Ggra5565.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra5565.t1
Unique NameGgra5565.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length544
Homology
BLAST of Ggra5565.t1 vs. uniprot
Match: A0A2V3IWY4 (BZIP domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IWY4_9FLOR)

HSP 1 Score: 454 bits (1168), Expect = 1.140e-151
Identity = 253/548 (46.17%), Postives = 356/548 (64.96%), Query Frame = 0
Query:    1 MAYELPIYPTHSEAQALASLATNPSSEPLSGIQYFHELLRVLRDPSCSRFLFAGDPIELQHLVHPQLPQFAVTNEMSETSVEPNSSPQDSLSDHWSSRHFTFPAYSSDGKTFGFVVSKDIYIPGSAWGLEPTKVETLTTSRFVKHDEEGYTVLVANYAEFNAYRLEYSKMITNTRQVRFIVAVDANIFQGLLLRGSLFVKDMMAALLFMQMSTEHRKCPDCRLSADECFCEAPVVKPRHPFDYEAFRKCTLGSGGVFEGRTTVALFAAGVKIRGGALGCLFVSRPKFDFDLVEGLRRLAITKHVGGETARHSNLKLFADAARNMRQAYIRNRVTSSSEAALGGLLLSDVGTVSQTLNLATEPVAVNSLLPLVGEEEGNLESVDMNITPSLIDTLLVPSVQSGTFGGAMNISEEDVVGTQAVDVVTPDAEDAFGSHEHTSRTEE-FLAGDVESVETDSLSIRKNNEEKVNAD-----DRIRRLKVELRKERNRACAQRSNMRKKVMMDALKNDIKTTREKADLLRSQEMLLRRQNIFLKKQVADKYVAG 542
            M+ +  I+PTH+EA++LASLAT+  S+P SGIQYFH LLRVL+DP+ S FLF  +PIEL HL HP+L   AV N M E +VEPN++  +SLSD W+S+HF FP ++ DG T+GF++S DIY+PGSAWG    K+E+   +RFVK+DE+G+TV VA Y +++ +RLEYSK+ T+T+Q+RF+VAV    F+ LL  G L +  ++  L FMQM+TE+RKCP C  +  EC+C AP +KPRHPFDYEAF+   +   G+F+GRT +ALFA GVKIR G LG  ++S P FDFDLVE LRRLAI+ HVG E ARHS++  F++A         +N   S  +       L D+G     +  ++   A     PL  E E  +      ITPS++ + L P  +       +  S+E+   +   D +T D  D       ++  +   +  +  S E+ SLS+ +++  K         +++RRLK ELR+E+NRA AQRSNM+KK ++DALK+D+ T+REKADLLRS+E+LLRR+N+ LKKQ++    AG
Sbjct:    1 MSTDSSIFPTHAEARSLASLATSSRSQPFSGIQYFHGLLRVLQDPAVSNFLFTPEPIELHHLAHPRLYDQAVANNMLEINVEPNANVHNSLSDQWNSKHFMFPTHTVDGNTYGFIISDDIYMPGSAWGAANLKIESRAVTRFVKNDEDGHTVFVAYYEDWDTFRLEYSKLTTSTQQIRFLVAVQGKAFRALLKNGVLSISAIVPLLAFMQMTTEYRKCPQCLRACGECYCAAPNIKPRHPFDYEAFKLGAMSRSGIFDGRTEMALFANGVKIRSGVLGSRYISNPSFDFDLVERLRRLAISDHVGKEAARHSHI--FSNAVGVASTGRDQNPFDSIGKPVQLHTPLEDLGNEGALIQTSSANDA-EVWAPLTEEGEQGI-GASQQITPSILSSFLTPLEE-------LTPSDENTQSSVVSDPMTTDLIDTSVQLRQSNALDAAIMNSEPLSTESGSLSVDQDSGTKTAKTASPDKEQVRRLKAELRREKNRASAQRSNMKKKAVLDALKHDLATSREKADLLRSKELLLRRENLSLKKQISANRSAG 537          
BLAST of Ggra5565.t1 vs. uniprot
Match: A0A2V3IY12 (BZIP domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IY12_9FLOR)

HSP 1 Score: 235 bits (600), Expect = 1.330e-67
Identity = 169/511 (33.07%), Postives = 253/511 (49.51%), Query Frame = 0
