Ggra5550.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra5550.t1
Unique NameGgra5550.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length331
Homology
BLAST of Ggra5550.t1 vs. uniprot
Match: A0A2V3IU79 (Peptidyl-prolyl cis-trans isomerase B n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IU79_9FLOR)

HSP 1 Score: 516 bits (1329), Expect = 1.070e-182
Identity = 265/332 (79.82%), Postives = 290/332 (87.35%), Query Frame = 0
Query:    1 MSRRRPT--DPLTPLLDEDLESATPDVANGKQRSAAERAGRFFRTRPVSSLLLVIALCAAAMLTFSAGRSVARMLSGRTADEKPPEHVSAIANFTEHEEEHAPAPDEKGTLVDGSDARDAIQVAVEDRMDQKTQNERNAVSESKCYRKFEPGKLGSARTLCVTDEFYFDISIGSTPVGRITIGVFGDVVPKSAANFRALATCTGVFADDSLCYRQDSFHRVVTNFVAQGGSKATGRSIYGPPFQEEKSKDHHSFLQHGERGVVSWAEYPIGSQFFILIRDEATYLDGNHVVFGIVTDGLDVLDKIHDAPRTREEPTERITITDCGDVHKSVS 330
            MSRRRPT  D L+P  D DLESA  D+ NGKQR+ AERAGRFFRTRPVSSLLL+I LC+ A++TF+AGRSVAR+LSG    +   E ++A  N T  + E  PAPDEKG L+DGSDARDAIQVAVE R+DQ+T +ERNAV+ESKC+RKFEPGKLGS RTLCVTDEFYFDI+IG  PVGRITIGVFGDVVPKSAANFRALATCTGVFADD+LCYRQDSFHRVVTNFVAQGGSKATGRSIYGP F+EEKS DHHSFLQH ERGVVSWAEYPIGSQFFILIRDEA YLD NHVVFGIVTDG DVL KIHDAPRT EEPTER+TITDCGDVHK++S
Sbjct:    1 MSRRRPTELDNLSP--DGDLESANCDLTNGKQRTPAERAGRFFRTRPVSSLLLIIFLCSIALITFTAGRSVARLLSGVKTKKSASEVIAA--NLTIPDTEDVPAPDEKGALIDGSDARDAIQVAVEKRLDQQTMDERNAVAESKCHRKFEPGKLGSERTLCVTDEFYFDIAIGGKPVGRITIGVFGDVVPKSAANFRALATCTGVFADDTLCYRQDSFHRVVTNFVAQGGSKATGRSIYGPTFREEKSSDHHSFLQHAERGVVSWAEYPIGSQFFILIRDEAKYLDLNHVVFGIVTDGFDVLGKIHDAPRTGEEPTERVTITDCGDVHKAMS 328          
BLAST of Ggra5550.t1 vs. uniprot
Match: A0A1X6PBS9 (PPIase cyclophilin-type domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PBS9_PORUM)

HSP 1 Score: 228 bits (581), Expect = 8.130e-67
Identity = 111/187 (59.36%), Postives = 133/187 (71.12%), Query Frame = 0
Query:  138 VSESKCYRKFEPGKLGSARTLCVTDEFYFDISIG-STPVGRITIGVFGDVVPKSAANFRALATCTGVFADDSLCYRQDSFHRVVTNFVAQGGSKATGRSIYGPPFQEEKSKDHHSFLQHGERGVVSWAEYPIGSQFFILIRDEATYLDGNHVVFGIVTDGLDVLDKIHDAPRTREEPTERITITDCG 323
            +S + C R  + G LGSA  LCVT E++ D+ +G + PV RITIG+FG  VPKSA N+ ALATC+G   DD  C+R DSFHR+V NFV QGG+  TGRS++G  F+EE S DHHS L H  RGVV+WAEYPIGSQF+IL+ D A YLD NHVVFGIV+DGL V DKI   P     PTER+TI   G
Sbjct:  276 MSSAPCKRMLQTGTLGSATPLCVTGEYFVDVKVGDAAPVDRITIGIFGQAVPKSAVNWHALATCSGG-DDDPSCFRNDSFHRIVPNFVIQGGNHGTGRSVFGSTFREEVSADHHSVLSHTARGVVAWAEYPIGSQFYILMTDAADYLDKNHVVFGIVSDGLHVADKIQKLPLDNGAPTERVTIVSTG 461          
BLAST of Ggra5550.t1 vs. uniprot
Match: A0A1W5LA96 (Cychlophilin 4 n=1 Tax=Neoporphyra seriata TaxID=79731 RepID=A0A1W5LA96_9RHOD)

