QR+GRAGRTRPGKC+RLYTE++F K+L E T+PEILRSNLG+VVLQLKKLGV+DLVHFDFMDPPAPET+MRALELLNYLGALDDEG+LT+ G+ MSEFPLDP+ +  L+ SP++ CS EI+++ AM+S   NCFVRPR + +          +F H DGDH+TLLNV+HA+K+ +A  E K      C  N LNYR+L  A++ R Q+A I  +  + LVST   DR +  NIRKA++ G+FMQVA    + GK Y TVKD + V+LHPSC LG+ P+WV+Y+EFVLT+ +YIRTC  + G WL+++AP Y+DLSNFP   A++ LER+
Sbjct:  165 MTDPQLSRYSVIILDEAHERTLATDILFGLLKEILEKRKDLKLVVMSATLEAEKFQTYFIDAPLIKVPGRLFPVEIFYTQEPERDYLEAAIRTVLQIHQHEDPGDVLLFLTGEEEIEEACRRISREAYDMGETAGEAMVIPLYSSLPPAQQQRIFAKAPEPKGPGGKPGRKIIVSTNIAETSLTIDGIVYVVDPGFSKQKVYNPRVRVESLLVTPISRASAHQRSGRAGRTRPGKCFRLYTENSFQKDLQEQTYPEILRSNLGSVVLQLKKLGVEDLVHFDFMDPPAPETLMRALELLNYLGALDDEGELTQIGAVMSEFPLDPQLSKMLVASPQFKCSNEILTVTAMLS-VPNCFVRPRDKAREADAAKE---QFVHSDGDHMTLLNVFHAFKQWQATGEEKD----MCYNNWLNYRSLKSAESVRDQLARICNRLNVNLVSTDFSDRYYYINIRKAIVSGYFMQVAHME-KSGK-YQTVKDNELVMLHPSCVLGNKPEWVLYHEFVLTSRHYIRTCIDIEGDWLVDIAPHYFDLSNFPVCAARRSLERL 705          
BLAST of Ggra8973.t1 vs. uniprot
Match: A0A0F4YV10 (RNA helicase n=8 Tax=Eurotiales TaxID=5042 RepID=A0A0F4YV10_TALEM)

HSP 1 Score: 662 bits (1708), Expect = 8.990e-230
Identity = 346/560 (61.79%), Postives = 415/560 (74.11%), Query Frame = 0
Query:    1 MHDHDLTQYSVLILDEAHERTLSTDVLMGLIKSIIKRRYDLKVIVMSATLNAEQFQTYFDNAPLLNVPGRMFPVAIHYSQSPENDYVEATIRVVTDVCRSEPPGDILVFLTGEEEIEETCHRLS--SITASRERVDGPVQVLPLYGSLSTDRQQLVFGPPPPPLFPGGRPGRKVIVATNIAETSLTIDGVVYVVDSGFSKQKLYNPRVRVESLLVQGISRASAKQRAGRAGRTRPGKCYRLYTEDAFHKELSETTHPEILRSNLGNVVLQLKKLGVDDLVHFDFMDPPAPETMMRALELLNYLGALDDEGDLTEFGSTMSEFPLDPESAAALIHSPEYNCSEEIVSIVAMISSAGNCFVRPRHQGKRRGKYHNPHRKFQHPDGDHLTLLNVYHAYKECKARAERKYELHRWCQENLLNYRALAMADNSRLQIANIMRKCGLPLVSTSKDDRKHSENIRKALLKGFFMQVASKSFRKGKFYLTVKDQQSVLLHPSCGLGSIPQWVMYNEFVLTNTNYIRTCSQVNGTWLLELAPIYYDLSNFPDGEAKKELERMSASTRRK 558
            M+DHDL +YS +ILDEAHERT++TDVLMGL+K I+KRR DLK+I+MSATL+A++FQ YF++APLL VPGR  PV I Y+  PE DYVEA IR V  +  +EP GDIL+FLTGEEEIE+   ++S  +    RE   GP++V PLYGSL    QQ +F PPP P  PGGRPGRK IV+TNIAETSLTIDG+VYVVD GFSKQK+YNPR+RVESLLV  IS+ASA+QRAGRAGRTRPGKC+RLYTE AF KEL + T+PEILRSNL + VL+LKKLG+DDLVHFD MDPPAPET+MRALE LNYL  LDD+G+LT  G   SEFPLDP  A  LI SPE+ CS EI+SI A++S     FVRP  Q KR  +  N    F HPDGDHLTLLNVYHA+K  +A+A  K    +WC ++ L+ R+L  ADN R Q+  IM +  + LVST  +D+K+ ENIR+AL+ GFFMQVA K  +    Y TVKD Q VLLHPS  LG   +WV+YNEFVLT  NYIRT + V   WLLE+AP YYD+S FP GE +  L R +    RK
