|
|
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following stop_codon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| Ggra11015.t1.stop1 | Ggra11015.t1.stop1 | Gracilaria gracilis GNS1m male | stop_codon | tig00000224_pilon 79495..79497 - |
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following intron feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| Ggra11015.t1.intron1 | Ggra11015.t1.intron1 | Gracilaria gracilis GNS1m male | intron | tig00000224_pilon 81294..82260 - |
The following start_codon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| Ggra11015.t1.start1 | Ggra11015.t1.start1 | Gracilaria gracilis GNS1m male | start_codon | tig00000224_pilon 82844..82846 - |
Sequences
The following sequences are available for this feature:
mRNA sequence >Ggra11015.t1 ID=Ggra11015.t1|Name=Ggra11015.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=795bp MKLCVALSFSLALALASGARGEQQQRYAAEIVAAYLDDAPATAAAPALSA FASSSTASASAQSLSAGAAGKPSPAASGDGGGGGRTQLSLQPSAQTRAKV RSALRVARDRACAPALCFALDAGSRLTALEFRQQRDFTKLVSAIVALDER AAFAALQYTARVRRVSALTANATAFLQRVDGASRRCACAGAARGALEIRL FISLQSTMDTGIQVPVWNVLKYVVLTLLLAPLAETAMSQVTAWRHAYLVK RGKPIQLKASQWGNIALHQEVETNHVSGRFWQVFSILLALAIALPFEYSS GAKSQIVWSQQESRSSAVGTNGTDEIILLALDNPAGEPECVNPNTLASIG EFVFLKPREDKPPLLDGVVTLEDINNLLSVKYQGQSWQRRSLTSRRGETG LVLYTGGRSGQQAIIGDLERGGLLVADFESGSLCKGLLDDTFSCYDLTDK FTVSQLVHSLAAVRGSSMFLRTRFENAAKLFRFREAVVTISIGNPTVEEN LYDQRLNETGFEWLVRHRDEGGSPSLSISTLPLDKRLQSVSCQSVGSSRI RPLHLRVGEEFEGFKFEVNVSAKGDLNLVKTGTKLQTILLTEVGNEWKCA VDWISGVCESATNGSLYFMSKAERTFEFTTEFELKVTQNVESNADLAVLL AQIGTEIRRNGFIAFWDLQNLLSFSPTEVEGARIISTRMDTSVLTSSGIR VTGTIEAWALGLYAGFWLLFISILVVFRLRSWPGIDIERIYRWVVWQRET VFNASVTPRTAPTVRIESTLEDGAVQMRASYFVKDENPMELQQA* back to topspliced messenger RNA >Ggra11015.t1 ID=Ggra11015.t1|Name=Ggra11015.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=2385bp|location=Sequence derived from alignment at tig00000224_pilon:79495..82846- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.
