Ggra3288.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra3288.t1
Unique NameGgra3288.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length243
Homology
The following BLAST results are available for this feature:
BLAST of Ggra3288.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 204..236
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 39..85
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 168..242
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 182..201
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 42..62
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..14
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..21
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 22..242
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..21

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000851_piloncontigtig00000851_pilon:427127..427855 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra3288.t1Ggra3288.t1Gracilaria gracilis GNS1m malemRNAtig00000851_pilon 427127..427855 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra3288.t1 ID=Ggra3288.t1|Name=Ggra3288.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=243bp
MINLVVRFLAFLPFMPTACIAQLPLPPLAAGPLRVFESEIADPAQPQNSN
VNRNNNSPMHPPTRRVRQGEQPPAPLKSFLRHPADSETTDGLHDFFSSMQ
PTALTTAHDEQELSLMPESMPEQLTEIALEEQLQPSLFQHVPVIVVDSHK
SSTVEQTNAADLDSAAASATNGATVPNPGEAVETDHDIDPSPEERDVGKD
NGLNGTRAQASYYSAQETELQIDSSESTANQDPSEQLTEEIK*
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