Sbjct:  200 MNDHDLKRYSTIILDEAHERTMATDVLMGLLKEIVKRRPDLKIIIMSATLDAQKFQRYFNDAPLLAVPGRTHPVEIFYTPEPEQDYVEAAIRTVLQIHATEPEGDILLFLTGEEEIEDAARKISLEADEMVREADAGPLKVYPLYGSLPPHMQQRIFEPPPQPRKPGGRPGRKCIVSTNIAETSLTIDGIVYVVDPGFSKQKVYNPRIRVESLLVSPISKASAQQRAGRAGRTRPGKCFRLYTEAAFKKELIDQTYPEILRSNLSSTVLELKKLGIDDLVHFDLMDPPAPETLMRALEELNYLACLDDDGNLTALGRLASEFPLDPALAVMLISSPEFYCSNEILSITALLS-VPQIFVRPHSQRKRADEMKN---LFAHPDGDHLTLLNVYHAFKSPEAQANPK----QWCHDHFLSLRSLQAADNVRQQLLRIMEREEIELVSTPFEDKKYYENIRRALVAGFFMQVAKKDSQGKNMYTTVKDNQHVLLHPSTVLGYDAEWVLYNEFVLTTKNYIRTVTSVKPEWLLEIAPNYYDISTFPKGEVRSALLRTAERLARK 751          
BLAST of Ggra8973.t1 vs. uniprot
Match: R1GVD1 (RNA helicase n=3 Tax=Botryosphaeriales TaxID=451869 RepID=R1GVD1_BOTPV)

HSP 1 Score: 661 bits (1706), Expect = 9.570e-230
Identity = 338/560 (60.36%), Postives = 422/560 (75.36%), Query Frame = 0
Query:    1 MHDHDLTQYSVLILDEAHERTLSTDVLMGLIKSIIKRRYDLKVIVMSATLNAEQFQTYFDNAPLLNVPGRMFPVAIHYSQSPENDYVEATIRVVTDVCRSEPPGDILVFLTGEEEIEETCHRLS--SITASRERVDGPVQVLPLYGSLSTDRQQLVFGPPPPPLFPGGRPGRKVIVATNIAETSLTIDGVVYVVDSGFSKQKLYNPRVRVESLLVQGISRASAKQRAGRAGRTRPGKCYRLYTEDAFHKELSETTHPEILRSNLGNVVLQLKKLGVDDLVHFDFMDPPAPETMMRALELLNYLGALDDEGDLTEFGSTMSEFPLDPESAAALIHSPEYNCSEEIVSIVAMISSAGNCFVRPRHQGKRRGKYHNPHRKFQHPDGDHLTLLNVYHAYKECKARAERKYELHRWCQENLLNYRALAMADNSRLQIANIMRKCGLPLVSTSKDDRKHSENIRKALLKGFFMQVASKSFRKGKFYLTVKDQQSVLLHPSCGLGSIPQWVMYNEFVLTNTNYIRTCSQVNGTWLLELAPIYYDLSNFPDGEAKKELERMSASTRRK 558
            M+DH L++YS +ILDEAHERTL+TD+LMGL+K +++RR DLK+++MSATL+A++FQ YF++APLL VPGR  PV I Y+  PE DYVEA +R V  +  SEP GD+L+FLTGEEEIE+ C ++S  +   +RE   GP++V PLYG+L   +QQ +F P PPP  PGGRPGRKVIV+TNIAETSLTIDG+VYVVD GFSKQK+YNPR+RVESLLV  IS+ASA+QRAGRAGRTRPGKC+RLYTE AF KEL E T+PEILRSNL   VL+LKKLGV+DLVHFD MDPPAPET+MRALE LNYL  LDDEG+LT  G   S+FPLDP  A  LI +PE+ CS EI+S+VA++S     FVRP    KR  +  +    F HPDGDHLT+LNVYHA+K   A+A  K    +WC ++ L+YRAL  ADN RLQ+  IM +  + L+ST  +D+K+ ENIR+AL+ GFFMQVA +    GK Y+T+KD Q+VLLHPS  LG   +WV+YNEFVLT  NYIRT + V   WLL++AP YYD++ F  G+ K  L+R     RR+