ATGAAGCTGTGCGTCGCGCTCTCGTTCTCGCTCGCGCTCGCGCTCGCCTC GGGCGCGCGCGGCGAGCAACAGCAGCGCTACGCCGCGGAGATCGTCGCGG CGTATCTCGACGACGCGCCGGCGACCGCTGCCGCGCCCGCGCTGTCGGCG TTCGCGTCGTCATCGACGGCGTCCGCCAGCGCGCAGTCGCTCTCCGCCGG CGCCGCCGGCAAGCCATCGCCCGCGGCTTCCGGCGACGGCGGCGGCGGTG GCCGCACGCAGCTGTCGCTGCAACCGAGCGCGCAGACACGCGCAAAGGTG CGCTCCGCGCTGCGCGTCGCGCGCGACCGTGCGTGCGCGCCCGCGCTGTG CTTCGCGCTGGACGCCGGCTCGCGACTGACGGCGCTAGAGTTTCGACAGC AGCGGGACTTCACCAAGCTGGTGTCGGCCATCGTTGCGCTGGACGAGCGC GCGGCGTTCGCGGCGCTGCAGTACACGGCGCGCGTGCGGCGTGTGTCGGC GCTGACGGCCAACGCCACGGCGTTCCTGCAACGCGTGGACGGCGCCAGCA GGCGCTGCGCGTGCGCGGGTGCCGCGCGGGGCGCGTTGGAAATTCGCCTG TTCATTTCGCTGCAATCCACAATGGATACCGGAATTCAAGTGCCGGTCTG GAACGTTCTCAAATATGTCGTGCTTACACTGCTCCTTGCTCCGTTAGCGG AGACAGCAATGAGCCAAGTCACGGCCTGGAGACACGCCTACCTCGTCAAG AGGGGCAAACCTATACAACTCAAGGCTTCCCAATGGGGTAACATTGCACT TCATCAAGAAGTCGAAACCAATCATGTTTCGGGCAGATTCTGGCAGGTTT TTTCCATATTGCTCGCATTGGCAATTGCACTACCGTTCGAATATAGCAGT GGCGCCAAATCGCAAATCGTTTGGTCCCAACAGGAATCGCGTTCATCAGC AGTTGGGACAAATGGCACCGATGAAATCATTTTGCTAGCTCTGGACAACC CTGCAGGTGAACCTGAATGTGTCAATCCCAACACATTAGCTAGCATTGGT GAATTTGTCTTCTTGAAGCCCAGAGAAGATAAACCCCCACTACTGGATGG GGTTGTCACACTCGAAGATATCAACAATCTATTATCAGTCAAATACCAAG GACAAAGTTGGCAACGGAGGTCCCTGACATCCAGAAGAGGAGAAACGGGC CTTGTTCTGTATACGGGTGGCCGCAGTGGACAACAAGCCATAATTGGAGA TCTCGAAAGAGGAGGGTTATTGGTAGCCGATTTTGAAAGCGGATCGTTAT GCAAGGGGTTGCTGGATGATACGTTCTCGTGCTACGACCTGACGGACAAG TTCACAGTGTCCCAATTAGTACACTCTCTGGCGGCTGTACGTGGAAGTTC TATGTTTCTTAGGACGCGCTTCGAAAACGCAGCCAAGCTGTTTAGGTTCA GGGAAGCAGTGGTCACCATCAGTATTGGGAACCCGACTGTGGAGGAGAAT CTGTATGACCAAAGGTTGAATGAAACCGGTTTTGAGTGGCTAGTGCGTCA TAGAGACGAAGGTGGGAGTCCTAGTTTGTCGATTTCGACGCTGCCTTTGG ATAAGCGCCTGCAATCAGTGAGCTGCCAATCTGTCGGGTCGTCCCGAATT CGCCCGCTCCATCTCAGGGTCGGTGAAGAATTCGAAGGCTTTAAGTTTGA GGTAAACGTATCGGCTAAGGGCGACCTCAATCTGGTTAAGACAGGGACAA AACTGCAGACTATCCTTCTAACGGAAGTGGGAAACGAATGGAAATGTGCA GTTGACTGGATATCTGGTGTATGCGAAAGCGCAACAAATGGATCGCTATA CTTTATGAGTAAGGCTGAGAGGACTTTTGAATTTACAACAGAATTTGAAC TGAAGGTGACGCAGAACGTAGAAAGCAATGCGGATTTGGCTGTTCTACTG