HSP 1 Score: 215 bits (547), Expect = 4.170e-63
Identity = 99/187 (52.94%), Postives = 129/187 (68.98%), Query Frame = 0
Query:  138 VSESKCYRKFEPGKLGSARTLCVTDEFYFDISIG-STPVGRITIGVFGDVVPKSAANFRALATCTGVFADDSLCYRQDSFHRVVTNFVAQGGSKATGRSIYGPPFQEEKSKDHHSFLQHGERGVVSWAEYPIGSQFFILIRDEATYLDGNHVVFGIVTDGLDVLDKIHDAPRTREEPTERITITDCG 323
            +S + C R  + G LGS   +CVT E++ D+ +  + P  R+T+ +FG  VPKSA N+ ALATC G   DD+ C+R DSFHRVV NFV QGG++ TGRS++G  F+EE S + HS L H  RGV++WAEYPIGSQF+IL+ D A YLDGNHVVFGIV DGLDV +K+   P     P +R++I   G
Sbjct:   72 MSSAPCVRTLQTGSLGSTTPVCVTGEYFLDVQVTPNAPTERLTVAIFGHAVPKSAVNWHALATCVGG-EDDAACFRNDSFHRVVPNFVIQGGNRGTGRSVFGSTFREEVSAERHSVLSHSARGVLAWAEYPIGSQFYILMADAAVYLDGNHVVFGIVVDGLDVAEKVQTQPLVNGAPEQRVSIVSAG 257          
BLAST of Ggra5550.t1 vs. uniprot
Match: A0A5J4Z8K0 (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z8K0_PORPP)

HSP 1 Score: 180 bits (457), Expect = 2.230e-51
Identity = 89/175 (50.86%), Postives = 110/175 (62.86%), Query Frame = 0
Query:  157 TLCVTDEFYFDISIGSTPVGRITIGVFGDVVPKSAANFRALATCTGVFADDS----LCYRQDSFHRVVTNFVAQGGSKATGRSIYGPPFQEEKSKDHHSFLQHGERGVVSWAEYPIGSQFFILIRDE----ATYLDGNHVVFGIVTDGLDVLDKIHDAPRTREEPTERITITDCG 323
            T+CVT   Y D+    T +GR+ I +FG +VP+SA+NF  LATC    AD      LCY  DSFHR++  FVAQGGS ATGRS++G  F E K   HHSFL H  RGV++WAE+PIGSQF+I +  +      YLD NHVVFG V  G  VLD +   P  +EEP  +I I D G
Sbjct:   92 TICVTHIVYLDLEQNGTAMGRLEIALFGSIVPQSASNFAKLATCEMAKADPKKNAHLCYHGDSFHRILPGFVAQGGSHATGRSVFGGTFSEMKEPKHHSFLSHASRGVLAWAEFPIGSQFYITLSHDHNSGPAYLDANHVVFGYVMAGESVLDLLDSTPLNKEEPKSKIWIVDSG 266          
BLAST of Ggra5550.t1 vs. uniprot
Match: C1MI65 (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Micromonas pusilla (strain CCMP1545) TaxID=564608 RepID=C1MI65_MICPC)