Sbjct:  186 MNDHSLSRYSTIILDEAHERTLATDILMGLLKEVVQRRPDLKLVIMSATLDAQKFQRYFNDAPLLAVPGRTHPVEIFYTAEPERDYVEAALRTVLQIHASEPEGDVLLFLTGEEEIEDACRKISLEADELTREADAGPLKVYPLYGTLPPHQQQKIFEPAPPPRTPGGRPGRKVIVSTNIAETSLTIDGIVYVVDPGFSKQKVYNPRIRVESLLVSPISKASAQQRAGRAGRTRPGKCFRLYTESAFKKELIEQTYPEILRSNLSATVLELKKLGVEDLVHFDLMDPPAPETLMRALEELNYLACLDDEGELTALGRLASDFPLDPALAVMLISAPEFYCSNEILSLVALLS-VPQIFVRPASARKRADEMKD---LFAHPDGDHLTMLNVYHAFKSDDAQANPK----QWCHDHFLSYRALQQADNVRLQLKRIMERSEIELMSTPFEDKKYYENIRRALVSGFFMQVAKRD-GTGKTYITIKDDQNVLLHPSTVLGHDSEWVVYNEFVLTTKNYIRTVTSVKPEWLLDIAPNYYDIATFKKGDIKNALQRTVDKMRRR 736          
BLAST of Ggra8973.t1 vs. uniprot
Match: A0A6A6U8P7 (RNA helicase n=1 Tax=Microthyrium microscopicum TaxID=703497 RepID=A0A6A6U8P7_9PEZI)

HSP 1 Score: 660 bits (1703), Expect = 2.460e-229
Identity = 343/560 (61.25%), Postives = 424/560 (75.71%), Query Frame = 0
Query:    1 MHDHDLTQYSVLILDEAHERTLSTDVLMGLIKSIIKRRYDLKVIVMSATLNAEQFQTYFDNAPLLNVPGRMFPVAIHYSQSPENDYVEATIRVVTDVCRSEPPGDILVFLTGEEEIEETCHRLS-SITASRERVD-GPVQVLPLYGSLSTDRQQLVFGPPPPPLFPGGRPGRKVIVATNIAETSLTIDGVVYVVDSGFSKQKLYNPRVRVESLLVQGISRASAKQRAGRAGRTRPGKCYRLYTEDAFHKELSETTHPEILRSNLGNVVLQLKKLGVDDLVHFDFMDPPAPETMMRALELLNYLGALDDEGDLTEFGSTMSEFPLDPESAAALIHSPEYNCSEEIVSIVAMISSAGNCFVRPRHQGKRRGKYHNPHRKFQHPDGDHLTLLNVYHAYKECKARAERKYELHRWCQENLLNYRALAMADNSRLQIANIMRKCGLPLVSTSKDDRKHSENIRKALLKGFFMQVASKSFRKGKFYLTVKDQQSVLLHPSCGLGSIPQWVMYNEFVLTNTNYIRTCSQVNGTWLLELAPIYYDLSNFPDGEAKKELERMSASTRRK 558
            M+D++L++YSVLILDEAHERTL+TD+LMGL+K + KRR DLK+I+MSATL+A++FQ YF++APLL VPGR  PV I+Y+   ENDYVEA IR V  +  +EP GDILVFLTGEEEIE+TC ++   +    +  D GP++V PLYGSLS  +QQ +F P PPP   GGRPGRK I++TNIAETSLTIDG+VYVVD GFSKQK+YNPR+RVESLLV  IS+ASA+QRAGRAGRTRPGKC+RLYTE AF KEL E T+PE+LRSNL   VLQLKKLG+DDLVHFD MDPPAPET+MRALE LNYL  LDDEG+LT  G   S FPLDP  A  LI SPE+ CS EI+S+ A++S   N FVRP    KR  +  N    F HPDGDHLTLLNVYHA+K  +A++  K    +WC ++ L+YR+L  AD+ R+Q++ IM +  + L+ST  +D+K+ ENIR+AL+ GFFMQVA +    GK Y TV D QSVLLHPS  L S  +WV+Y+EFVLT+ NYIRT + VN  WLL++AP+YYDL NF  GE K  L++     RR+