GCGCAAATCGGGACTGAGATAAGACGAAACGGGTTCATAGCTTTTTGGGA CTTGCAGAATCTGCTTTCATTCTCCCCTACAGAAGTGGAGGGCGCTAGGA TCATATCAACAAGAATGGACACAAGCGTACTAACCTCGTCTGGTATACGA GTGACTGGGACAATAGAGGCTTGGGCCTTAGGACTTTATGCAGGTTTCTG GTTGCTTTTTATATCGATATTGGTGGTTTTCCGACTCAGGTCATGGCCGG GGATTGACATTGAACGAATATACAGGTGGGTTGTGTGGCAGAGAGAAACC GTTTTCAACGCTTCGGTAACGCCGAGAACAGCGCCTACAGTTAGAATTGA AAGTACTCTGGAGGACGGAGCAGTGCAAATGAGGGCAAGTTATTTTGTGA AAGACGAAAACCCGATGGAGTTGCAGCAGGCTTAA back to topprotein sequence of Ggra11015.t1 >Ggra11015.t1 ID=Ggra11015.t1|Name=Ggra11015.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=795bp
MKLCVALSFSLALALASGARGEQQQRYAAEIVAAYLDDAPATAAAPALSA FASSSTASASAQSLSAGAAGKPSPAASGDGGGGGRTQLSLQPSAQTRAKV RSALRVARDRACAPALCFALDAGSRLTALEFRQQRDFTKLVSAIVALDER AAFAALQYTARVRRVSALTANATAFLQRVDGASRRCACAGAARGALEIRL FISLQSTMDTGIQVPVWNVLKYVVLTLLLAPLAETAMSQVTAWRHAYLVK RGKPIQLKASQWGNIALHQEVETNHVSGRFWQVFSILLALAIALPFEYSS GAKSQIVWSQQESRSSAVGTNGTDEIILLALDNPAGEPECVNPNTLASIG EFVFLKPREDKPPLLDGVVTLEDINNLLSVKYQGQSWQRRSLTSRRGETG LVLYTGGRSGQQAIIGDLERGGLLVADFESGSLCKGLLDDTFSCYDLTDK FTVSQLVHSLAAVRGSSMFLRTRFENAAKLFRFREAVVTISIGNPTVEEN LYDQRLNETGFEWLVRHRDEGGSPSLSISTLPLDKRLQSVSCQSVGSSRI RPLHLRVGEEFEGFKFEVNVSAKGDLNLVKTGTKLQTILLTEVGNEWKCA VDWISGVCESATNGSLYFMSKAERTFEFTTEFELKVTQNVESNADLAVLL AQIGTEIRRNGFIAFWDLQNLLSFSPTEVEGARIISTRMDTSVLTSSGIR VTGTIEAWALGLYAGFWLLFISILVVFRLRSWPGIDIERIYRWVVWQRET VFNASVTPRTAPTVRIESTLEDGAVQMRASYFVKDENPMELQQA* back to topmRNA from alignment at tig00000224_pilon:79495..82846- Legend: polypeptideCDSexonstart_codonintronstop_codon Hold the cursor over a type above to highlight its positions in the sequence below. >Ggra11015.t1 ID=Ggra11015.t1|Name=Ggra11015.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=3352bp|location=Sequence derived from alignment at tig00000224_pilon:79495..82846- (Gracilaria gracilis GNS1m male) ATGAAGCTGTGCGTCGCGCTCTCGTTCTCGCTCGCGCTCGCGCTCGCCTC
GGGCGCGCGCGGCGAGCAACAGCAGCGCTACGCCGCGGAGATCGTCGCGG
CGTATCTCGACGACGCGCCGGCGACCGCTGCCGCGCCCGCGCTGTCGGCG
TTCGCGTCGTCATCGACGGCGTCCGCCAGCGCGCAGTCGCTCTCCGCCGG