HSP 1 Score: 130 bits (328), Expect = 3.750e-33
Identity = 80/183 (43.72%), Postives = 104/183 (56.83%), Query Frame = 0
Query:  147 FEPGKLGSARTLCVTDEFYFDISIGSTPVGRITIGVFGDVVPKSAANFRALATC---TGVFADDSLCYRQDSFHRVVTNFVAQGGSKATGRSIYGPPFQEEKSKDHHSFLQHGERGVVSWAEY---PIGSQFFILIRDEATYLDGNHVVFGIVTDGLDVLDKIHDAPRTREEPTERITITDCG 323
            F  G   S  +  VTD+ +FD+SIG  P GRIT+G++GDVVPK+A NFRALAT    TG      L Y+  +FHRV+ NF+ QGG    G    G      K  D +  LQH   G +S A       GSQFFI    + ++LDG HVVFG V +G+DV+ KI     +   P++ +TITD G
Sbjct:   18 FASGATASDASPKVTDKVFFDVSIGGIPAGRITMGLYGDVVPKTAENFRALATGEKGTGK-RGKPLHYKGSTFHRVIPNFMIQGGDFTDGNGRGGESIYGAKFADENFSLQHAGPGDLSMANSGPNTNGSQFFICTI-KTSWLDGRHVVFGKVLEGMDVVYKIEAVGSSSGTPSKEVTITDSG 198          
BLAST of Ggra5550.t1 vs. uniprot
Match: A0A016UDI4 (Peptidyl-prolyl cis-trans isomerase n=2 Tax=Ancylostoma TaxID=29169 RepID=A0A016UDI4_9BILA)

HSP 1 Score: 130 bits (327), Expect = 4.460e-33
Identity = 81/195 (41.54%), Postives = 104/195 (53.33%), Query Frame = 0
Query:  146 KFEPGKLGSARTLCVTDEFYFDISIGSTPVGRITIGVFGDVVPKSAANFRALATCTGVFADDS----LCYRQDSFHRVVTNFVAQGGSKATG-----RSIYGPPFQEEKSKDHHSFLQHGERGVVSWAEY---PIGSQFFILIRDEATYLDGNHVVFGIVTDGLDVLDKIHDAPRTREEPTERITITDCGDVHKS 328
            +F  G + SA       + + D+ IG TP G+ITI ++ DVVPK+A NFRAL  CTG          L ++  SFHR++ +F+ QGG    G      SIYG  F++E  K     L H   G VS A       GSQFFI   D   +LDG HVVFG VTDGL V+ KI         P E++TI DCG++  S
Sbjct:    9 RFLLGAVRSASNAAARSQVFLDVKIGDTPAGKITIELYNDVVPKTAENFRAL--CTGEKGKGKSGLPLHFKGSSFHRIIPDFMIQGGDFTLGDGRGGESIYGHKFEDENFK-----LNHSGFGCVSMANAGPDTNGSQFFICTADTP-WLDGKHVVFGQVTDGLSVVKKIESMGSRSGRPKEKVTIADCGEIKPS 195          
BLAST of Ggra5550.t1 vs. uniprot
Match: A0A8H3TQD3 (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Naganishia liquefaciens TaxID=104408 RepID=A0A8H3TQD3_9TREE)

HSP 1 Score: 130 bits (327), Expect = 1.010e-32
Identity = 76/181 (41.99%), Postives = 108/181 (59.67%), Query Frame = 0
Query:  154 SARTLCVTDEFYFDISIGSTPVGRITIGVFGDVVPKSAANFRALATCTGVFADDS---LCYRQDSFHRVVTNFVAQGGSKATG-----RSIYGPPFQEEKSKDHHSFLQHGERGVVSWAEYPIGSQFFILIRDEATYLDGNHVVFGIVTDGLDVLDKIHDAPRTR-EEPTERITITDCGDV 325
            +A+   +T++ YFDI  G  P+GRI +G++G  VPK+A NFRAL  CTG  AD       Y+  SFHRV+ NF+ QGG    G     +SIYG  F +E  K  H+    G+  + +  +   GSQFFI      ++LDG HVVFG V +G+DV+  I D P+ R + P+E++TI D G++
Sbjct:   32 AAKGPIITNKVYFDIEHGGKPLGRIVMGLYGKTVPKTAENFRAL--CTGKTADGEELGFGYKGSSFHRVIKNFMIQGGDFTRGDGTGGKSIYGAKFPDENFKLKHT--APGKLSMANSGKDTNGSQFFITTA-VTSWLDGRHVVFGDVLEGMDVVRAIEDVPKARGDAPSEKVTIVDAGEL 207          
BLAST of Ggra5550.t1 vs. uniprot
Match: A0A3P7IRB2 (Peptidyl-prolyl cis-trans isomerase n=2 Tax=Strongylidae TaxID=27830 RepID=A0A3P7IRB2_STRVU)

