Ggra5595.t1 (polypeptide) Gracilaria gracilis GNS1m male
|
Overview
Homology
BLAST of Ggra5595.t1 vs. uniprot
Match: A0A2V3IFY4 (F-box domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IFY4_9FLOR) HSP 1 Score: 291 bits (746), Expect = 1.270e-97 Identity = 128/211 (60.66%), Postives = 160/211 (75.83%), Query Frame = 0
Query: 1 MDLMDIDTERHCTIDSLPDGVMRQIFKYLTPEELEISRQVCTRWNENAAHHHLWRQHCFKHSPSLRTERKAWPILACCEPVSPVPWRYVFRTLQNRPRWVAPLYKSGRFLCNTIVHLIKGSYVEIPGLLLVKRRFDIVHLPLFLGATCTYFYMEPLHERDKAPYEDFVQYLTNRKRAGLIFVPKKRLMLIPPCEYVRQSVNYSGERLIGAL 211
MD M++DT+ T++ +PD ++R IF +L P++LE +RQVC RWNE A+HH LWR+HCF HSPSLRTER AWP+LACC+PV+P+ WRYV+RTLQNRPR L K+ RFLCN I HLIKG Y ++P L+V+RRFDI++LP FL CTYFY+EPL E DK Y+DFV YL R RAGL+ R MLIPPC V Q VNY+G+RLI A+
Sbjct: 1 MDAMEVDTDNVVTMNDIPDRLVRHIFSFLEPQQLEAARQVCQRWNECASHHLLWRKHCFTHSPSLRTERSAWPLLACCKPVAPIQWRYVYRTLQNRPRCTVTLQKAERFLCNMIAHLIKGPYAQLPSTLVVQRRFDIMYLPFFLNHNCTYFYLEPLTEADKGAYDDFVNYLIQRDRAGLVMTKMNRFMLIPPCRDVGQRVNYTGDRLIAAV 211
BLAST of Ggra5595.t1 vs. uniprot
Match: A0A2V3IDC9 (F-box domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IDC9_9FLOR) HSP 1 Score: 164 bits (414), Expect = 3.690e-45 Identity = 74/200 (37.00%), Postives = 117/200 (58.50%), Query Frame = 0
Query: 16 SLPDGVMRQIFKYLTPEELEISRQVCTRWNENAAHHHLWRQHCFKHSPSLRTERKAWPILACCEPVSPVP-WRYVFRTLQNRPRWVAPLYKSGRFLCNTIVHLIKGSYVE---IPGLLLVKRRFDIVHLPLFLGATCTYFYMEPLHERDKAPYEDFVQYLTNRKRAGLIFVPKKRLMLIPPCEYVRQSVNYSGERLIGAL 211
S+PD + IF +L +L +R+VCTRWN + LWR+ C + +L ++ W ++ C P+ WR ++ ++N P+W L K+GRF+CN + H I G+ V +P +L+V+RRF+IVHL F+ Y EP E D+ +++F++YL R RAGL ++R + IPPC+Y R +NY G L+G +
Sbjct: 197 SIPDETAKHIFSFLGGRDLARAREVCTRWNRFGSEEGLWRKLCLANWSALESDPAVWSLIDRCIPLGSYNCWRSIYPKIENIPKWTCRLQKTGRFVCNLVAHQISGTPVGDVGLPKVLVVERRFNIVHLQTFVLHDAAVLYFEPESEADRHGFDEFIEYLNKRTRAGLALEDQRRFIFIPPCDYTRTQINYHGRSLLGVV 396
BLAST of Ggra5595.t1 vs. uniprot
Match: A0A7S0G2G1 (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0G2G1_9RHOD) HSP 1 Score: 160 bits (404), Expect = 4.120e-45 Identity = 74/203 (36.45%), Postives = 115/203 (56.65%), Query Frame = 0
Query: 13 TIDSLPDGVMRQIFKYLTPEELEISRQVCTRWNENAAHHHLWRQHCFKHSPSLRTERKAWPIL-ACCEPVSPVPWRYVFRTLQNRPRWVAPLYKSGRFLCNTIVHLIKGSYVEIPGL---LLVKRRFDIVHLPLFLGATCTYFYMEPLHERDKAPYEDFVQYLTNRKRAGLIFVPKKRLMLIPPCEYVRQSVNYSGERLIGAL 211