CGCCGCCGGCAAGCCATCGCCCGCGGCTTCCGGCGACGGCGGCGGCGGTG
GCCGCACGCAGCTGTCGCTGCAACCGAGCGCGCAGACACGCGCAAAGGTG
CGCTCCGCGCTGCGCGTCGCGCGCGACCGTGCGTGCGCGCCCGCGCTGTG
CTTCGCGCTGGACGCCGGCTCGCGACTGACGGCGCTAGAGTTTCGACAGC
AGCGGGACTTCACCAAGCTGGTGTCGGCCATCGTTGCGCTGGACGAGCGC
GCGGCGTTCGCGGCGCTGCAGTACACGGCGCGCGTGCGGCGTGTGTCGGC
GCTGACGGCCAACGCCACGGCGTTCCTGCAACGCGTGGACGGCGCCAGCA
GGCGCTGCGCGTGCGCGGGTGCCGCGCGGGGCGCGTGTGCGTGCGCGCGC
GAGTCGAAGGTGAGACGCGGCGTGAGCGGCTGCTCAAGGATGCTGCGGCG
CGTGCGCGGCGTGAGGAAGATGGTGGTGTTTGGCGACGCGCGCCACGGGC
TGCAGGGGCGCGCGGCCGATCGCTTCCTGGAGCGCGGAGACGCGCGCATC
TGTGGCGTGCAGGTGGGCGGCGAGAACGACGGCGGCCAGGCGCTCAATGA
GGCCGTGGGCGGCGGGGCGCACGTGCTGGCCGTCGACGGCTGGTACCGAG
TGGTGGACGTGGTCGAAGATTTGGTGCGCGCCGTTTGCGACGCGCCGCCG
CACTTTTGAGCGCGCATGAGCGCATGTGCGCGCAGAGGACGGCACGCGGC
GCGTGTGCGAGGTGGCGGCGCACGTGGCCACGCACCACTTTTCGCTCCGC
CGCTTCGTCGTTTCCACGTGTCGTTTCGCTGCGCGCCGCCAGCGCCGTGT
GCAGTTTGGAGCGCTCGACTTGTGTGCGACGATTGCACTACTTGTTCGCC
AGTGTCAAGATTGCTTCCAGATTGTGAACAATGTTTGTTTCTGAACTTCT
TATTGGCGAATTTGCATTCGTTATATGGATATAATTGTATGCCTAGATTT
ATGGATGAGAGGTGAGAGGAGCACCTGCTTCTGAACCAAATTCATTGTCT
TCGTGCTCGTAGCAACGCTTTTGCTTGTCGTTTCATTTGATGATTCACGA
GTACCTACACAAAGCTCACCCATGTAAAGTTAGATATGTATCATAGCAGT
CTACCAGAAGGGCAGTACTGTATGATAGATACTTTTAATATTGATGTGAA
GCTGCTTGTTACATATGGTACACTGTAGCTCGGTTACAGTCGTCAAAACC
CGGCAGCATCTCCTGCCCAGATATATTAGCCACTGGTTTCCCTTCCGTTC
TTCACAACTTTGTGCTCATCACTGGGGCTCCCGCAATCTGCTTTCTTCTT
CAGTGGAAATTCGCCTGTTCATTTCGCTGCAATCCACAATGGATACCGGA
ATTCAAGTGCCGGTCTGGAACGTTCTCAAATATGTCGTGCTTACACTGCT
CCTTGCTCCGTTAGCGGAGACAGCAATGAGCCAAGTCACGGCCTGGAGAC
ACGCCTACCTCGTCAAGAGGGGCAAACCTATACAACTCAAGGCTTCCCAA
TGGGGTAACATTGCACTTCATCAAGAAGTCGAAACCAATCATGTTTCGGG
CAGATTCTGGCAGGTTTTTTCCATATTGCTCGCATTGGCAATTGCACTAC
CGTTCGAATATAGCAGTGGCGCCAAATCGCAAATCGTTTGGTCCCAACAG
GAATCGCGTTCATCAGCAGTTGGGACAAATGGCACCGATGAAATCATTTT
GCTAGCTCTGGACAACCCTGCAGGTGAACCTGAATGTGTCAATCCCAACA
CATTAGCTAGCATTGGTGAATTTGTCTTCTTGAAGCCCAGAGAAGATAAA
CCCCCACTACTGGATGGGGTTGTCACACTCGAAGATATCAACAATCTATT
ATCAGTCAAATACCAAGGACAAAGTTGGCAACGGAGGTCCCTGACATCCA
