Ggra505.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra505.t1
Unique NameGgra505.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length174
Homology
BLAST of Ggra505.t1 vs. uniprot
Match: A0A2V3J6M3 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J6M3_9FLOR)

HSP 1 Score: 209 bits (532), Expect = 4.540e-64
Identity = 96/147 (65.31%), Postives = 117/147 (79.59%), Query Frame = 0
Query:    1 MGDLGQVVPLPFELRDVQSLRHAVRRAHVVINLLGKNYPTPNYSFADLHVERLHKIVQIAREERVPHFVHVSTAPPQQPCHSEWLSTKKQGEALVRDAYPSATIVRPADMFGAEDRLLTRMASNLVRMPLISLAEHGDSRVQPVWVN 147
            MGDLGQ+VPLPFELRD QS+R +VR + VVINL+GK+Y T NY FAD+HV     + +IAREE V HFVHVSTA P   C SEWL TKK+GE ++RD +P ATIVRP DMFG+EDRLLTRMA+N++R+P + LA  G+S +QPVWVN
Sbjct:   69 MGDLGQIVPLPFELRDEQSIRESVRGSSVVINLIGKHYETLNYKFADVHVHSTKALAEIAREEGVSHFVHVSTAAPLADCSSEWLRTKKEGETVIRDVFPDATIVRPTDMFGSEDRLLTRMANNIMRLPFVPLANDGESTIQPVWVN 215          
BLAST of Ggra505.t1 vs. uniprot
Match: R7Q3E2 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q3E2_CHOCR)

HSP 1 Score: 185 bits (470), Expect = 4.910e-54
Identity = 87/147 (59.18%), Postives = 109/147 (74.15%), Query Frame = 0
Query:    1 MGDLGQVVPLPFELRDVQSLRHAVRRAHVVINLLGKNYPTPNYSFADLHVERLHKIVQIAREERVPHFVHVSTAPPQQPCHSEWLSTKKQGEALVRDAYPSATIVRPADMFGAEDRLLTRMASNLVRMPLISLAEHGDSRVQPVWVN 147
            MGDLGQVVP+PFELRD  S+R A+R + V++NL+GK+Y T NY F D+HV    ++ +IAREE + HFVHVS A P +   S WL+TK +GE  VRD +P ATIVRP DMFG EDR LTRMA N+++M  I LA+ G+S  QPVWVN
Sbjct:  136 MGDLGQVVPVPFELRDEDSVRDAIRGSTVLVNLIGKHYETLNYKFPDVHVSATRRLAEIAREEGIEHFVHVSAAAPAKDTSSRWLATKIEGEDCVRDVFPDATIVRPTDMFGTEDRFLTRMAINVMQMYAIPLADDGESLAQPVWVN 282          
BLAST of Ggra505.t1 vs. uniprot
Match: A0A7S1XCI1 (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1XCI1_9RHOD)

HSP 1 Score: 163 bits (412), Expect = 8.240e-46
Identity = 79/147 (53.74%), Postives = 98/147 (66.67%), Query Frame = 0
Query:    1 MGDLGQVVPLPFELRDVQSLRHAVRRAHVVINLLGKNYPTPNYSFADLHVERLHKIVQIAREERVPHFVHVSTAPPQQPCHSEWLSTKKQGEALVRDAYPSATIVRPADMFGAEDRLLTRMASNLVRMPLISLAEHGDSRVQPVWVN 147
            MGDLGQVVP+  +LRD  SL   +R A+ VINL+GK YPT  YS  D+HVE    + ++ARE  +  F+HVS A P     SEW+ TK  GE  VR   PSATI+RP DMFG EDR LTRMA  +V  P++ L + GD +VQPV+VN
Sbjct:   94 MGDLGQVVPMEMDLRDRDSLHRMLRGANTVINLIGKPYPTRYYSLHDVHVEGAETLAEVAREHGITTFIHVSCANPDPKARSEWVRTKAAGEEAVRRIIPSATIIRPCDMFGMEDRFLTRMARCIVNQPVVLLVDDGDHKVQPVYVN 240          
BLAST of Ggra505.t1 vs. uniprot
Match: M2W2Y5 (NADH dehydrogenase (Ubiquinone) 1 alpha subcomplex 9 n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2W2Y5_GALSU)