HSP 1 Score: 129 bits (324), Expect = 1.630e-32
Identity = 80/178 (44.94%), Postives = 100/178 (56.18%), Query Frame = 0
Query:  163 EFYFDISIGSTPVGRITIGVFGDVVPKSAANFRALATCTGVFADDS----LCYRQDSFHRVVTNFVAQGGSKATG-----RSIYGPPFQEEKSKDHHSFLQHGERGVVSWAEY---PIGSQFFILIRDEATYLDGNHVVFGIVTDGLDVLDKIHDAPRTREEPTERITITDCGDVHKS 328
            + +FD++IG  P G+ITI +F DVVPK+A NFRAL  CTG          L Y+  +FHRV+  F+ QGG    G      SIYG  F++E  K +HS L     G VS A       GSQFFI   D   +LDG HVVFG VTDG+ V+ KI         P E+ITI DCG++  S
Sbjct:   36 KVFFDVNIGDKPAGKITIELFNDVVPKTAENFRAL--CTGEKGTGKSGKPLHYKGSAFHRVIPEFMIQGGDFTLGDGRGGESIYGQKFEDENFKLNHSGL-----GCVSMANAGPDTNGSQFFICTADTP-WLDGKHVVFGKVTDGISVVKKIESMGSRSGRPKEKITIADCGEIKSS 205          
BLAST of Ggra5550.t1 vs. uniprot
Match: A0A7S3NJ90 (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NJ90_9STRA)

HSP 1 Score: 128 bits (322), Expect = 2.710e-32
Identity = 68/176 (38.64%), Postives = 101/176 (57.39%), Query Frame = 0
Query:  160 VTDEFYFDISIGSTPVGRITIGVFGDVVPKSAANFRALATCTGVFADD--SLCYRQDSFHRVVTNFVAQGGSKATG-----RSIYGPPFQEEKSKDHHSFLQHGERGVVSWAEYPIGSQFFILIRDEATYLDGNHVVFGIVTDGLDVLDKIHDAPRTREEPTERITITDCGDVHKS 328
            VT + YFD++IG  P GR+ +G+FG+ VPK++ NFRALATC         +LCY+   FHR++  F+ QGG    G      SIYG  F++E  K  H  +  G   + +  +   GSQFFI    + ++LDG HVVFG V +G+DV+ +I        +P + + I +CG++  S
Sbjct:   24 VTTKVYFDVTIGGAPAGRVVMGLFGETVPKTSENFRALATCEKGIGKSGKALCYKGSKFHRIIPQFMLQGGDFTRGDGTGGESIYGSKFKDENFKIKH--MAPGYLSMANAGKDTNGSQFFITTV-KTSWLDGRHVVFGKVLEGMDVVSEIEKVGSQSGKPKKEVLIAECGELDMS 196          
BLAST of Ggra5550.t1 vs. uniprot
Match: A0A2T9Z4C5 (Peptidyl-prolyl cis-trans isomerase n=2 Tax=Harpellales TaxID=61421 RepID=A0A2T9Z4C5_9FUNG)