GAAGAGGAGAAACGGGCCTTGTTCTGTATACGGGTGGCCGCAGTGGACAA
CAAGCCATAATTGGAGATCTCGAAAGAGGAGGGTTATTGGTAGCCGATTT
TGAAAGCGGATCGTTATGCAAGGGGTTGCTGGATGATACGTTCTCGTGCT
ACGACCTGACGGACAAGTTCACAGTGTCCCAATTAGTACACTCTCTGGCG
GCTGTACGTGGAAGTTCTATGTTTCTTAGGACGCGCTTCGAAAACGCAGC
CAAGCTGTTTAGGTTCAGGGAAGCAGTGGTCACCATCAGTATTGGGAACC
CGACTGTGGAGGAGAATCTGTATGACCAAAGGTTGAATGAAACCGGTTTT
GAGTGGCTAGTGCGTCATAGAGACGAAGGTGGGAGTCCTAGTTTGTCGAT
TTCGACGCTGCCTTTGGATAAGCGCCTGCAATCAGTGAGCTGCCAATCTG
TCGGGTCGTCCCGAATTCGCCCGCTCCATCTCAGGGTCGGTGAAGAATTC
GAAGGCTTTAAGTTTGAGGTAAACGTATCGGCTAAGGGCGACCTCAATCT
GGTTAAGACAGGGACAAAACTGCAGACTATCCTTCTAACGGAAGTGGGAA
ACGAATGGAAATGTGCAGTTGACTGGATATCTGGTGTATGCGAAAGCGCA
ACAAATGGATCGCTATACTTTATGAGTAAGGCTGAGAGGACTTTTGAATT
TACAACAGAATTTGAACTGAAGGTGACGCAGAACGTAGAAAGCAATGCGG
ATTTGGCTGTTCTACTGGCGCAAATCGGGACTGAGATAAGACGAAACGGG
TTCATAGCTTTTTGGGACTTGCAGAATCTGCTTTCATTCTCCCCTACAGA
AGTGGAGGGCGCTAGGATCATATCAACAAGAATGGACACAAGCGTACTAA
CCTCGTCTGGTATACGAGTGACTGGGACAATAGAGGCTTGGGCCTTAGGA
CTTTATGCAGGTTTCTGGTTGCTTTTTATATCGATATTGGTGGTTTTCCG
ACTCAGGTCATGGCCGGGGATTGACATTGAACGAATATACAGGTGGGTTG
TGTGGCAGAGAGAAACCGTTTTCAACGCTTCGGTAACGCCGAGAACAGCG
CCTACAGTTAGAATTGAAAGTACTCTGGAGGACGGAGCAGTGCAAATGAG
GGCAAGTTATTTTGTGAAAGACGAAAACCCGATGGAGTTGCAGCAGGCTT
AA back to topCoding sequence (CDS) from alignment at tig00000224_pilon:79495..82846- >Ggra11015.t1 ID=Ggra11015.t1|Name=Ggra11015.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=2385bp|location=Sequence derived from alignment at tig00000224_pilon:79495..82846- (Gracilaria gracilis GNS1m male) ATGAAGCTGTGCGTCGCGCTCTCGTTCTCGCTCGCGCTCGCGCTCGCCTC GGGCGCGCGCGGCGAGCAACAGCAGCGCTACGCCGCGGAGATCGTCGCGG CGTATCTCGACGACGCGCCGGCGACCGCTGCCGCGCCCGCGCTGTCGGCG TTCGCGTCGTCATCGACGGCGTCCGCCAGCGCGCAGTCGCTCTCCGCCGG CGCCGCCGGCAAGCCATCGCCCGCGGCTTCCGGCGACGGCGGCGGCGGTG GCCGCACGCAGCTGTCGCTGCAACCGAGCGCGCAGACACGCGCAAAGGTG CGCTCCGCGCTGCGCGTCGCGCGCGACCGTGCGTGCGCGCCCGCGCTGTG CTTCGCGCTGGACGCCGGCTCGCGACTGACGGCGCTAGAGTTTCGACAGC AGCGGGACTTCACCAAGCTGGTGTCGGCCATCGTTGCGCTGGACGAGCGC