HSP 1 Score: 150 bits (380), Expect = 5.550e-41
Identity = 78/156 (50.00%), Postives = 97/156 (62.18%), Query Frame = 0
Query:    1 MGDLGQVVPLPFELRDVQSLRHAVRRAHVVINLLGKNYPTPNYSFADLHVERLHKIVQIAREERVPHFVHVSTAPPQQPCHSEWLSTKKQGEALVRDAYPSATIVRPADMFGAEDRLLTRMASNLVRMPLISLAEHGDSRVQPVWVN----VARRA 152
            MGDLGQ++P   ELR  +SLR ++  ++VVINLLGKNYPT  YS  D+HV     I QIA+E  V HF+HVS+    +   SE+L TK  GE  VRD +PSATI+RP D+FG ED  + R    +   P I L   G  +VQPVW N    V RRA
Sbjct:  106 MGDLGQIIPFEIELRHHESLRKSMENSNVVINLLGKNYPTRYYSLYDVHVTASRTIAQIAKEVGVEHFIHVSSIGADKNSKSEFLRTKALGEEAVRDIFPSATIIRPCDIFGDEDNFINRACIIVKTFPFIPLVNEGRCKVQPVWCNDIAMVIRRA 261          
BLAST of Ggra505.t1 vs. uniprot
Match: M1VIT4 (NADH dehydrogenase I alpha subcomplex 9, mitochondrial n=1 Tax=Cyanidioschyzon merolae (strain 10D) TaxID=280699 RepID=M1VIT4_CYAM1)

HSP 1 Score: 144 bits (364), Expect = 1.460e-38
Identity = 73/159 (45.91%), Postives = 102/159 (64.15%), Query Frame = 0
Query:    1 MGDLGQVVPLPFELRDVQSLRHAVRRAHVVINLLGKNYPTPNYSFADLHVERLHKIVQIAREERVPHFVHVSTAPPQQPCHSE-----WLSTKKQGEALVRDAYPSATIVRPADMFGAEDRLLTRMASNLVRMPLISLAEHGDSRVQPVWVNVARRADV 154
            MGDLGQ+ P+  E RD+ SLR ++  ++VVINL+GK Y T  YS  D+++     I ++A  E+V HF+HVS  P     +SE     W  +K +GE LVR A+P ATI RPAD++G EDR L R+A++L R+  + + + G SR QPVWV+   RA V
Sbjct:  100 MGDLGQINPIQIEARDINSLRRSIAGSNVVINLIGKWYDTRYYSLEDVNIGVAETIARLASLEQVEHFIHVSALPAYSKANSEYPEDRWSRSKIEGERLVRQAFPRATIFRPADIWGMEDRFLARIATSLSRLGFVPVVQGGKSRTQPVWVDDVARAIV 258          
BLAST of Ggra505.t1 vs. uniprot
Match: A0A1X6P1D9 (NmrA domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P1D9_PORUM)

HSP 1 Score: 142 bits (357), Expect = 6.080e-38
Identity = 76/149 (51.01%), Postives = 93/149 (62.42%), Query Frame = 0
Query:    1 MGDLGQVVPLPFELRDVQSLRHAVRRAHVVINLLGKNYPTPNYSFADLHVERLHKIVQIAREERVPHFVHVST-APPQQPC--HSEWLSTKKQGEALVRDAYPSATIVRPADMFGAEDRLLTRMASNLVRMPLISLAEHGDSRVQPVWV 146
            MGDLGQ+VP+PFELRD  S+  AV  + VVINL+GK YPT  Y+    HV+    + + A E    HFVHVST APP       SEW  TK  GEA VR+ +P+ATIVR  +MFGAEDR LTRM     +   + +A  G + VQPV V
Sbjct:   60 MGDLGQIVPMPFELRDAASVGRAVAPSSVVINLIGKAYPTRYYTLEQAHVDAPRTLARAAAEAGAAHFVHVSTVAPPPSAVVGRSEWFRTKAAGEAAVREEFPTATIVRVTEMFGAEDRFLTRMGEWTAKYRAVFMAGDGTAPVQPVHV 208          
BLAST of Ggra505.t1 vs. uniprot
Match: C1ED84 (NAD(P)-bd_dom domain-containing protein n=2 Tax=Micromonas TaxID=38832 RepID=C1ED84_MICCC)

