Ggra641.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra641.t1
Unique NameGgra641.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length102
Homology
BLAST of Ggra641.t1 vs. uniprot
Match: A0A2V3J0L3 (Probable ATP-dependent transporter ycf16 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J0L3_9FLOR)

HSP 1 Score: 120 bits (301), Expect = 1.420e-29
Identity = 67/99 (67.68%), Postives = 78/99 (78.79%), Query Frame = 0
Query:    3 ARGSKLSGGQRQLVAISLSIVTAENSGTGVLDEATSTLDAVSERVVQVAWDRVGPGGVTIAVAHRLSPVKDADAIAVVWRRKILEVGRHEKLLRIENWE 101
            ARG++LSGGQRQ VAI+ ++V        +LDEATS LDAVSERVVQ A DR G G  T+A+AHRLS VKDADAIAVV R KI+E+GRHE+LLRIEN E
Sbjct: 1191 ARGTRLSGGQRQRVAIARALVREPK--ILLLDEATSALDAVSERVVQQALDRAGKGRTTVAIAHRLSTVKDADAIAVVARGKIVEMGRHEQLLRIENGE 1287          
BLAST of Ggra641.t1 vs. uniprot
Match: A0A2V3IVK0 (Probable ATP-dependent transporter ycf16 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IVK0_9FLOR)

HSP 1 Score: 103 bits (256), Expect = 1.690e-23
Identity = 57/97 (58.76%), Postives = 69/97 (71.13%), Query Frame = 0
Query:    3 ARGSKLSGGQRQLVAISLSIVTAENSGTGVLDEATSTLDAVSERVVQVAWDRVGPGGVTIAVAHRLSPVKDADAIAVVWRRKILEVGRHEKLLRIEN 99
            +RGSKLSGGQRQ VAI+ S+V +      +LDEATS LDAVSER VQ A D    G  TIA+AHRLS +KDAD I VV   KI+E G+H++LLR+  
Sbjct: 1189 SRGSKLSGGQRQRVAIARSLVRSPR--VLLLDEATSALDAVSERTVQKALDAAASGRTTIAIAHRLSTIKDADVIGVVKHGKIVEQGKHDELLRLNG 1283          
BLAST of Ggra641.t1 vs. uniprot
Match: R7QRK4 (Probable ATP-dependent transporter ycf16 n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QRK4_CHOCR)

HSP 1 Score: 102 bits (255), Expect = 2.300e-23
Identity = 58/99 (58.59%), Postives = 72/99 (72.73%), Query Frame = 0
Query:    3 ARGSKLSGGQRQLVAISLSIVTAENSGTGVLDEATSTLDAVSERVVQVAWDRVGPGGVTIAVAHRLSPVKDADAIAVVWRRKILEVGRHEKLLRIENWE 101
            ARG +LSGGQRQ VAI+ ++V        +LDEATS LDAVSERVVQ A D+      T+A+AHRLS VK+AD IAVV + +I+E G+HE+LLRI N E
Sbjct: 1061 ARGERLSGGQRQRVAIARALVREPR--ILLLDEATSALDAVSERVVQDALDKAAAERTTVAIAHRLSTVKNADVIAVVSKGRIVESGKHEQLLRIPNGE 1157          
BLAST of Ggra641.t1 vs. uniprot
Match: R7QKD7 (Probable ATP-dependent transporter ycf16 n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QKD7_CHOCR)

HSP 1 Score: 101 bits (251), Expect = 8.010e-23
Identity = 58/92 (63.04%), Postives = 67/92 (72.83%), Query Frame = 0
Query:    4 RGSKLSGGQRQLVAISLSIVTAENSGTGVLDEATSTLDAVSERVVQVAWDRVGPGGVTIAVAHRLSPVKDADAIAVVWRRKILEVGRHEKLL 95
            RGSKLSGGQRQ VAI+ S+V        +LDEATS LDAVSER VQ A +  G G  TIA+AHRLS ++DAD IAVV R KI+E G HE+LL
Sbjct: 1242 RGSKLSGGQRQRVAIARSLVREPK--ILLLDEATSALDAVSERAVQQALEEAGKGRTTIAIAHRLSTIQDADVIAVVKRGKIVERGTHEELL 1331          
BLAST of Ggra641.t1 vs. uniprot
Match: R7QCJ3 (Probable ATP-dependent transporter ycf16 n=4 Tax=Chondrus crispus TaxID=2769 RepID=R7QCJ3_CHOCR)

