Ggra3727.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra3727.t1
Unique NameGgra3727.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length662
Homology
BLAST of Ggra3727.t1 vs. uniprot
Match: A0A2V3IUU0 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IUU0_9FLOR)

HSP 1 Score: 523 bits (1347), Expect = 3.710e-175
Identity = 282/522 (54.02%), Postives = 385/522 (73.75%), Query Frame = 0
Query:  144 EAKGHTEDGLHLNGNHSHEQSLDLEERKLKSASNKLVKWLRNRLRKRLADVAHLESDMTTERELLKTLNDEIEDASREREDEIKQKLQTKKELSDFRRHSNSPNAGMKRVQSQTKALSEQLERVKEAYESMIARHKDLETKLKHSGFAHWLEARGSDYFPDTAIGVLSKSAQILGPVSHGFQRALLFDDQLSTEMEQIVPGSDETILHKIVWDITMMVPFIPFILLLRLGNGMIHRLSVYDIVLCGSGLFAAECALCFVMSVFFSREILGVCQEINETILITLLFTNALIYFVSLVAQILISCLRPSRTEVVQVILLFTVGCRYYQYVFRPVMLSKPVMVTILSHVLYIITFSLIFIEKKRAMNFKTSYDVYCYKTMAILKAWVSETGNAMRNMFSDVLPYGSRSYTESGYGSRSSFYASVSNGDVNSELNGEMSTEAIEPLEYKQVPRT----QQGTDYFGQNKWYPVNRSASLIRKTFTASQEYGDRMNSNSANSNKLGRGQKRSNSGSDDSVAYQSCME 661
            ++K H  +  H+ G  + E+ LD EE+KLK A+NKLVKWLRNRLRKRL DVA+LE +MTTE  LL+ L  EI+D S ER+ EI++K+ T+KELS+FRRHS SP+A M+RV+SQT ALSEQ       YESM ARHKDL+ KL+ +G  HWLEARG +YFP+TA+GVLSKSAQILGPV+HGFQ+ +  DD LS ++E+++ GSDE +   IVWD+TM++PF+PF+ LLR+ +   H +S++ IVLCGS LFAAE  + F++SVF  +E+L V Q++NETIL+ L+  NA++Y + L +Q+LISCL  SR E +QVIL+FT+G RYY +VF+P ML +P+M+T++SH+++I+TFSL+FIEKKR +++KT YD+Y  K +   K WV +T  AM N+FSD++P+GSR+ T S YGS++S YAS          +G+ S + I+P+  +   RT    Q+ + Y G N+WY VNRSASLIRKTFTASQ YGD M+S   ++ K G  Q+   S S++S AYQSC E
Sbjct:  154 DSKTHVAESRHVEGTATQERELDAEEQKLKLATNKLVKWLRNRLRKRLEDVANLEHEMTTENVLLENLESEIKDTSEERKSEIREKIATQKELSEFRRHSTSPDATMERVKSQTTALSEQXXXXXXXYESMAARHKDLKDKLRSAGLTHWLEARGKEYFPETAVGVLSKSAQILGPVTHGFQKVVSLDDMLSRKVERVMHGSDEGMYGSIVWDLTMLIPFVPFLCLLRVADHAFHHVSMFHIVLCGSALFAAESFISFILSVFLGKEVLSVTQKVNETILVALVLLNAVLYTLVLFSQVLISCLHSSRNEGIQVILMFTIGYRYYYHVFQPAMLGRPIMITLMSHIVHILTFSLVFIEKKRLLDYKTPYDLYFNKLILGTKDWVMDTFQAMLNVFSDIVPHGSRART-SEYGSQTS-YAST--------FDGDHSFQTIKPVSEEDEQRTVSLLQENSRYLGHNRWYEVNRSASLIRKTFTASQLYGDHMHSTVKSTGK-GTAQETCRSSSNNSAAYQSCRE 664          
The following BLAST results are available for this feature:
BLAST of Ggra3727.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IUU03.710e-17554.02Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 250..284
NoneNo IPR availableCOILSCoilCoilcoord: 158..185
NoneNo IPR availableCOILSCoilCoilcoord: 194..235
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 626..661
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 144..169
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 114..169
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..4
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 454..470
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 374..384
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 385..407
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 353..373
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 448..453
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 25..352
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 408..421
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 471..481
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 5..16
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..24
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 501..661
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 17..24
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 482..500
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 422..447
NoneNo IPR availableTMHMMTMhelixcoord: 385..407
NoneNo IPR availableTMHMMTMhelixcoord: 422..444
NoneNo IPR availableTMHMMTMhelixcoord: 457..476
NoneNo IPR availableTMHMMTMhelixcoord: 481..500
NoneNo IPR availableTMHMMTMhelixcoord: 353..372

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000850_piloncontigtig00000850_pilon:1234457..1236442 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra3727.t1Ggra3727.t1Gracilaria gracilis GNS1m malemRNAtig00000850_pilon 1234457..1236442 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra3727.t1 ID=Ggra3727.t1|Name=Ggra3727.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=662bp
MNVRLVIITLFAALLVLPSTSAQAASKASGRRGRFADLTPNTGNVASFNN
GHLERRDEGQDVSSSGQTHFPQHAVVTGLLQPGNKVINRESLARVKVNKM
ENSTSTVKTPAVMSDVSGDPGSRHEDADTIHEFSHGSNQLPENEAKGHTE
DGLHLNGNHSHEQSLDLEERKLKSASNKLVKWLRNRLRKRLADVAHLESD
MTTERELLKTLNDEIEDASREREDEIKQKLQTKKELSDFRRHSNSPNAGM
KRVQSQTKALSEQLERVKEAYESMIARHKDLETKLKHSGFAHWLEARGSD
YFPDTAIGVLSKSAQILGPVSHGFQRALLFDDQLSTEMEQIVPGSDETIL
HKIVWDITMMVPFIPFILLLRLGNGMIHRLSVYDIVLCGSGLFAAECALC
FVMSVFFSREILGVCQEINETILITLLFTNALIYFVSLVAQILISCLRPS
RTEVVQVILLFTVGCRYYQYVFRPVMLSKPVMVTILSHVLYIITFSLIFI
EKKRAMNFKTSYDVYCYKTMAILKAWVSETGNAMRNMFSDVLPYGSRSYT
ESGYGSRSSFYASVSNGDVNSELNGEMSTEAIEPLEYKQVPRTQQGTDYF
GQNKWYPVNRSASLIRKTFTASQEYGDRMNSNSANSNKLGRGQKRSNSGS
DDSVAYQSCME*
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