HSP 1 Score: 136 bits (343), Expect = 1.700e-35
Identity = 69/162 (42.59%), Postives = 101/162 (62.35%), Query Frame = 0
Query:    1 MGDLGQVVPLPFELRDVQSLRHAVRRAHVVINLLGKNYPTPNYSFADLHVERLHKIVQIAREERVPHFVHVSTAPPQQPCHSEWLSTKKQGEALVRDAYPSATIVRPADMFGAEDRLLTRMASNLVRMPLISLAEHGDSRVQPVWVNVARRADVVWDESEET 162
            MGDLGQ+V L F +RD  ++++AV R++VV+N++G+ + T N+SF D+HVE   K+ +I +E  V   VHVS         S++  TK  G+  VR A+P+ATIV+PA + G EDRLL   A +  + PL  L + G+S+ QPV+V+    A     E EET
Sbjct:  102 MGDLGQIVHLDFSIRDADAIKYAVERSNVVVNMVGREWETRNFSFEDVHVEFPAKLAEICKEVGVERLVHVSALGASHTNPSKYYQTKAAGDDAVRAAFPNATIVKPAKLIGTEDRLLNVFAEHTCKFPLAPLVDDGESKHQPVYVDDVALAIQAIVEDEET 263          
BLAST of Ggra505.t1 vs. uniprot
Match: A0A7J7IJ28 (39kDa subunit of ndufa9, NADH:ubiquinone oxidoreductase n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IJ28_9RHOD)

HSP 1 Score: 135 bits (339), Expect = 5.800e-35
Identity = 71/159 (44.65%), Postives = 98/159 (61.64%), Query Frame = 0
Query:    1 MGDLGQVVPLPFELRDVQSLRHAVRRAHVVINLLGKNYPTPNYSFADLHVERLHKIVQIAREERVPHFVHVSTAPPQQPCHS-----EWLSTKKQGEALVRDAYPSATIVRPADMFGAEDRLLTRMASNLVRMPLISLAEHGDSRVQPVWVNVARRADV 154
            MGDLGQV P+  E RD+ SLR A+  ++VVINL+GK Y T  YS  D+++     I ++A  E+V HF+HVS        +S      W  +K +GE LVR A+P ATI RPAD++G EDR L ++A +L  + L+ L   G  ++QPVWV+   RA V
Sbjct:   91 MGDLGQVNPIQIEARDISSLRRAIAGSNVVINLIGKWYDTRYYSLEDVNIGVAETIARLANLEQVEHFIHVSALTAHSNTNSIYPVDRWSRSKIEGERLVRQAFPRATIFRPADIWGMEDRFLNKIAISLSHLGLMPLVNGGRGQLQPVWVDDVARAIV 249          
BLAST of Ggra505.t1 vs. uniprot
Match: A0A454XLM2 (RmlD_sub_bind domain-containing protein n=2 Tax=Ostreococcus tauri TaxID=70448 RepID=A0A454XLM2_OSTTA)

HSP 1 Score: 130 bits (327), Expect = 2.150e-33
Identity = 62/147 (42.18%), Postives = 95/147 (64.63%), Query Frame = 0
Query:    1 MGDLGQVVPLPFELRDVQSLRHAVRRAHVVINLLGKNYPTPNYSFADLHVERLHKIVQIAREERVPHFVHVSTAPPQQPCHSEWLSTKKQGEALVRDAYPSATIVRPADMFGAEDRLLTRMASNLVRMPLISLAEHGDSRVQPVWVN 147
            MGDLGQ++ + + + D  ++RHAV R++VVIN++G+ + T N+SF D+HV    K+ +I  +  V   +HVS         S +  TK QGEA VR+A+PSAT+VRPA M G EDR L   A +  + P++ + + GD++ QPV+V+
Sbjct:   74 MGDLGQILQMDYAISDEGAIRHAVERSNVVINMVGREWETRNFSFEDVHVTFPKKLAEICADVGVRRLIHVSALGAADDHPSAYFRTKAQGEAAVREAFPSATVVRPAKMVGVEDRFLNVFAEHSRKYPMVPIIDGGDTQHQPVFVD 220          
BLAST of Ggra505.t1 vs. uniprot
Match: NADH dehydrogenase n=1 Tax=Fomitiporia mediterranea (strain MF3/22) TaxID=694068 RepID=UPI0004408E89 (NADH dehydrogenase n=1 Tax=Fomitiporia mediterranea (strain MF3/22) TaxID=694068 RepID=UPI0004408E89)