HSP 1 Score: 127 bits (318), Expect = 1.140e-31
Identity = 72/172 (41.86%), Postives = 98/172 (56.98%), Query Frame = 0
Query:  160 VTDEFYFDISIGSTPVGRITIGVFGDVVPKSAANFRALATCTGVFADDSLCYRQDSFHRVVTNFVAQGGSKATG-----RSIYGPPFQEEKSKDHHSFLQHGERGVVSWA---EYPIGSQFFILIRDEATYLDGNHVVFGIVTDGLDVLDKIHDAPRTREEPTERITITDCG 323
            VTD  Y DI  G T +GR+ +G++G  VPK+A NF+ L T    F      Y+   FHRV+ +F+ QGG    G     +SIYG  F +E  K     L+H + G++S A   +   GSQFFI      ++LDG HVVFG V +G+D++ KI D P+TR+ P   I I DCG
Sbjct:   31 VTDRLYMDIKQGDTNLGRVVLGLYGGTVPKTAKNFKELCTHEHGFG-----YKGSKFHRVIKDFMIQGGDFTNGNGTGGKSIYGAKFDDENFK-----LKHSKPGLLSMANAGKNTNGSQFFITTV-VTSWLDGKHVVFGEVLEGMDIIRKIEDTPKTRDAPNVDIVIADCG 191          
The following BLAST results are available for this feature:
BLAST of Ggra5550.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IU791.070e-18279.82Peptidyl-prolyl cis-trans isomerase B n=1 Tax=Grac... [more]
A0A1X6PBS98.130e-6759.36PPIase cyclophilin-type domain-containing protein ... [more]
A0A1W5LA964.170e-6352.94Cychlophilin 4 n=1 Tax=Neoporphyra seriata TaxID=7... [more]
A0A5J4Z8K02.230e-5150.86Peptidyl-prolyl cis-trans isomerase n=1 Tax=Porphy... [more]
C1MI653.750e-3343.72Peptidyl-prolyl cis-trans isomerase n=1 Tax=Microm... [more]
A0A016UDI44.460e-3341.54Peptidyl-prolyl cis-trans isomerase n=2 Tax=Ancylo... [more]
A0A8H3TQD31.010e-3241.99Peptidyl-prolyl cis-trans isomerase n=1 Tax=Nagani... [more]
A0A3P7IRB21.630e-3244.94Peptidyl-prolyl cis-trans isomerase n=2 Tax=Strong... [more]
A0A7S3NJ902.710e-3238.64Peptidyl-prolyl cis-trans isomerase n=1 Tax=Aureou... [more]
A0A2T9Z4C51.140e-3141.86Peptidyl-prolyl cis-trans isomerase n=2 Tax=Harpel... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002130Cyclophilin-type peptidyl-prolyl cis-trans isomerase domainPRINTSPR00153CSAPPISMRASEcoord: 216..228
score: 61.6
coord: 182..197
score: 54.07
coord: 285..300
score: 56.98
IPR002130Cyclophilin-type peptidyl-prolyl cis-trans isomerase domainPFAMPF00160Pro_isomerasecoord: 166..323
e-value: 2.5E-31
score: 109.0
IPR002130Cyclophilin-type peptidyl-prolyl cis-trans isomerase domainPROSITEPS50072CSA_PPIASE_2coord: 165..324
score: 29.022018
IPR029000Cyclophilin-like domain superfamilyGENE3D2.40.100.10coord: 154..329
e-value: 2.7E-46
score: 159.8
IPR029000Cyclophilin-like domain superfamilySUPERFAMILY50891Cyclophilin-likecoord: 157..325
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 90..106
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..31
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 76..106
NoneNo IPR availablePANTHERPTHR11071PEPTIDYL-PROLYL CIS-TRANS ISOMERASEcoord: 161..324
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 46..66
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..45
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 67..330
NoneNo IPR availableTMHMMTMhelixcoord: 46..65

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000842_piloncontigtig00000842_pilon:908592..909584 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra5550.t1Ggra5550.t1Gracilaria gracilis GNS1m malemRNAtig00000842_pilon 908592..909584 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra5550.t1 ID=Ggra5550.t1|Name=Ggra5550.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=331bp
MSRRRPTDPLTPLLDEDLESATPDVANGKQRSAAERAGRFFRTRPVSSLL
LVIALCAAAMLTFSAGRSVARMLSGRTADEKPPEHVSAIANFTEHEEEHA
PAPDEKGTLVDGSDARDAIQVAVEDRMDQKTQNERNAVSESKCYRKFEPG
KLGSARTLCVTDEFYFDISIGSTPVGRITIGVFGDVVPKSAANFRALATC
TGVFADDSLCYRQDSFHRVVTNFVAQGGSKATGRSIYGPPFQEEKSKDHH
SFLQHGERGVVSWAEYPIGSQFFILIRDEATYLDGNHVVFGIVTDGLDVL
DKIHDAPRTREEPTERITITDCGDVHKSVS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002130Cyclophilin-type_PPIase_dom
IPR029000Cyclophilin-like_dom_sf