GCGGCGTTCGCGGCGCTGCAGTACACGGCGCGCGTGCGGCGTGTGTCGGC GCTGACGGCCAACGCCACGGCGTTCCTGCAACGCGTGGACGGCGCCAGCA GGCGCTGCGCGTGCGCGGGTGCCGCGCGGGGCGCGTTGGAAATTCGCCTG TTCATTTCGCTGCAATCCACAATGGATACCGGAATTCAAGTGCCGGTCTG GAACGTTCTCAAATATGTCGTGCTTACACTGCTCCTTGCTCCGTTAGCGG AGACAGCAATGAGCCAAGTCACGGCCTGGAGACACGCCTACCTCGTCAAG AGGGGCAAACCTATACAACTCAAGGCTTCCCAATGGGGTAACATTGCACT TCATCAAGAAGTCGAAACCAATCATGTTTCGGGCAGATTCTGGCAGGTTT TTTCCATATTGCTCGCATTGGCAATTGCACTACCGTTCGAATATAGCAGT GGCGCCAAATCGCAAATCGTTTGGTCCCAACAGGAATCGCGTTCATCAGC AGTTGGGACAAATGGCACCGATGAAATCATTTTGCTAGCTCTGGACAACC CTGCAGGTGAACCTGAATGTGTCAATCCCAACACATTAGCTAGCATTGGT GAATTTGTCTTCTTGAAGCCCAGAGAAGATAAACCCCCACTACTGGATGG GGTTGTCACACTCGAAGATATCAACAATCTATTATCAGTCAAATACCAAG GACAAAGTTGGCAACGGAGGTCCCTGACATCCAGAAGAGGAGAAACGGGC CTTGTTCTGTATACGGGTGGCCGCAGTGGACAACAAGCCATAATTGGAGA TCTCGAAAGAGGAGGGTTATTGGTAGCCGATTTTGAAAGCGGATCGTTAT GCAAGGGGTTGCTGGATGATACGTTCTCGTGCTACGACCTGACGGACAAG TTCACAGTGTCCCAATTAGTACACTCTCTGGCGGCTGTACGTGGAAGTTC TATGTTTCTTAGGACGCGCTTCGAAAACGCAGCCAAGCTGTTTAGGTTCA GGGAAGCAGTGGTCACCATCAGTATTGGGAACCCGACTGTGGAGGAGAAT CTGTATGACCAAAGGTTGAATGAAACCGGTTTTGAGTGGCTAGTGCGTCA TAGAGACGAAGGTGGGAGTCCTAGTTTGTCGATTTCGACGCTGCCTTTGG ATAAGCGCCTGCAATCAGTGAGCTGCCAATCTGTCGGGTCGTCCCGAATT CGCCCGCTCCATCTCAGGGTCGGTGAAGAATTCGAAGGCTTTAAGTTTGA GGTAAACGTATCGGCTAAGGGCGACCTCAATCTGGTTAAGACAGGGACAA AACTGCAGACTATCCTTCTAACGGAAGTGGGAAACGAATGGAAATGTGCA GTTGACTGGATATCTGGTGTATGCGAAAGCGCAACAAATGGATCGCTATA CTTTATGAGTAAGGCTGAGAGGACTTTTGAATTTACAACAGAATTTGAAC TGAAGGTGACGCAGAACGTAGAAAGCAATGCGGATTTGGCTGTTCTACTG GCGCAAATCGGGACTGAGATAAGACGAAACGGGTTCATAGCTTTTTGGGA CTTGCAGAATCTGCTTTCATTCTCCCCTACAGAAGTGGAGGGCGCTAGGA TCATATCAACAAGAATGGACACAAGCGTACTAACCTCGTCTGGTATACGA GTGACTGGGACAATAGAGGCTTGGGCCTTAGGACTTTATGCAGGTTTCTG GTTGCTTTTTATATCGATATTGGTGGTTTTCCGACTCAGGTCATGGCCGG GGATTGACATTGAACGAATATACAGGTGGGTTGTGTGGCAGAGAGAAACC GTTTTCAACGCTTCGGTAACGCCGAGAACAGCGCCTACAGTTAGAATTGA AAGTACTCTGGAGGACGGAGCAGTGCAAATGAGGGCAAGTTATTTTGTGA AAGACGAAAACCCGATGGAGTTGCAGCAGGCTTAA back to top
|