Query:   38 LLRVLRDPSCSRFLFAGDPIELQHLVHPQLPQFAVTNEMSETSVEPNSSPQDSLSDHWSSRHFTFPAYSSDGKTFGFVVSKDIYIPGSAWGLEPTKVETLTTSRFVKHDEEGYTVLVANYAEFNAYRLEYSKMITNTRQVRFIVAVDANIFQGLLLRGSLFVKDMMAALLFMQMSTEHRKCPDCRLSADECFCEAPVVKPRHPFDYEAFRKCTLGSGGVFEGRTTVALFAAGVKIRGGALGCLFVSRPKFDFDLVEGLRRLAITKHVGGETARHSNLKLFADAARNMR--QAYIRNRVTSSSEAALGGLLLSDVGTVSQTLNLATEPVAVNSLLPLVGEEEGNLESVDMNITPSL---IDTLLVPSVQSGTFGGAMNISEEDVV------GTQAVDV-----VTPDAEDAFGSHEHTSRTEEFLAGDVESVETDSLSIRKNNEEKVNADDRIRRLKVELRKERNRACAQRSNMRKKVMMDALKNDIKTTREKADLLRSQEMLLRRQNIFLK 532
            +LR+  +P    FLFA +PI L +L +PQL Q A+    +ET V+P  SPQ+S+SD ++   F  PA++ +  TFGF V  +++ P  AW    T +  L   RFVK+ +EGY +++A Y      R+EY K ++ T Q R ++    + F+     GS  V  +   +L +Q S EHR CP C     +C C+     P HP D+ +F   TL   G + G + V ++  G  +  GALG      P  + DLV+ LR LAI++H   +    S L +  D     R  Q  I + +   S+               Q L+      A+ + LP        L + D+N    L   ID  ++P     TFG + + +  +++      G  + DV      T   +D+  S +  S+          +    S SI K         D+IR+LK ELR+E+NRA AQRSNMRKK + D+LK+ +KTT EK D+LRS+EMLLR +NI L+
Sbjct:    1 MLRIFDNPDIHNFLFADEPIHLSYLANPQLKQSAIACSFNETKVDPTPSPQNSMSDRFAGDFFLTPAFTYNHITFGFGVMNNVFYPAQAWNTPETAMNALGECRFVKNSKEGYNIVIAYYGT-ECSRIEYVKTVSTTTQARCVIGTKISSFRDATKGGSCNVDAVFPTVLLLQTSFEHRDCPFCNSDHSQCKCQLQFATPFHPLDHSSFLANTLSEFGNYMGVSHVTMYREGAAMCMGALGSRLSFAPSAEDDLVDRLRTLAISRHALIQDPAPS-LSIQQDVPEEPRSDQVNITDEIFDQSD--------------QQQLSQQNSTNAIVTDLPCP------LLATDLNFDADLEQVIDITMLP-----TFGDSSSRTSPEILQDISSNGVASFDVSPAPVATVQQQDSHSSRDQPSQPPTSCETQPSNTPPTSSSIGK-----ATVKDQIRKLKAELRREKNRAAAQRSNMRKKALNDSLKSSLKTTHEKLDILRSKEMLLREENIRLR 479          
BLAST of Ggra5565.t1 vs. uniprot
Match: R7QC15 (BZIP domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QC15_CHOCR)

HSP 1 Score: 99.8 bits (247), Expect = 1.760e-18
Identity = 145/585 (24.79%), Postives = 223/585 (38.12%), Query Frame = 0
Query:    9 PTHSEAQALASL-ATNPSSEPLSGIQYF----HELLRVLRDPSCSRFLFAGDPIELQHLVHPQLPQFAVTNEMSETSVEPNSSPQDSLSD-HWSSRHFTFPAYSSDGKTFGFVVSKDIYIPGSAWGLEPTKVET--LTTSRFVKHDEEGYTVLVANYAEFNAYRLEYSKMITNTRQVRFIVAVDANIFQGLL------LRGSLFVKDMMAALLFMQMSTEHRKCPDCRLSADE-CFCEAPVVKPRHPFDYEAFRKCTLGSGGVFEGRTTVALFAAGVKIRGGALGCLFVSRPKFDFDLVEGLRRLAITKHV--------------GGETARHSNLKLFADAARNMRQ-----AYIRN-----------RVTSSSEAALGGLLLSDVG-------------TVSQTLNLATE--PVAVNSLLPLVGEEEGNLESVDMNITPSLIDTLLVPSVQSGTFGGAMNISEEDVVGTQAVDVVTPDAEDAFGSHEHTSRTEEFLAGDVESVETDSLSIRKNNEEKVNADDRIRRLKVELRKERNRACAQRSNMRKKVMMDALKNDIKTTREKADLLRSQEMLLRRQNIFLKK 533