+I+ LP+ +++ IF +L +L R VC +WNE + WR+ C + PSL T++ W ++ E P WR ++ + NRPRW L K+G+F+CN H I+G + GL L+V+RRF ++HL F+ T Y EP+ D+ +E F+ YL R RAGL +R + +PPC+Y ++ VNY G L+G +
Sbjct: 58 SIEGLPNELVKMIFSFLDGPDLANVRLVCKQWNEFSCEDRFWRELCIRLWPSLDTDKSTWRLIDEAVEATDPSKWRKIYPKVANRPRWKCRLQKTGKFICNLNAHQIRGPGLGDQGLPYTLVVERRFSLLHLNQFVLPEATMLYFEPVTPEDRPGFEQFIDYLVRRSRAGLALEGDRRFIFVPPCQYSQEKVNYDGHSLLGVV 260
BLAST of Ggra5595.t1 vs. uniprot
Match: A0A7S2ZYW3 (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZYW3_9RHOD) HSP 1 Score: 158 bits (400), Expect = 3.140e-43 Identity = 74/203 (36.45%), Postives = 114/203 (56.16%), Query Frame = 0
Query: 13 TIDSLPDGVMRQIFKYLTPEELEISRQVCTRWNENAAHHHLWRQHCFKHSPSLRTERKAWPIL-ACCEPVSPVPWRYVFRTLQNRPRWVAPLYKSGRFLCNTIVHLIKGSYVEIPGL---LLVKRRFDIVHLPLFLGATCTYFYMEPLHERDKAPYEDFVQYLTNRKRAGLIFVPKKRLMLIPPCEYVRQSVNYSGERLIGAL 211
+I+ LP+ +++ IF +L +L R VC +WNE + WR+ C + PSL T++ W ++ E P WR ++ + NRPRW L K+G+F+CN H I+G + GL L+V+RRF ++HL F+ T Y EP+ D+ +E F+ YL R RAGL +R + +PPC Y ++ VNY G L+G +
Sbjct: 180 SIEGLPNELVKLIFSFLDGPDLANVRLVCKQWNEFSCEDRFWRELCIRLWPSLDTDKSTWRLIDEAVEATDPSKWRKIYPKVANRPRWKCRLQKTGKFICNLNAHQIRGPGLGDQGLPYTLVVERRFSLLHLNQFVLPEATMLYFEPVTPEDRPGFEQFIDYLVKRSRAGLALEGDRRFIFVPPCHYSQEKVNYDGHSLLGVV 382
BLAST of Ggra5595.t1 vs. uniprot
Match: A0A2V3IDD9 (F-box domain-containing protein n=2 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IDD9_9FLOR) HSP 1 Score: 155 bits (392), Expect = 2.840e-42 Identity = 76/207 (36.71%), Postives = 116/207 (56.04%), Query Frame = 0
Query: 9 ERHCTIDSLPDGVMRQIFKYLTPEELEISRQVCTRWNENAAHHHLWRQHCFKHSPSLRTERKAWPILACCEPVS-PVPWRYVFRTLQNRPRWVAPLYKSGRFLCNTIVHLIKGSYVE---IPGLLLVKRRFDIVHLPLFLGATCTYFYMEPLHERDKAPYEDFVQYLTNRKRAGLIFVPKKRLMLIPPCEYVRQSVNYSGERLIGAL 211
ER LPD + + IF +L L I R+VC++WN A+ W+ + SL T+ AW ++ V+ P WR ++ P+W L K+GRF+CN + H I+G+ + +P +L+V+RRF++ HL F+ + + Y EP E+D+ YEDF++YL R RAGL ++R + IPPCEY R V Y G L+G +
Sbjct: 155 ERQQLFGLLPDEITKHIFSFLDGPNLAICREVCSKWNAFASCEKQWKTLVTRKWRSLETDVDAWKLIDSSVDVNAPNRWRMIYPKASAIPKWRCRLQKTGRFMCNLVAHQIRGAPIGDAGLPDVLVVERRFNLQHLQAFVMSEASVLYFEPESEQDRGGYEDFIEYLIKRTRAGLALDDQQRFIFIPPCEYTRTHVKYEGRSLLGVV 361
BLAST of Ggra5595.t1 vs. uniprot
