Ggra5681.t2 (polypeptide) Gracilaria gracilis GNS1m male
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Overview
Homology
BLAST of Ggra5681.t2 vs. uniprot
Match: A0A2V3IX62 (Transcription elongation factor SPT4 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IX62_9FLOR) HSP 1 Score: 208 bits (530), Expect = 1.010e-67 Identity = 102/123 (82.93%), Postives = 111/123 (90.24%), Query Frame = 0
Query: 1 MAQASGAHVVPTEVTQSRLKACMSCSLIKTTQQFYTDGCDNCPFMSLNGDKERISACTTSQFVGTYVVMNPTKSWVAKWQRV-----GAYAIHIDARMPDDIVEQLEENRIRMHSVLATTDKP 118
M+ G+HVVPTEV QS+LKACMSCSLIKTTQQFYTDGCDNC FMSL GDKERISACTTSQFVGTYVVMNPTKSWVAKWQRV GAYA+HIDAR+PDDIVEQLEEN IR++SV+ATT+KP
Sbjct: 1 MSNNDGSHVVPTEVAQSKLKACMSCSLIKTTQQFYTDGCDNCDFMSLAGDKERISACTTSQFVGTYVVMNPTKSWVAKWQRVASFVPGAYAVHIDARLPDDIVEQLEENGIRVYSVVATTEKP 123
BLAST of Ggra5681.t2 vs. uniprot
Match: A0A7S1TIX5 (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TIX5_9RHOD) HSP 1 Score: 120 bits (302), Expect = 4.520e-33 Identity = 53/110 (48.18%), Postives = 76/110 (69.09%), Query Frame = 0
Query: 11 PTEVTQSRLKACMSCSLIKTTQQFYTDGCDNCPFMSLNGDKERISACTTSQFVGTYVVMNPTKSWVAKWQRV-----GAYAIHIDARMPDDIVEQLEENRIRMHSVLATT 115
PTE + ++L+ACM+CSL+K+ QF GC+NCPF+ L D+ERI CTT F G + VM P +SWVAKWQR+ G YA+ ++ +P+DI+E++ EN + H V AT+
Sbjct: 9 PTETSLNKLRACMNCSLVKSAHQFSIRGCENCPFLGLENDRERIQLCTTPNFSGLFSVMRPLESWVAKWQRIVKLRSGCYALSVEGELPEDIIEEMLENGGKAHRVRATS 118
BLAST of Ggra5681.t2 vs. uniprot
Match: A0A7S0BQA9 (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BQA9_9RHOD) HSP 1 Score: 120 bits (300), Expect = 1.690e-32 Identity = 57/113 (50.44%), Postives = 78/113 (69.03%), Query Frame = 0
Query: 9 VVPTEVTQSRLKACMSCSLIKTTQQFYTDGCDNCPFMSLNGDKERISACTTSQFVGTYVVMNPTKSWVAKWQRV-----GAYAIHIDARMPDDIVEQLEENRIRMHSVLATTD 116
+VPT+ + S+L+ C+SCSL+KT QF T+GC+NCPF+++ GDKERI CT++ +G Y MNP SWVA+WQR G YAI IDA +P+ I E+L E IR+ AT +
Sbjct: 24 MVPTDWS-SKLRGCLSCSLVKTVNQFATNGCENCPFLNMQGDKERIMDCTSNSILGIYTTMNPRTSWVARWQRTVKLRPGCYAIAIDATLPEGIEEELSEQGIRVKRTRATAE 135
BLAST of Ggra5681.t2 vs. uniprot
Match: A0A1X6P9H5 (Spt4 domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P9H5_PORUM) HSP 1 Score: 119 bits (298), Expect = 4.400e-32 Identity = 55/113 (48.67%), Postives = 74/113 (65.49%), Query Frame = 0
Query: 8 HVVPTEVTQSRLKACMSCSLIKTTQQFYTDGCDNCPFMSLNGDKERISACTTSQFVGTYVVMNPTKSWVAKWQRVG------AYAIHIDARMPDDIVEQLEENRIRMHSVLAT 114
V+PTE S+L+AC+SCSLIKT +QF DGCDNC F+ + ++R+ CT+ FVG V NP SWV +WQR+G YAI +DA++P+DI E LE+N R+ AT
Sbjct: 32 RVIPTEFLPSKLRACLSCSLIKTAEQFLLDGCDNCDFLDMANSRDRVGQCTSGAFVGVAGVANPADSWVGRWQRLGRNAVAGCYAIGVDAKLPEDIRESLEDNGYRVARTRAT 144
BLAST of Ggra5681.t2 vs. uniprot
Match: A0A7S0ZLH4 (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZLH4_9RHOD) HSP 1 Score: 115 bits (288), Expect = 6.610e-31 Identity = 54/111 (48.65%), Postives = 74/111 (66.67%), Query Frame = 0
Query: 9 VVPTEVTQSRLKACMSCSLIKTTQQFYTDGCDNCPFMSLNGDKERISACTTSQFVGTYVVMNPTKSWVAKWQRV-----GAYAIHIDARMPDDIVEQLEENRIRMHSVLAT 114
+VP E ++L+AC+SCSL+KT +QFY GCDNCP + L D E I+ CT++ F GTYV++ P SWV+KWQR G YAI ID ++P E+L EN R++ + AT
Sbjct: 8 IVPQEFGMNKLRACLSCSLVKTQKQFYDQGCDNCPGLMLQRDSEAIAVCTSNAFSGTYVLLRPKDSWVSKWQRTRRFRPGCYAIQIDIQLPQSEEERLVENGQRVNRIRAT 118
BLAST of Ggra5681.t2 vs. uniprot