HSP 1 Score: 130 bits (326), Expect = 3.370e-33
Identity = 67/148 (45.27%), Postives = 97/148 (65.54%), Query Frame = 0
Query:    1 MGDLGQVVPLPFELRDVQSLRHAVRRAHVVINLLGKNYPTPNYSFADLHVERLHKIVQIAREERVPHFVHVS--TAPPQQPCHSEWLSTKKQGEALVRDAYPSATIVRPADMFGAEDRLLTRMASNLVRMPLISLAEHGDSRVQPVWV 146
            MGDLGQ++PL +++R+ Q +   +R +  V NL+G+NY T N++F D+HV     I +IA E  V +F+HVS   A P  P  S++ +TK +GE  V++A+P AT+VRPA MFG EDRLLT MA    R P+      GD++++PV V
Sbjct:   91 MGDLGQIIPLEWDMRNEQQIAECLRHSDTVYNLVGRNYETKNFNFHDVHVNGAASIARIAAENGVDNFIHVSHLNAAPNSP--SKFYATKYEGELRVQEAFPGATVVRPATMFGYEDRLLTNMA----RWPIWWGLNQGDTKIRPVHV 232          
The following BLAST results are available for this feature:
BLAST of Ggra505.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J6M34.540e-6465.31NADH dehydrogenase [ubiquinone] 1 alpha subcomplex... [more]
R7Q3E24.910e-5459.18NADH dehydrogenase [ubiquinone] 1 alpha subcomplex... [more]
A0A7S1XCI18.240e-4653.74Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
M2W2Y55.550e-4150.00NADH dehydrogenase (Ubiquinone) 1 alpha subcomplex... [more]
M1VIT41.460e-3845.91NADH dehydrogenase I alpha subcomplex 9, mitochond... [more]
A0A1X6P1D96.080e-3851.01NmrA domain-containing protein n=1 Tax=Porphyra um... [more]
C1ED841.700e-3542.59NAD(P)-bd_dom domain-containing protein n=2 Tax=Mi... [more]
A0A7J7IJ285.800e-3544.6539kDa subunit of ndufa9, NADH:ubiquinone oxidoredu... [more]
A0A454XLM22.150e-3342.18RmlD_sub_bind domain-containing protein n=2 Tax=Os... [more]
NADH dehydrogenase n=1 Tax=Fomitiporia mediterranea (strain MF3/22) TaxID=694068 RepID=UPI0004408E893.370e-3345.27NADH dehydrogenase n=1 Tax=Fomitiporia mediterrane... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.720coord: 3..168
e-value: 1.4E-17
score: 66.0
NoneNo IPR availablePANTHERPTHR12126:SF11NADH DEHYDROGENASE [UBIQUINONE] 1 ALPHA SUBCOMPLEX SUBUNIT 9, MITOCHONDRIALcoord: 1..147
NoneNo IPR availablePANTHERPTHR12126NADH-UBIQUINONE OXIDOREDUCTASE 39 KDA SUBUNIT-RELATEDcoord: 1..147
IPR036291NAD(P)-binding domain superfamilySUPERFAMILY51735NAD(P)-binding Rossmann-fold domainscoord: 5..154

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000238_piloncontigtig00000238_pilon:46947..47468 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra505.t1Ggra505.t1Gracilaria gracilis GNS1m malemRNAtig00000238_pilon 46947..47468 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra505.t1 ID=Ggra505.t1|Name=Ggra505.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=174bp
MGDLGQVVPLPFELRDVQSLRHAVRRAHVVINLLGKNYPTPNYSFADLHV
ERLHKIVQIAREERVPHFVHVSTAPPQQPCHSEWLSTKKQGEALVRDAYP
SATIVRPADMFGAEDRLLTRMASNLVRMPLISLAEHGDSRVQPVWVNVAR
RADVVWDESEETPISQVTSRIST*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036291NAD(P)-bd_dom_sf