Ggra3268.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra3268.t1
Unique NameGgra3268.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length284
Homology
BLAST of Ggra3268.t1 vs. uniprot
Match: A0A2V3IG38 (L-ascorbate peroxidase 5, peroxisomal n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IG38_9FLOR)

HSP 1 Score: 166 bits (420), Expect = 3.620e-46
Identity = 102/261 (39.08%), Postives = 151/261 (57.85%), Query Frame = 0
Query:   28 SSHDDVRAILRRRLRRNQSLIPAFVRTAFHDCIAASDKQPASGCNGSIRLHAERYNALNEAVRPVLQLLDGVLRA---RKCVSYADAIMIGTEEALVLAQGPDLRERLVRY---RADVHEVDTEP--LPDIGMGLSEMRRFFARRKLSKRTMVASVVGGHSLGHFL--RSGRLEPFTPSLHVFDNQFAVNLQQKVNNRVNLDGFNTLPSDDVLLTDKRIVSLIQLYAGVNGKDGGVDRGIGLRLLRTDFARFMIRLSRLRG 278
            SSH  +R ++++ ++ +  LIPAF R AFHDCI A+  +P SGCNGS+RL  E  N  N+ ++P L  L   L     +KC S+AD I +G E A+ ++ GP +  +LV     R DV + DT    LPD      ++  F+AR+  + R MV S VGGH+LG F      + +PFT +   F+  +AVNL Q+++   NL+GF+TL SD  LL +   V  ++ YAG  G   G    +G   L TD+ +F+I+L+ L+G
Sbjct:   38 SSHQKIREVIKKGMKDDPDLIPAFSRAAFHDCITATSSKPNSGCNGSLRLEEEITNMNNDRLQPPLDFLRQHLPTIAHKKCASFADGIQLGAEVAMQISGGPKVLGKLVNSAAPRVDVDDPDTVEGELPDEDDPFPKLLDFYARKGFNLREMVVSNVGGHALGAFEDDEDNQEKPFTTTETSFNIDYAVNLVQRIDTGKNLEGFHTLNSDLELLNNTESVFWLKYYAGHTGV--GYVPSLGKLRLLTDYGKFLIKLASLKG 296          
BLAST of Ggra3268.t1 vs. uniprot
Match: peroxidase 16 n=1 Tax=Tarenaya hassleriana TaxID=28532 RepID=UPI00053C13D9 (peroxidase 16 n=1 Tax=Tarenaya hassleriana TaxID=28532 RepID=UPI00053C13D9)

HSP 1 Score: 65.9 bits (159), Expect = 1.060e-8
Identity = 67/258 (25.97%), Postives = 112/258 (43.41%), Query Frame = 0
Query:   33 VRAILRRRLRRNQSLIPAFVRTAFHDCIAASDKQPASGCNGSIRL-------HAERYNALNEAVRPVL---QLLDGVLRARKCVSYADAIMIGTEEALVLAQGPDLRERLVRYRADVHEVDT--EPLPDIGMGLSEMRRFFARRKLSKRTMVASVVGGHSLGHFLRSG----RLEPFTPSLHV---FDNQFAVNLQQ----KVNNRV--NLD-----------------GFNTLPSDDVLLTDKRIVSLIQLYAGVNG 248
            VR  +R++ ++     PA +R  FHDC          GC+ SI +       H ++ +   +    V+   Q +D     R  VS AD + + T E ++L  GP+    L R    +  V +    LP  G  L ++   F+R  LS+  M+A + G H++G F   G    R+  F+P   +    + ++A+ L+Q    +V+ R+  N+D                 G     SD +L TD+R  S + L+A   G
Sbjct:   45 VRNAVRQKFQQTFVTAPATLRLFFHDCFVR-------GCDASILIASPSEKDHPDQLSLAGDGFDTVVKAKQAVDSNPNCRNKVSCADVLALATREVVLLTGGPNYPVELGRRDGRLSTVASVQHSLPQPGFNLDQLNSMFSRHGLSQTDMIA-LSGAHTIG-FSHCGKFSKRIYNFSPKNRIDPTLNLRYALQLRQMCPVRVDPRIAINMDPTTPRTFDNAYFKNLQQGMGLFSSDQILFTDQRSRSTVNLFASNEG 293          
BLAST of Ggra3268.t1 vs. uniprot
Match: A0A7N2MVI0 (Peroxidase n=2 Tax=Quercus TaxID=3511 RepID=A0A7N2MVI0_QUELO)