Match: A0A2V3IY22 (F-box domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IY22_9FLOR) HSP 1 Score: 149 bits (375), Expect = 1.960e-41 Identity = 70/199 (35.18%), Postives = 114/199 (57.29%), Query Frame = 0
Query: 15 DSLPDGVMRQIFKYLTPEELEISRQVCTRWNENAAHHHLWRQHCFKHSPSLRTERKAWPILACCEPVSPVP-WRYVFRTLQNRPRWVAPLYKSGRFLCNTIVHLIKGSYVE---IPGLLLVKRRFDIVHLPLFLGATCTYFYMEPLHERDKAPYEDFVQYLTNRKRAGLIFVPKKRLMLIPPCEYVRQSVNYSGERLIG 209
D L D ++R +F++L EL +R+VC+RWN A HLW++ C +L T+++ W ++ + WR ++ ++N P+W L K+ F+CN + H + G+ V +P +L+V+RRF IVHL F Y EP E D+ +++F++YL+ R RAGL ++R +L PPC+Y R + Y G L+G
Sbjct: 4 DHLYDKLVRHVFQFLGARELARAREVCSRWNALAGGEHLWKKLCVADWAALETDQELWQLIDRAISLDDANCWRNMYPKIENIPKWTCCLQKTRSFVCNLVAHQVSGTPVGDVGLPKVLVVERRFSIVHLQTFALHDAAVLYFEPESEADRHGFDEFIEYLSQRARAGLALEAERRFVLFPPCDYGRIQLGYHGRSLLG 202
BLAST of Ggra5595.t1 vs. uniprot
Match: S0F3M8 (F-box domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=S0F3M8_CHOCR) HSP 1 Score: 152 bits (384), Expect = 4.850e-40 Identity = 71/198 (35.86%), Postives = 113/198 (57.07%), Query Frame = 0
Query: 17 LPDGVMRQIFKYLTPEELEISRQVCTRWNENAAHHHLWRQHCFKHSPSLRTERKAWPIL-ACCEPVSPVPWRYVFRTLQNRPRWVAPLYKSGRFLCNTIVHLIKGSYV--EIPGLLLVKRRFDIVHLPLFLGATCTYFYMEPLHERDKAPYEDFVQYLTNRKRAGLIFVPKKRLMLIPPCEYVRQSVNYSGERLIGAL 211
+PD + + IF +L + L +R+VC RWN+ A LW+ C K +L +++ W ++ +P P WR +F + N +W L K+GRF+CN + H I G+ + +P +L+V+RRF+I+HL F+ + Y EP D+ ++DF+ YL R RAGL + R + IPPC+Y R V Y G+ L+G +
Sbjct: 293 IPDELAKHIFGFLEGKHLARAREVCHRWNDFACEEPLWKSLCLKKWKALESDKDLWKLVDKDVDPEGPNCWRKIFPKVSNTSQWRCRLQKTGRFICNLVAHQISGTPLLGGLPEVLVVERRFNILHLQTFVRPDASILYFEPELASDRTGFDDFIDYLNKRTRAGLALEGQLRFIFIPPCDYTRTQVEYPGQSLLGVV 490
BLAST of Ggra5595.t1 vs. uniprot
Match: A0A5J4YZ77 (Flowering time control protein FPA n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YZ77_PORPP) HSP 1 Score: 152 bits (384), Expect = 5.840e-39 Identity = 73/201 (36.32%), Postives = 112/201 (55.72%), Query Frame = 0
Query: 15 DSLPDGVMRQIFKYLTPEELEISRQVCTRWNENAAHHHLWRQHCFKHSPSLRTERKAWPIL-ACCEPVSPVPWRYVFRTLQNRPRWVAPLYKSGRFLCNTIVHLIKGSYVE---IPGLLLVKRRFDIVHLPLFLGATCTYFYMEPLHERDKAPYEDFVQYLTNRKRAGLIFVPKKRLMLIPPCEYVRQSVNYSGERLIGAL 211
++LP + + I +L + +RQVC W E A +W+Q C K SL + AWP+ P WR ++ +L W L K+GRF+C+ I H + GS + +P L+V+RRF+I+HL F+ Y EP E D++ +EDF++YLT R RAGL ++R + IPPCEY + ++NY G+ L+G +