Match: M1V579 (Spt4 domain-containing protein n=1 Tax=Cyanidioschyzon merolae (strain 10D) TaxID=280699 RepID=M1V579_CYAM1) HSP 1 Score: 103 bits (256), Expect = 4.220e-26 Identity = 52/109 (47.71%), Postives = 71/109 (65.14%), Query Frame = 0
Query: 9 VVPTEVTQSRLKACMSCSLIKTTQQFYTDGCDNCP--FMSLNGDKERISACTTSQFVGTYVVMNPTKSWVAKWQRV-----GAYAIHIDARMPDDIVEQLEENRIRMHS 110
VVP+EV S+L+AC+SC L+K+ QF GC+NCP F + GD+ER+ TT++F G + P SWVAKWQR+ G YAI I A +PDD++E+LE R + S
Sbjct: 10 VVPSEVQSSKLRACLSCGLVKSVAQFLAYGCENCPGLFEAGTGDRERVLTFTTAEFSGLVALYRPKVSWVAKWQRLSRKVPGCYAIGILAELPDDVLEELEALRFDVES 118
BLAST of Ggra5681.t2 vs. uniprot
Match: A0A7J7IN23 (Transcription elongation factor SPT4 n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IN23_9RHOD) HSP 1 Score: 98.6 bits (244), Expect = 2.780e-24 Identity = 45/101 (44.55%), Postives = 69/101 (68.32%), Query Frame = 0
Query: 9 VVPTEVTQSRLKACMSCSLIKTTQQFYTDGCDNCPFM--SLNGDKERISACTTSQFVGTYVVMNPTKSWVAKWQRV-----GAYAIHIDARMPDDIVEQLE 102
VVP+E+ S+L+AC+SC L+K+ QF GC+NCP + + GD+ER+ TT++F G + P +SWVA+WQR+ G YA+ I A +PDD++E+L+
Sbjct: 10 VVPSEIQSSKLRACLSCGLVKSVAQFLAYGCENCPGLIEAGTGDRERVLTFTTTEFSGITALYKPKRSWVARWQRLSQLVPGCYAVGIHANVPDDVLEELD 110
BLAST of Ggra5681.t2 vs. uniprot
Match: A0A2P6VHW0 (Transcription elongation factor SPT4 homolog n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6VHW0_9CHLO) HSP 1 Score: 97.4 bits (241), Expect = 8.840e-24 Identity = 44/102 (43.14%), Postives = 66/102 (64.71%), Query Frame = 0
Query: 11 PTEVTQSRLKACMSCSLIKTTQQFYTDGCDNCPFMSLNGDKERISACTTSQFVGTYVVMNPTKSWVAKWQRV-----GAYAIHIDARMPDDIVEQLEENRIR 107
PT++ +S L+ C+ C L+KT +QFY GC+NCPF+ + GD+ER+ CTTS+F G V++PT SW AKW + G YA+ + A +P I + L+ I+
Sbjct: 16 PTDLGKS-LRCCVPCRLVKTFEQFYEQGCENCPFLEMEGDRERVFDCTTSEFKGMVSVVDPTSSWCAKWLHLRKAVPGCYALSVSAELPQHIEDILDNRGIK 116
BLAST of Ggra5681.t2 vs. uniprot
Match: A0A6B2LT88 (Spt4 domain-containing protein n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2LT88_9EUKA) HSP 1 Score: 96.7 bits (239), Expect = 1.140e-23 Identity = 41/95 (43.16%), Postives = 63/95 (66.32%), Query Frame = 0
Query: 18 RLKACMSCSLIKTTQQFYTDGCDNCPFMSLNGDKERISACTTSQFVGTYVVMNPTKSWVAKWQRV------GAYAIHIDARMPDDIVEQLEENRI 106
RL+ACM C L+K T+QF GC+NC F+ ++GD +R+ +CTT+ F G +M P +SWVA+WQR+ G YA+ + R+ D++ L EN++
Sbjct: 3 RLRACMGCGLVKETRQFQKFGCNNCTFLKIHGDGDRLESCTTTNFSGLISMMKPERSWVARWQRMRPNLVPGCYAVTVQGRLGPDMINILHENQV 97
BLAST of Ggra5681.t2 vs. uniprot
Match: A0A2G8LK21 (Transcription elongation factor SPT4 n=1 Tax=Stichopus japonicus TaxID=307972 RepID=A0A2G8LK21_STIJA) HSP 1 Score: 96.7 bits (239), Expect = 1.460e-23 Identity = 48/108 (44.44%), Postives = 67/108 (62.04%), Query Frame = 0
Query: 9 VVPTEVTQSRLKACMSCSLIKTTQQFYTDGCDNCP-FMSLNGDKERISACTTSQFVGTYVVMNPTKSWVAKWQRV-----GAYAIHIDARMPDDIVEQLEENRIRMHS 110
+VPTE+ +R AC+ CSLIKTT QF DGCDNC ++ + G+++ + CT+S F G +M P SWVAKWQR G YAI + +P IV++L+ I+ S
Sbjct: 3 IVPTELRHTR--ACLLCSLIKTTDQFEADGCDNCEEYLQMKGNRDMVMDCTSSSFDGMIALMTPEDSWVAKWQRTSRCTKGCYAISVTGHLPKGIVQELKSRGIQYRS 108 The following BLAST results are available for this feature:
BLAST of Ggra5681.t2 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Ggra5681.t2 ID=Ggra5681.t2|Name=Ggra5681.t2|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=121bpback to top |