Ggra6.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra6.t1
Unique NameGgra6.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length203
Homology
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BLAST of Ggra6.t1 vs. uniprot
Match: A0A2V3IDP1 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IDP1_9FLOR)

HSP 1 Score: 171 bits (433), Expect = 1.470e-50
Identity = 77/201 (38.31%), Postives = 116/201 (57.71%), Query Frame = 0 
Query:    1 MVASMNTLALFSVLLACMSFIDSAESKLFPTVFGAGRPSYKAAIKSHSVERLAEQYCEDIIKTSECGVCAQCDMSKETCTQLFKTDTCWPTPQEPNCNTCFEEYGDTIFPARLFKEASSYTGFSRFGRVSQRKALFSHIVDPQLCVLFKQEGICKECSKCMGTGTGFSDCKSLFQTEKCWPVPTEESCYKCFEEFGAGVFP 201
            MVAS N+L+   VL A    + S E+      FGA RP + +A  +    R+ E YC + IK+ EC +CA+C++ +  C  LFKTDTCWP P E  C  C++E+G +IFP R+   A +   +  +    +R+   +  VDP +C       +C +C  CMG G+ + +CK+ FQT+KCWP P    C++CF+EFG+ + P
Sbjct:    1 MVASANSLSTCKVLFALSCCLVSCEASFLSGRFGASRPLFGSAYLAPFRGRVPEAYCAEAIKSKECELCAECNVDEGKCVDLFKTDTCWPGPNEEVCLRCYDEFGASIFPKRVLTNARTKMAYKSY----RRRTGSARFVDPAMCDTLNSAMVCTDCETCMGDGSKYGNCKAYFQTDKCWPAPQSPECFECFDEFGSSILP 197
The following BLAST results are available for this feature:
BLAST of Ggra6.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IDP11.470e-5038.31Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 27..202
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 7..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..26
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 19..26
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..6

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000223_piloncontigtig00000223_pilon:18955..19563 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra6.t1Ggra6.t1Gracilaria gracilis GNS1m malemRNAtig00000223_pilon 18955..19563 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra6.t1 ID=Ggra6.t1|Name=Ggra6.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=203bp
MVASMNTLALFSVLLACMSFIDSAESKLFPTVFGAGRPSYKAAIKSHSVE
RLAEQYCEDIIKTSECGVCAQCDMSKETCTQLFKTDTCWPTPQEPNCNTC
FEEYGDTIFPARLFKEASSYTGFSRFGRVSQRKALFSHIVDPQLCVLFKQ
EGICKECSKCMGTGTGFSDCKSLFQTEKCWPVPTEESCYKCFEEFGAGVF
PQ*
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