Sbjct: 634 NALPHELTKHILSFLDGRNMARARQVCQTWREIACDEEIWKQLCIKEWRSLAADPDAWPLANPLVSHEDPNRWRKIYPSLVTGKSWRCRLQKTGRFICHMIAHQVNGSSLGERGLPDTLVVERRFNILHLQTFVLPDAAVLYFEPESEADRSGFEDFIEYLTRRTRAGLALDEQRRFIFIPPCEYSKDTLNYRGKSLLGVV 834
BLAST of Ggra5595.t1 vs. uniprot
Match: A0A7S0ZH25 (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZH25_9RHOD) HSP 1 Score: 146 bits (369), Expect = 2.090e-38 Identity = 80/225 (35.56%), Postives = 115/225 (51.11%), Query Frame = 0
Query: 6 IDTERHCTIDS--LPDGVMRQIFKYLTPEELEISRQVCTRWNENAAHHHLWRQHCFKHSPSLRTERKAWPIL--------------ACCEPVSPVPWRYVFRTLQNRPRWVAPLYKSGRFLCNTIVHLIKGSYVE---IPGLLLVKRRFDIVHLPLFLGATCTYFYMEPLHERDKAPYEDFVQYLTNRKRAGLIFVPKKRLMLIPPCEYVRQSVNYSGERLIGAL 211
+ + H DS LP V+ IF L L RQV W E A+ H LW+ C KH +L+ + WPI+ E + W ++ ++ P W L K+GRF+CN I H I G + +P L+V+RRF+I+HL F+ + Y EP E D+ +E+F+QYLTNR RAGL ++R + IPPCEY + + YSG L+G +
Sbjct: 190 LSSHSHNAYDSNALPHEVLDLIFSKLDGNSLATCRQVSKSWKEFASCHKLWKSLCLKHWRALQYDSNLWPIIYRSDTNSSNENSINLLKESYNHERWIRIYPLIKGFPSWKIRLQKTGRFICNLIAHQISGRSLTSYGLPETLVVERRFNILHLENFILPEASVLYYEPESESDRNGFEEFIQYLTNRTRAGLALDDQRRFIFIPPCEYSKTHLGYSGNALLGVI 414
BLAST of Ggra5595.t1 vs. uniprot
Match: M1VHB8 (F-box domain-containing protein n=2 Tax=cellular organisms TaxID=131567 RepID=M1VHB8_CYAM1) HSP 1 Score: 146 bits (368), Expect = 3.370e-38 Identity = 74/218 (33.94%), Postives = 122/218 (55.96%), Query Frame = 0
Query: 10 RHCTIDSLPDGVMRQIFKYLTPEELEISRQVCTRWNENAAHHHLWRQHCFKHSPSLRTERKAWPIL-----------ACCEPV--SPVPWRYVFRTLQNRPRWVAPLYKSGRFLCNTIVHLIKGSYVE---IPGLLLVKRRFDIVHLPLFLGATCTYFYMEPLHERDKAPYEDFVQYLTNRKRAGLIFVPKKRLMLIPPCEYVRQSVNYSGERLIGAL 211
R TI LPD +R+IF Y+ +L R VC +W + A+ +LWR+ C ++ +L T+ W +L + EP+ WR+++ ++ P+W L K+GRF+C + H I G + IP +++V+RRF++ HL F+ FY EP E D+ Y++F++YL R RAGL ++R++ IPPC Y + ++Y+GE L+G +
Sbjct: 205 RPTTISDLPDDTLRRIFTYMNGPQLGRVRGVCKKWCKFASDENLWRKLCLENWRALETDAYLWRLLLDYHLSQEAQASNREPLVSEDSRWRFMYPIVRYVPKWTCRLQKTGRFVCRLVAHQIGGPLTDEESIPPVVVVERRFNLNHLNEFVLPDAAVFYFEPEREEDRDGYQNFIEYLIQRHRAGLALDEERRIIFIPPCAYSQNVLHYNGEALLGVV 422 The following BLAST results are available for this feature:
BLAST of Ggra5595.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 19
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Ggra5595.t1 ID=Ggra5595.t1|Name=Ggra5595.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=217bpback to top |