HSP 1 Score: 98.6 bits (244), Expect = 5.080e-22
Identity = 56/99 (56.57%), Postives = 71/99 (71.72%), Query Frame = 0
Query:    3 ARGSKLSGGQRQLVAISLSIVTAENSGTGVLDEATSTLDAVSERVVQVAWDRVGPGGVTIAVAHRLSPVKDADAIAVVWRRKILEVGRHEKLLRIENWE 101
            ARG +LSGGQRQ VAI+ ++V        +LDEATS LDAVSERVVQ A D+      T+A+AHRLS VK+AD IA+V + +I+E  +HE+LLRI N E
Sbjct:  373 ARGERLSGGQRQRVAIARALVREPR--ILLLDEATSALDAVSERVVQDALDKAAAERTTVAIAHRLSTVKNADVIAMVSKGRIVESEKHEQLLRIPNGE 469          
BLAST of Ggra641.t1 vs. uniprot
Match: A0A0D2MSK5 (Multidrug/pheromone exporter, MDR family, ABC transporter family n=1 Tax=Monoraphidium neglectum TaxID=145388 RepID=A0A0D2MSK5_9CHLO)

HSP 1 Score: 94.0 bits (232), Expect = 6.970e-22
Identity = 50/96 (52.08%), Postives = 69/96 (71.88%), Query Frame = 0
Query:    4 RGSKLSGGQRQLVAISLSIVTAENSGTGVLDEATSTLDAVSERVVQVAWDRVGPGGVTIAVAHRLSPVKDADAIAVVWRRKILEVGRHEKLLRIEN 99
            RG +LSGGQ+Q VAI+ ++V  ++    +LDEATS LD+ SER VQ A DR+  G  T+ VAHRLS +++AD IAVV+R  ILE G H++L+ + N
Sbjct:   70 RGVQLSGGQKQRVAIARAVV--KDPRVMLLDEATSALDSASERAVQDALDRISVGRTTVVVAHRLSTIRNADVIAVVFRGVILEQGTHDELMALPN 163          
BLAST of Ggra641.t1 vs. uniprot
Match: A0A453FYH2 (ABC transporter domain-containing protein n=1 Tax=Aegilops tauschii subsp. strangulata TaxID=200361 RepID=A0A453FYH2_AEGTS)

HSP 1 Score: 94.4 bits (233), Expect = 9.700e-22
Identity = 54/96 (56.25%), Postives = 70/96 (72.92%), Query Frame = 0
Query:    4 RGSKLSGGQRQLVAISLSIVTAENSGTGVLDEATSTLDAVSERVVQVAWDRVGPGGVTIAVAHRLSPVKDADAIAVVWRRKILEVGRHEKLLRIEN 99
            RG +LSGGQ+Q VAI+ ++V  ++    +LDEATS LDA SERVVQ A DRV  G  T+ VAHRLS V+ AD I+VV    I+E GRHE+L+RI++
Sbjct:  122 RGIQLSGGQKQRVAIARAVV--KDPKVLLLDEATSALDAESERVVQEALDRVMVGRTTVVVAHRLSTVRGADIISVVKNGMIVEKGRHEELMRIKD 215          
BLAST of Ggra641.t1 vs. uniprot
Match: A0A6G1EL42 (ABC transporter domain-containing protein n=1 Tax=Oryza meyeriana var. granulata TaxID=110450 RepID=A0A6G1EL42_9ORYZ)

HSP 1 Score: 90.5 bits (223), Expect = 1.780e-21
Identity = 52/96 (54.17%), Postives = 68/96 (70.83%), Query Frame = 0
Query:    4 RGSKLSGGQRQLVAISLSIVTAENSGTGVLDEATSTLDAVSERVVQVAWDRVGPGGVTIAVAHRLSPVKDADAIAVVWRRKILEVGRHEKLLRIEN 99
            +G +LSGGQ+Q VAI+ +I+  ++    +LDEATS LDA SER+VQ A DRV     TI VAHRLS +K AD IAV+   KI E G+HE L+RI++
Sbjct:    5 KGVQLSGGQKQRVAIARAII--KDPKILLLDEATSALDAESERIVQDALDRVVVSRTTIVVAHRLSTIKGADMIAVLKEGKIAEKGKHEALMRIKD 98          
BLAST of Ggra641.t1 vs. uniprot
Match: U7E1W6 (ABC transporter domain-containing protein (Fragment) n=1 Tax=Populus trichocarpa TaxID=3694 RepID=U7E1W6_POPTR)