            P+  E   LASL A  P+S  L+   +     HE  R+   P  S FLF  +   L  L  P   + A++  +  T+VE  S P D+L D H S      PA+S    + GF V +      S WG      +   L   R+V+ D  G  ++       N +++E     + T + R     D + F+  +       R SL       AL F+  S E R CP C       C C   +  P H  D+       +   G FEG T  A+F  G++++   LGC+         DL++ L R AI+  +               G     +   +  D   N+ Q     +Y+             + TSS  +  G L+   +              T SQ    A +  P   +  L  V E  G  +  D    PS   T    S+ SG+ G ++      +  TQ V           G+   T R +         V  +++   K              L+ +LRK+RNR  AQRSNM++K   D LK  ++    +A  LR++E+    +N+ L+K
Sbjct:    8 PSEHEHAYLASLSAPAPASSALTPAVHLGSELHEFFRLCALPWVSDFLFNEEMDSLPVLTAPANMRSAISCTIQMTNVEAPS-PGDNLFDTHLSGVALFVPAFSIASISVGFGVQECHLQSFSDWGTRSGLFDEPDLMHLRYVRDDATGALIIAYKDPHTNLFKVESMVQASTTTRRRVYAIFDLDHFRAAVNAEYCSFRPSLVAN----ALKFLCSSVETRHCPKCAAPPSAACHCPLGLKLPSHSLDFSTVANNMVSFTGAFEGVTRSAVFNDGIELQAANLGCVINIDGCIGNDLIDRLSRWAISDQLTDKKGCPTALIMPPSGTDDAETTADMVIDTD-NLAQVSAALSYVAPXXXXXXVDLFAKGTSSCSSGSGMLITESLDXXXXXXVPERAPPTASQIFETAAQAPPPTAHGTLDFVDEITGQAQVSDSFFNPSEPSTPAEESMSSGSAGMSVIAPSAAIFDTQPV---------VIGA---TLRNKAIAPSAPVQVSKETMQSEKE-------------LRAQLRKQRNREAAQRSNMKRKFKNDTLKQALRDVHSRAAQLRARELXXXEENLELRK 561          
BLAST of Ggra5565.t1 vs. uniprot
Match: R7Q2J6 (Uncharacterized protein (Fragment) n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q2J6_CHOCR)

HSP 1 Score: 63.5 bits (153), Expect = 3.170e-7
Identity = 33/66 (50.00%), Postives = 48/66 (72.73%), Query Frame = 0
Query:  472 RIRRLKVELRKERNRACAQRSNMRKKVMMDALKNDIKTTREKADLLRSQEMLLRRQNIFLKKQVAD 537
            R RRLK   R+E+NR CAQRSN R K + D LK D+++ REK ++LR++EM LR+ N+ L++  A+
Sbjct:  234 RTRRLKARERREKNRLCAQRSNRRAKAVRDGLKADLRSCREKLEVLRAKEMALRQMNLELRRSFAE 299          
BLAST of Ggra5565.t1 vs. uniprot
Match: R7QKC1 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QKC1_CHOCR)

HSP 1 Score: 59.7 bits (143), Expect = 9.530e-6
Identity = 113/534 (21.16%), Postives = 221/534 (41.39%), Query Frame = 0
Query:   50 FLFAGDPIELQHLVHPQLPQFAVTNEMSETSVEPNSSP--QDSLSDH-WSSRHFTFPAYSSDGKTFGFVVSKDIYIPGSAWGLEPTKVET---------LTTSRFVKHDEEGYTVLVANYAEFNAYRLEYSKMITNTRQVRFIVAVDANIFQGLLLRG--SLFVKDMMAALLFMQMSTEHRKCPDCRLS-ADECFCEAPVVK-PRHPFDYEAFRKCTLGSGGVFEGRTTVALFAAGVKIRGGALGCLFVSRPKFDFDLVEGLRRLAITKHVGGETARHSNLKLFADAARNMRQAYIRNRVTSSSEAALGGLLLSDVGTVSQTLNLATEP-------VAVNSLLPLVGEEEGNLESVDMNITPSLIDTLLVPSVQSGTFG------------GAMNISEEDVVGTQAVD------VVTPDAEDAFGSHEHTSRTEEFLAGDVESVETDSLSIRKNNEEKVNAD-DRIRRLKVEL----RKERNRACAQRSNMRKKVMMDALKNDIKTTREKADLLRSQEMLLRRQNIFLKKQVAD 537
            FLF  +PI L +L  P L Q A+T ++S  S      P   DS+    + +R+   P ++++  T G  V            L+P+K +              RFV+  +   T+ V +  E ++  ++Y  M +++      ++   + F  +   G   + ++ + A+ +    ++  R C +C    A  C C +  ++ PRHPFD E F+       G + G  +     +  ++     G   + +   D   +  + R  +   +G +T R S    F       ++  IR+ V +     + G   +    VS   N +  P           S LP+    +  ++   +   P L+     P    G+ G            G ++ S  ++  T+A         +  + E +F +     R  + L   +E   + S S+   +E    ++  + R +  EL    R+ +NRA A RSNM+KK  ++ +K  ++ ++++ ++LR +EM LR +N+ L+K+V +
