Ggra5618.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra5618.t1
Unique NameGgra5618.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length252
Homology
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BLAST of Ggra5618.t1 vs. uniprot
Match: A0A2V3J0V0 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J0V0_9FLOR)

HSP 1 Score: 150 bits (379), Expect = 6.200e-41
Identity = 99/254 (38.98%), Postives = 143/254 (56.30%), Query Frame = 0 
Query:    3 MFSRLPVLRLKRKHDGNNVDALHVRVNPKRRRTGGETQQFDPSDCPQQAHYVN-VFFRRVQQLDEAEQLLERTDTRVIDVPSHVIQQGEEQLP--TQVLCNGTPMQRVEVASSLHQNKESERVCCHPAVQPNDSTHLYDIFTLETDGTVY---DQNSQIALACINADDISLFDDQDDDQSLPYTSDEDAKTVDYPSTPQHSLDDSLSHASSLGDTDVYNSHGSHCDVSCACGMGFRDVPSFAYDPYYDDSCDDY 250
            MF++ PVLRLKRK   + VD + VR+ PKRRRT         +D  Q A  V+ + FRRV    +A ++L+R DTR+ID+    + Q +  L   +Q LCN  PM R E+ S  +  ++  ++  H  ++    T  YD+F L+++       DQ+    L  I+A  I LF+  D D S  +TSD+DA+++DYPSTPQHS D S S  SS   +     HGSHC + C CG+G RD   +AYD +  +  +DY
Sbjct:   20 MFAKTPVLRLKRKRSEHVVDTVQVRLPPKRRRTA-------QTDASQHAEAVDHLVFRRVHLQQQAHRILQRQDTRIIDLDCAPLSQPQHALQPQSQPLCNDQPMVRFELPSPSYPLEQ--QLSQHDRMR---QTQTYDVFILDSEQNARPQTDQHQDETLMYIDAQQIDLFE-SDGDTSSTHTSDQDARSIDYPSTPQHS-DQSPSQTSSYASSPALGEHGSHCTLHCPCGLGMRDATFYAYDIHQHEYHNDY 259
The following BLAST results are available for this feature:
BLAST of Ggra5618.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3J0V06.200e-4138.98Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 171..204
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 186..204

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000842_piloncontigtig00000842_pilon:1171222..1171977 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra5618.t1Ggra5618.t1Gracilaria gracilis GNS1m malemRNAtig00000842_pilon 1171222..1171977 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra5618.t1 ID=Ggra5618.t1|Name=Ggra5618.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=252bp
MDMFSRLPVLRLKRKHDGNNVDALHVRVNPKRRRTGGETQQFDPSDCPQQ
AHYVNVFFRRVQQLDEAEQLLERTDTRVIDVPSHVIQQGEEQLPTQVLCN
GTPMQRVEVASSLHQNKESERVCCHPAVQPNDSTHLYDIFTLETDGTVYD
QNSQIALACINADDISLFDDQDDDQSLPYTSDEDAKTVDYPSTPQHSLDD
SLSHASSLGDTDVYNSHGSHCDVSCACGMGFRDVPSFAYDPYYDDSCDDY
Q*
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