HSP 1 Score: 65.1 bits (157), Expect = 1.890e-8
Identity = 67/285 (23.51%), Postives = 115/285 (40.35%), Query Frame = 0
Query:    6 LLVVAFTATLAWYARAHARVKCSSHDD-VRAILRRRLRRNQSLIPAFVRTAFHDCIAASDKQPASGCNGSIRL-------HAERYNALNEAVRPVLQLLDGVLRARKC---VSYADAIMIGTEEALVLAQGPDLRERLVRYRADVHEVDT--EPLPDIGMGLSEMRRFFARRKLSKRTMVASVVGGHSLG------------HFLRSGRLEPFTPSLHVF----------DNQFAVNLQQKVNNRVNLDGFNTLP-------SDDVLLTDKRIVSLIQLYAGVNG 248
            LL +  T T A   R   +  C + +  VR+ + ++ ++     PA +R  FHDC          GC+ S+ +       H +  +   +    V++    V R  +C   VS AD + + T + +VLA GP     L R    +    +    LP     L ++   F+   L++  M+A + G H++G            +F    R++P   S +            D + A+N+     NR +   +  L        SD++L TD R  S + L+A  NG
Sbjct:   13 LLALLLTTTSAQLRRDFYKNTCPNVESLVRSAVTKKFQQTFVTAPATLRLFFHDCFVR-------GCDASVLIASPSEKDHPDDLSLAGDGFDTVVKAKAAVDRDSRCTNKVSCADILALATRDVVVLAGGPSYTVELGRRDGRISTAASVQRHLPHPDFNLDQLNSMFSSNGLTQTDMIA-LSGAHTIGFSHCGRFSNRIYNFSPKSRIDPTLNSAYALQLRQMCPINVDPRIAINMDPTTPNRFDNAYYKNLQQGKGLFGSDEILFTDTRSKSTVNLFASNNG 289          
BLAST of Ggra3268.t1 vs. uniprot
Match: A0A8J4VL89 (Uncharacterized protein n=1 Tax=Castanea mollissima TaxID=60419 RepID=A0A8J4VL89_9ROSI)

HSP 1 Score: 59.7 bits (143), Expect = 1.710e-6
Identity = 62/257 (24.12%), Postives = 108/257 (42.02%), Query Frame = 0
Query:   33 VRAILRRRLRRNQSLIPAFVRTAFHDCIAASDKQPASGCNGSIRL-------HAERYNALNEAVRPVLQLLDGVLRARKC---VSYADAIMIGTEEALVLAQGPDLRERLVRYRADVHEVD--TEPLPDIGMGLSEMRRFFARRKLSKRTMVASVVGGHSLG--HFLR-SGRLEPFTPSLHV---FDNQFAVNLQQ----KVNNRVNLDGFNTLP-------------------SDDVLLTDKRIVSLIQLYAGVNG 248
            VR+ + ++ ++     PA +R  FHDC          GC+ S+ +       H +  +   +    V++    V    +C   VS AD + + T + +VLA GP     L R    +         LP     L ++   F+   L++  M+A + G H++G  H  R S R+  F+P   +    ++ +A+ L+Q     V+ R+ ++   T P                   SD++L TD R  S + L+A  NG
Sbjct:  169 VRSAVTKKFQQTFVTAPATLRLFFHDCFVR-------GCDASVLIASPSEKDHPDDLSLAGDGFDTVIKAKAAVDSDSRCANKVSCADILALATRDVVVLAGGPSYTVELGRRDGRISTAAGVQRHLPQPNFNLDQLNAMFSSNGLTQTDMIA-LSGAHTIGFSHCGRFSNRIYKFSPKSRIDPTLNSAYALQLRQMCPINVDPRIAINMDPTTPNTFDNAYYKNLQQGKGLFSSDEILFTDTRSKSTVNLFASNNG 417          
BLAST of Ggra3268.t1 vs. uniprot
Match: J3MH57 (Peroxidase n=1 Tax=Oryza brachyantha TaxID=4533 RepID=J3MH57_ORYBR)