Sbjct:  184 MNDNNLSRYSVLILDEAHERTLATDILMGLLKEVAKRRPDLKIIIMSATLDAQKFQRYFNDAPLLAVPGRTHPVEIYYTTQAENDYVEAAIRTVLQIHATEPKGDILVFLTGEEEIEDTCRKIELGVDDLIQDADAGPMKVYPLYGSLSPQQQQRIFDPAPPPRTAGGRPGRKCIISTNIAETSLTIDGIVYVVDPGFSKQKVYNPRIRVESLLVSPISKASAQQRAGRAGRTRPGKCFRLYTEAAFKKELIEQTYPELLRSNLSMTVLQLKKLGIDDLVHFDLMDPPAPETLMRALEELNYLACLDDEGELTSLGRLASNFPLDPALAVMLISSPEFYCSNEILSLTALLS-VPNVFVRPSSNRKRADEMKN---LFAHPDGDHLTLLNVYHAFKSPQAQSNAK----QWCHDHFLSYRSLQQADDVRMQLSRIMEREEIELMSTPFEDKKYYENIRRALVAGFFMQVAKRE-SSGKTYSTV-DNQSVLLHPSTVLSSEAEWVLYSEFVLTSKNYIRTITSVNAEWLLDIAPVYYDLDNFSKGELKTALQKTMDKMRRR 733          
The following BLAST results are available for this feature:
BLAST of Ggra8973.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3ID945.610e-31277.17RNA helicase n=1 Tax=Gracilariopsis chorda TaxID=4... [more]
R7QGQ71.590e-25967.70Predicted pre-mRNA splicing factor ATP-dependent R... [more]
A0A420IP109.800e-23361.74RNA helicase n=4 Tax=Golovinomyces TaxID=184027 Re... [more]
A0A0D2A9661.420e-23161.79RNA helicase n=8 Tax=Herpotrichiellaceae TaxID=432... [more]
A0A2J6R9S01.520e-23161.92RNA helicase n=5 Tax=Helotiales TaxID=5178 RepID=A... [more]
A0A6A6XXC44.320e-23161.57RNA helicase n=1 Tax=Melanomma pulvis-pyrius CBS 1... [more]
A0A5B8MIV72.460e-23060.80RNA helicase n=3 Tax=Chloropicon primus TaxID=1764... [more]
A0A0F4YV108.990e-23061.79RNA helicase n=8 Tax=Eurotiales TaxID=5042 RepID=A... [more]
R1GVD19.570e-23060.36RNA helicase n=3 Tax=Botryosphaeriales TaxID=45186... [more]
A0A6A6U8P72.460e-22961.25RNA helicase n=1 Tax=Microthyrium microscopicum Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007502Helicase-associated domainSMARTSM00847ha2_5coord: 293..387
e-value: 5.6E-28
score: 108.9
IPR007502Helicase-associated domainPFAMPF04408HA2coord: 294..386
e-value: 6.4E-21
score: 74.6
IPR001650Helicase, C-terminalSMARTSM00490helicmild6coord: 114..232
e-value: 2.0E-12
score: 57.3
IPR001650Helicase, C-terminalPFAMPF00271Helicase_Ccoord: 98..231
e-value: 2.2E-10
score: 40.9
IPR001650Helicase, C-terminalPROSITEPS51194HELICASE_CTERcoord: 90..273
score: 16.598736
NoneNo IPR availableGENE3D1.20.120.1080coord: 277..444