Sbjct:   50 FLFTKEPINLVYLESPGLAQSALTLDLSIASTAEVEQPLSADSVDKTLFCARYLMIPCFAAESLTLGVGV------------LDPSKRDRAGQASPAAQFRNMRFVRDSKRRRTLAVMDSPEDDSIFMQYFSMDSSSCPYTLSISFRRSKFFSVAEEGLHQVNIRSLEASYIKYSHTSHLRPCINCGAPPASGCTCYSDGMQNPRHPFDTENFKLSFAHDFGEYHGLMSNVAKRSNQEVSHSFCGVRSLFQEAVDTAHMNRMSRWGMRTRLGNDTPRASVQPRF-------QRLDIRSDVQAVLYPDMDGHNFAHGQRVSGNENSSNRPDDDCDTVAQPTSHLPIPPSRDTGIDLHGLEAIP-LLSLSQSPCADDGSAGKEFLPTATSVIHGNLHESPREMR-TEAQPQNRLKHTIQQNGELSFQAINSPER--QGLQEGMEMCLSSSGSLSPKDEHSPTSNFSQSRSIAKELQAARRRLQNRASAHRSNMKKKAFINDMKEKLRESKDRIEVLRDKEMKLRLENLRLRKEVEN 560          
The following BLAST results are available for this feature:
BLAST of Ggra5565.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A2V3IWY41.140e-15146.17BZIP domain-containing protein n=1 Tax=Gracilariop... [more]
A0A2V3IY121.330e-6733.07BZIP domain-containing protein n=1 Tax=Gracilariop... [more]
R7QC151.760e-1824.79BZIP domain-containing protein n=1 Tax=Chondrus cr... [more]
R7Q2J63.170e-750.00Uncharacterized protein (Fragment) n=1 Tax=Chondru... [more]
R7QKC19.530e-621.16Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 459..497
NoneNo IPR availableCOILSCoilCoilcoord: 500..520
NoneNo IPR availableCDDcd14686bZIPcoord: 479..528
e-value: 1.10335E-8
score: 49.4661
NoneNo IPR availableSUPERFAMILY57959Leucine zipper domaincoord: 477..535

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000842_piloncontigtig00000842_pilon:962373..964004 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra5565.t1Ggra5565.t1Gracilaria gracilis GNS1m malemRNAtig00000842_pilon 962373..964004 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra5565.t1 ID=Ggra5565.t1|Name=Ggra5565.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=544bp
MAYELPIYPTHSEAQALASLATNPSSEPLSGIQYFHELLRVLRDPSCSRF
LFAGDPIELQHLVHPQLPQFAVTNEMSETSVEPNSSPQDSLSDHWSSRHF
TFPAYSSDGKTFGFVVSKDIYIPGSAWGLEPTKVETLTTSRFVKHDEEGY
TVLVANYAEFNAYRLEYSKMITNTRQVRFIVAVDANIFQGLLLRGSLFVK
DMMAALLFMQMSTEHRKCPDCRLSADECFCEAPVVKPRHPFDYEAFRKCT
LGSGGVFEGRTTVALFAAGVKIRGGALGCLFVSRPKFDFDLVEGLRRLAI
TKHVGGETARHSNLKLFADAARNMRQAYIRNRVTSSSEAALGGLLLSDVG
TVSQTLNLATEPVAVNSLLPLVGEEEGNLESVDMNITPSLIDTLLVPSVQ
SGTFGGAMNISEEDVVGTQAVDVVTPDAEDAFGSHEHTSRTEEFLAGDVE
SVETDSLSIRKNNEEKVNADDRIRRLKVELRKERNRACAQRSNMRKKVMM
DALKNDIKTTREKADLLRSQEMLLRRQNIFLKKQVADKYVAGR*
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