HSP 1 Score: 59.3 bits (142), Expect = 1.930e-6
Identity = 64/260 (24.62%), Postives = 109/260 (41.92%), Query Frame = 0
Query:   33 VRAILRRRLRRNQSLIPAFVRTAFHDCIAASDKQPASGCNGSIRL-----HAERYNALNEAVRP--------VLQLLDGVLRARKCVSYADAIMIGTEEALVLAQGPDLRERLVRYRADVHEVDTEPLPDIGMGLSEMRRFFARRKLSKRTMVASVVGGHSLG-------------------HFLRSGR------------LEPFTPSLHVFDNQFAVNLQQKVNNRVNLDGFNTLPSDDVLLTDKRIVSLIQLYAGVNG 248
            VR  ++R ++++    PA +R  FHDC          GC+ SI +       E  +  N++++P            +D   + +  VS AD + + T +++ L+ GP+    L R+ + V   ++  LP     L ++  +F    LS   M+A + GGH++G                   +F+ + R            L+  +P    FDN F  NL+          G   L SD +L +D R  SL+ +YAG  G
Sbjct:   88 VRGSVQRSMQQSPISAPATLRLFFHDCAV-------QGCDASILIINPNGDDEWRSTDNQSLKPEGFLTVMAAKAAVDSDPQCKNKVSCADILALATRDSVFLSGGPNYAVELGRFDSRVSTRNSVNLPHGNFNLDQLTGYFGSLGLSPTDMIA-LSGGHTIGAASCGFFGYRLGSDPTMDPNFVSTLRGNCAAGSGGFAFLDAASPLR--FDNAFYQNLR---------GGRGLLGSDQILYSDPRSRSLVDVYAGNQG 328          
The following BLAST results are available for this feature:
BLAST of Ggra3268.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A2V3IG383.620e-4639.08L-ascorbate peroxidase 5, peroxisomal n=1 Tax=Grac... [more]
peroxidase 16 n=1 Tax=Tarenaya hassleriana TaxID=28532 RepID=UPI00053C13D91.060e-825.97peroxidase 16 n=1 Tax=Tarenaya hassleriana TaxID=2... [more]
A0A7N2MVI01.890e-823.51Peroxidase n=2 Tax=Quercus TaxID=3511 RepID=A0A7N2... [more]
A0A8J4VL891.710e-624.12Uncharacterized protein n=1 Tax=Castanea mollissim... [more]
J3MH571.930e-624.62Peroxidase n=1 Tax=Oryza brachyantha TaxID=4533 Re... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002016Haem peroxidasePRINTSPR00458PEROXIDASEcoord: 193..208
score: 31.47
coord: 171..186
score: 24.51
coord: 48..62
score: 34.27
coord: 106..123
score: 30.9
IPR002016Haem peroxidasePFAMPF00141peroxidasecoord: 33..244
e-value: 2.3E-21
score: 76.5
IPR002016Haem peroxidasePROSITEPS50873PEROXIDASE_4coord: 33..283
score: 14.966529
IPR002207Class I peroxidasePRINTSPR00459ASPEROXIDASEcoord: 66..76
score: 31.12
coord: 105..123
score: 25.1
coord: 48..63
score: 28.37
coord: 146..163
score: 33.33
coord: 216..241
score: 31.51
NoneNo IPR availableGENE3D1.10.420.10Peroxidase, domain 2coord: 150..250
e-value: 4.7E-10
score: 42.0
NoneNo IPR availableGENE3D1.10.520.10coord: 17..149
e-value: 9.2E-18
score: 66.3
NoneNo IPR availablePIRSRPIRSR600823-3PIRSR600823-3coord: 31..183
e-value: 6.9E-10
score: 36.1
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..4
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 17..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 5..16
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 22..283
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..21
NoneNo IPR availableCDDcd00314plant_peroxidase_likecoord: 31..249
e-value: 1.04938E-27
score: 105.699
IPR044831Heme-binding peroxidase Ccp1-likePANTHERPTHR31356THYLAKOID LUMENAL 29 KDA PROTEIN, CHLOROPLASTIC-RELATEDcoord: 28..244
IPR010255Haem peroxidase superfamilySUPERFAMILY48113Heme-dependent peroxidasescoord: 26..277

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000851_piloncontigtig00000851_pilon:170768..171619 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra3268.t1Ggra3268.t1Gracilaria gracilis GNS1m malemRNAtig00000851_pilon 170768..171619 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra3268.t1 ID=Ggra3268.t1|Name=Ggra3268.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=284bp
MRVRLLLVVAFTATLAWYARAHARVKCSSHDDVRAILRRRLRRNQSLIPA
FVRTAFHDCIAASDKQPASGCNGSIRLHAERYNALNEAVRPVLQLLDGVL
RARKCVSYADAIMIGTEEALVLAQGPDLRERLVRYRADVHEVDTEPLPDI
GMGLSEMRRFFARRKLSKRTMVASVVGGHSLGHFLRSGRLEPFTPSLHVF
DNQFAVNLQQKVNNRVNLDGFNTLPSDDVLLTDKRIVSLIQLYAGVNGKD
GGVDRGIGLRLLRTDFARFMIRLSRLRGRRLTD*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002016Haem_peroxidase
IPR002207Peroxidase_I
IPR044831Ccp1-like
IPR010255Haem_peroxidase_sf