e-value: 2.1E-26
score: 93.9
NoneNo IPR availablePANTHERPTHR18934:SF217PRE-MRNA-SPLICING FACTOR ATP-DEPENDENT RNA HELICASE DEAH3-RELATEDcoord: 1..559
NoneNo IPR availablePANTHERPTHR18934ATP-DEPENDENT RNA HELICASEcoord: 1..559
NoneNo IPR availableCDDcd18791SF2_C_RHAcoord: 72..240
e-value: 1.13462E-74
score: 232.809
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 1..70
e-value: 3.1E-28
score: 100.5
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 71..253
e-value: 6.5E-70
score: 236.4
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 1..435
IPR011709Domain of unknown function DUF1605PFAMPF07717OB_NTP_bindcoord: 455..531
e-value: 2.5E-17
score: 63.0
IPR002464DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved sitePROSITEPS00690DEAH_ATP_HELICASEcoord: 10..19
IPR014001Helicase superfamily 1/2, ATP-binding domainPROSITEPS51192HELICASE_ATP_BIND_1coord: 1..68
score: 11.665964

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000860_piloncontigtig00000860_pilon:1023559..1025253 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra8973.t1Ggra8973.t1Gracilaria gracilis GNS1m malemRNAtig00000860_pilon 1023559..1025253 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra8973.t1 ID=Ggra8973.t1|Name=Ggra8973.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=565bp
MHDHDLTQYSVLILDEAHERTLSTDVLMGLIKSIIKRRYDLKVIVMSATL
NAEQFQTYFDNAPLLNVPGRMFPVAIHYSQSPENDYVEATIRVVTDVCRS
EPPGDILVFLTGEEEIEETCHRLSSITASRERVDGPVQVLPLYGSLSTDR
QQLVFGPPPPPLFPGGRPGRKVIVATNIAETSLTIDGVVYVVDSGFSKQK
LYNPRVRVESLLVQGISRASAKQRAGRAGRTRPGKCYRLYTEDAFHKELS
ETTHPEILRSNLGNVVLQLKKLGVDDLVHFDFMDPPAPETMMRALELLNY
LGALDDEGDLTEFGSTMSEFPLDPESAAALIHSPEYNCSEEIVSIVAMIS
SAGNCFVRPRHQGKRRGKYHNPHRKFQHPDGDHLTLLNVYHAYKECKARA
ERKYELHRWCQENLLNYRALAMADNSRLQIANIMRKCGLPLVSTSKDDRK
HSENIRKALLKGFFMQVASKSFRKGKFYLTVKDQQSVLLHPSCGLGSIPQ
WVMYNEFVLTNTNYIRTCSQVNGTWLLELAPIYYDLSNFPDGEAKKELER
MSASTRRKRSRVDR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007502Helicase-assoc_dom
IPR001650Helicase_C
IPR027417P-loop_NTPase
IPR011709DUF1605
IPR002464DNA/RNA_helicase_DEAH_CS
IPR014001Helicase_ATP-bd