HSP 1 Score: 90.5 bits (223), Expect = 2.900e-21
Identity = 52/96 (54.17%), Postives = 68/96 (70.83%), Query Frame = 0
Query:    4 RGSKLSGGQRQLVAISLSIVTAENSGTGVLDEATSTLDAVSERVVQVAWDRVGPGGVTIAVAHRLSPVKDADAIAVVWRRKILEVGRHEKLLRIEN 99
            RG++LSGGQ+Q VAI+ ++V +      +LDEATS LDA SERVVQ A DRV     T+ VAHRLS +K+AD IAVV    I+E G+HE L+ I++
Sbjct:   21 RGTQLSGGQKQRVAIARAMVKSPK--ILLLDEATSALDAESERVVQDALDRVMVSRTTVVVAHRLSTIKNADVIAVVKNGVIVEKGKHETLIHIKD 114          
BLAST of Ggra641.t1 vs. uniprot
Match: A0A6P6A818 (ABC transporter B family member 3-like n=1 Tax=Durio zibethinus TaxID=66656 RepID=A0A6P6A818_DURZI)

HSP 1 Score: 89.7 bits (221), Expect = 4.950e-21
Identity = 54/96 (56.25%), Postives = 64/96 (66.67%), Query Frame = 0
Query:    4 RGSKLSGGQRQLVAISLSIVTAENSGTGVLDEATSTLDAVSERVVQVAWDRVGPGGVTIAVAHRLSPVKDADAIAVVWRRKILEVGRHEKLLRIEN 99
            RG  LSGGQ+Q VAI+ +I  A      +LDEATS LDA SER VQ A DRV  G  T+ V+HRLS +K AD IAVV    ILE GRHE L++I+ 
Sbjct:   14 RGIHLSGGQKQRVAIARAIARAPK--ILLLDEATSALDAESERAVQDALDRVMVGRTTMVVSHRLSSIKGADLIAVVRNGVILEKGRHETLIKIKG 107          
The following BLAST results are available for this feature:
BLAST of Ggra641.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J0L31.420e-2967.68Probable ATP-dependent transporter ycf16 n=1 Tax=G... [more]
A0A2V3IVK01.690e-2358.76Probable ATP-dependent transporter ycf16 n=1 Tax=G... [more]
R7QRK42.300e-2358.59Probable ATP-dependent transporter ycf16 n=1 Tax=C... [more]
R7QKD78.010e-2363.04Probable ATP-dependent transporter ycf16 n=1 Tax=C... [more]
R7QCJ35.080e-2256.57Probable ATP-dependent transporter ycf16 n=4 Tax=C... [more]
A0A0D2MSK56.970e-2252.08Multidrug/pheromone exporter, MDR family, ABC tran... [more]
A0A453FYH29.700e-2256.25ABC transporter domain-containing protein n=1 Tax=... [more]
A0A6G1EL421.780e-2154.17ABC transporter domain-containing protein n=1 Tax=... [more]
U7E1W62.900e-2154.17ABC transporter domain-containing protein (Fragmen... [more]
A0A6P6A8184.950e-2156.25ABC transporter B family member 3-like n=1 Tax=Dur... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 4..97
e-value: 5.5E-26
score: 92.6
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 3..98
NoneNo IPR availablePANTHERPTHR43394:SF5SUBFAMILY NOT NAMEDcoord: 4..97
NoneNo IPR availablePANTHERPTHR43394ATP-DEPENDENT PERMEASE MDL1, MITOCHONDRIALcoord: 4..97

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000243_piloncontigtig00000243_pilon:54018..54323 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra641.t1Ggra641.t1Gracilaria gracilis GNS1m malemRNAtig00000243_pilon 54018..54323 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra641.t1 ID=Ggra641.t1|Name=Ggra641.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=102bp
MRARGSKLSGGQRQLVAISLSIVTAENSGTGVLDEATSTLDAVSERVVQV
AWDRVGPGGVTIAVAHRLSPVKDADAIAVVWRRKILEVGRHEKLLRIENW
E*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase