Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following start_codon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| Ggra10009.t1.start1 | Ggra10009.t1.start1 | Gracilaria gracilis GNS1m male | start_codon | tig00000222_pilon 47583..47585 + |
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following intron feature(s) are a part of this mRNA:
The following stop_codon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| Ggra10009.t1.stop1 | Ggra10009.t1.stop1 | Gracilaria gracilis GNS1m male | stop_codon | tig00000222_pilon 49855..49857 + |
Sequences
The following sequences are available for this feature:
mRNA sequence >Ggra10009.t1 ID=Ggra10009.t1|Name=Ggra10009.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=668bp
MASGPLPDRDMDDDDEFEWQQIAEMMNVIEQEYKDARNSFGSEPNAPSPA
DHGNPFNSNATPLAPPRALQPVPNLQQNTVPHNTGDAVPQVQEPRFQGIP
QAQNGLHAKAPNIQSSNMAPISLVAQPVVSNAMSDTQAAQGRPVADVSEL
QGLVEQQRGSLANHQNRMQAMQAELDSLRALDVEKMRTENTRLTAALTAA
TQESARLQEQLSYAKQELSSLRDRRRVEAVAMSHDAEGTQQATSQGTGTQ
VPGTQPPASQAPAPQAPGTQMITRIRRNVPSSSQRPPLGKSLRRPRALDL
RTSARTESKENGTPASEKASEPRKTNQGLQRVEPRTASWQLELHDSMNNT
TKAALREHLFSGTTGPSLWELARVAGQEHLREAMLAGISNDEEWPSLLEP
LSDVLNAGRGAALISLHCTYGLLVYSDQCRRNIEALLAITGNMTETLKGA
AKRVDFEIADKCLQVLRVMFDAVVINGSEEQLTHFRTQVFGDVVLNWTRP
QSSPCDDELRVLEETLTAASDVLRAERYPPQSALAILTSAACHAPSTIDE
NGVAALADACVHAIQTLRVSDWCSQEQKDKLGWKEDIVSHVRERKKLAGF
VRGCIATLALVARTRNLVLRKSERNVVLGVLSDGLDGVSKKRGYLSELEW
RHLLLLQRQKLCRPFIP* back to topspliced messenger RNA >Ggra10009.t1 ID=Ggra10009.t1|Name=Ggra10009.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=2004bp|location=Sequence derived from alignment at tig00000222_pilon:47583..49857+ (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.
ATGGCTTCAGGGCCTTTGCCAGACCGCGATATGGATGATGATGATGAATT
TGAATGGCAGCAAATCGCGGAGATGATGAATGTTATAGAACAAGAATACA
AGGATGCTCGGAATTCTTTCGGGAGTGAACCTAATGCCCCATCTCCAGCA
GACCATGGAAACCCTTTCAACTCTAACGCAACGCCCTTGGCGCCTCCTCG
AGCCCTACAGCCTGTGCCGAATCTGCAGCAGAATACGGTACCACATAACA
CGGGCGATGCCGTTCCGCAAGTACAAGAGCCCCGTTTCCAGGGGATTCCA
CAAGCTCAAAATGGTCTTCATGCCAAGGCTCCTAACATCCAATCGTCGAA
TATGGCCCCGATTTCCCTTGTCGCTCAACCAGTAGTCTCGAACGCAATGT
CTGACACACAAGCAGCACAAGGAAGACCGGTGGCAGATGTTTCTGAGCTA
CAAGGGTTAGTAGAACAACAACGTGGCTCACTTGCCAACCACCAGAATCG
AATGCAAGCCATGCAGGCCGAGTTGGACTCGCTGCGCGCTCTAGATGTTG
AGAAGATGCGCACTGAAAACACCCGTCTGACTGCGGCTCTGACAGCTGCA
ACTCAGGAGAGCGCTCGTTTGCAGGAACAATTAAGCTATGCAAAACAAGA
GCTGTCTTCCTTACGCGACCGTCGAAGAGTTGAAGCGGTTGCCATGTCAC
ATGACGCTGAGGGAACGCAACAGGCAACTTCACAAGGAACTGGAACACAG
GTACCCGGTACACAGCCACCCGCCTCACAGGCGCCTGCCCCTCAAGCCCC
TGGCACTCAGATGATAACCCGAATAAGAAGAAACGTTCCGTCATCTTCAC
AAAGACCTCCACTTGGAAAATCCCTTCGACGACCACGCGCACTCGACCTG
AGAACTTCAGCAAGAACTGAGAGCAAGGAAAATGGCACTCCTGCAAGCGA
AAAAGCGAGTGAACCCCGGAAGACGAACCAGGGTTTACAAAGAGTGGAGC
CGCGTACTGCTAGCTGGCAACTAGAGCTGCATGATTCCATGAACAATACA
ACTAAGGCGGCGCTTCGCGAGCATCTGTTCTCAGGAACAACCGGGCCATC
TCTTTGGGAGTTGGCGCGTGTTGCTGGCCAGGAGCACTTGCGAGAAGCTA
TGCTTGCGGGCATAAGTAATGACGAGGAATGGCCAAGCCTTTTGGAACCT
TTGTCTGATGTTCTAAATGCTGGCAGAGGAGCTGCCTTAATATCCTTGCA
TTGTACTTACGGATTACTCGTCTATTCCGACCAATGTCGGCGAAACATAG
AGGCATTGCTGGCCATAACTGGTAACATGACGGAAACGCTCAAAGGAGCT
GCGAAACGCGTCGATTTCGAGATAGCCGATAAATGTTTACAAGTTCTACG
AGTAATGTTTGATGCGGTGGTAATCAACGGGAGTGAGGAACAGTTAACGC
ACTTCAGAACCCAGGTTTTCGGGGACGTTGTGCTAAACTGGACGAGGCCT
CAAAGCTCGCCGTGTGACGACGAGTTGCGTGTTCTTGAGGAAACTCTCAC
TGCAGCCAGCGATGTTCTTCGGGCCGAACGATATCCTCCGCAGTCTGCTC
TGGCAATTTTGACGAGTGCAGCGTGTCACGCTCCATCGACCATAGATGAG
AATGGTGTGGCTGCTCTAGCGGATGCTTGTGTTCATGCTATTCAGACTCT
TCGCGTTTCAGATTGGTGCTCACAGGAGCAAAAAGACAAACTAGGGTGGA
AAGAAGATATCGTTTCGCATGTTAGAGAAAGAAAGAAACTAGCCGGATTT
GTTCGAGGTTGCATCGCTACTCTTGCACTGGTAGCTAGAACTAGGAACCT
TGTGCTTCGAAAATCCGAACGAAATGTTGTTCTGGGTGTGCTTTCCGACG
GTTTGGATGGCGTTTCGAAGAAAAGGGGGTATCTGAGTGAACTGGAGTGG
AGACAtcttcttcttcttcaacgccaaaaactttgccggccattcattcc
ttaa back to topprotein sequence of Ggra10009.t1 >Ggra10009.t1 ID=Ggra10009.t1|Name=Ggra10009.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=668bp
MASGPLPDRDMDDDDEFEWQQIAEMMNVIEQEYKDARNSFGSEPNAPSPA
DHGNPFNSNATPLAPPRALQPVPNLQQNTVPHNTGDAVPQVQEPRFQGIP
QAQNGLHAKAPNIQSSNMAPISLVAQPVVSNAMSDTQAAQGRPVADVSEL
QGLVEQQRGSLANHQNRMQAMQAELDSLRALDVEKMRTENTRLTAALTAA
TQESARLQEQLSYAKQELSSLRDRRRVEAVAMSHDAEGTQQATSQGTGTQ
VPGTQPPASQAPAPQAPGTQMITRIRRNVPSSSQRPPLGKSLRRPRALDL
RTSARTESKENGTPASEKASEPRKTNQGLQRVEPRTASWQLELHDSMNNT
TKAALREHLFSGTTGPSLWELARVAGQEHLREAMLAGISNDEEWPSLLEP
LSDVLNAGRGAALISLHCTYGLLVYSDQCRRNIEALLAITGNMTETLKGA
AKRVDFEIADKCLQVLRVMFDAVVINGSEEQLTHFRTQVFGDVVLNWTRP
QSSPCDDELRVLEETLTAASDVLRAERYPPQSALAILTSAACHAPSTIDE
NGVAALADACVHAIQTLRVSDWCSQEQKDKLGWKEDIVSHVRERKKLAGF
VRGCIATLALVARTRNLVLRKSERNVVLGVLSDGLDGVSKKRGYLSELEW
RHLLLLQRQKLCRPFIP* back to topmRNA from alignment at tig00000222_pilon:47583..49857+ Legend: polypeptidestart_codonCDSexonintronstop_codon Hold the cursor over a type above to highlight its positions in the sequence below. >Ggra10009.t1 ID=Ggra10009.t1|Name=Ggra10009.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=2275bp|location=Sequence derived from alignment at tig00000222_pilon:47583..49857+ (Gracilaria gracilis GNS1m male)
ATGGCTTCAGGGCCTTTGCCAGACCGCGATATGGATGATGATGATGAATT
TGAATGGCAGCAAATCGCGGAGATGATGAATGTTATAGAACAAGAATACA
AGGATGCTCGGAATTCTTTCGGGAGTGAACCTAATGCCCCATCTCCAGCA
GACCATGGAAACCCTTTCAACTCTAACGCAACGCCCTTGGCGCCTCCTCG
AGCCCTACAGCCTGTGCCGAATCTGCAGCAGAATACGGTACCACATAACA
CGGGCGATGCCGTTCCGCAAGTACAAGAGCCCCGTTTCCAGGGGATTCCA
CAAGCTCAAAATGGTCTTCATGCCAAGGCTCCTAACATCCAATCGTCGAA
TATGGCCCCGATTTCCCTTGTCGCTCAACCAGTAGTCTCGAACGCAATGT
CTGACACACAAGCAGCACAAGGAAGACCGGTGGCAGATGTTTCTGAGCTA
CAAGGGTTAGTAGAACAACAACGTGGCTCACTTGCCAACCACCAGAATCG
AATGCAAGCCATGCAGGCCGAGTTGGACTCGCTGCGCGCTCTAGATGTTG
AGAAGATGCGCACTGAAAACACCCGTCTGACTGCGGCTCTGACAGCTGCA
ACTCAGGAGAGCGCTCGTTTGCAGGAACAATTAAGCTATGCAAAACAAGA
GCTGTCTTCCTTACGCGACCGTCGAAGAGTTGAAGCGGTTGCCATGTCAC
ATGACGCTGAGGGAACGCAACAGGCAACTTCACAAGGAACTGGAACACAG
GTACCCGGTACACAGCCACCCGCCTCACAGGCGCCTGCCCCTCAAGCCCC
TGGCACTCAGATGATAACCCGAATAAGAAGAAACGTTCCGTCATCTTCAC
AAAGACCTCCACTTGGAAAATCCCTTCGACGACCACGCGCACTCGACCTG
AGAACTTCAGCAAGAACTGAGAGCAAGGAAAATGGCACTCCTGCAAGCGA
AAAAGCGAGTGAACCCCGGAAGACGAACCAGGGTTTACAAAGAGTGGAGC
CGCGTACTGCTAGCTGGCAACTAGAGCTGCATGATTCCATGAACAATACA
ACTAAGGCGGCGCTTCGCGAGCATCTGTTCTCAGGAACAACCGGGCCATC
TCTTTGGGAGTTGGCGCGTGTTGCTGGCCAGGAGCACTTGCGAGAAGCTA
TGCTTGCGGGCATAAGTAATGACGAGGAATGGCCAAGCCTTTTGGAACCT
TTGTCTGATGTTCTAAATGCTGGCAGAGGAGCTGCCTTAATATCCTTGCA
TTGTACTTACGGATTACTCGTCTATTCCGACCAATGTCGGCGAAACATAG
AGGCATTGCTGGCCATAACTGGTAACATGACGGAAACGCTCAAAGGAGCT
GCGAAACGCGTCGATTTCGAGATAGCCGATAAATGTTTACAAGTTCTACG
AGTAATGTTTGATGCGGTGGTAATCAACGGGAGTGAGGAACAGTTAACGC
ACTTCAGAACCCAGGTTTTCGGGGACGTTGTGCTAAACTGGACGAGGCGT
ATGCGAGTCTTACCAACTTCTATTCCTCGAAGTCAACGAAAACTAAGCTC
AAAGGTACGACATTCAGCACTTTCTGTTCTGGAAGTAGGCGTTAGTGAGT
GTCTGACGTCGTTAAGCTCGCCGTGTGACGACGAGTTGCGTGTTCTTGAG
GAAACTCTCACTGCAGCCAGCGATGTTCTTCGGGCCGAACGATATCCTCC
GCAGTCTGCTCTGGCAATTTTGACGAGTGCAGCGTGTCACGCTCCATCGA
CCATAGATGAGAATGGTGTGGCTGCTCTAGCGGATGCTTGTGTTCATGCT
ATTCAGACTCTTCGCGTTTCAGATTGGTGCTCACAGGAGCAAAAAGACAA
ACTAGGGTGGAAAGAAGATATCGTTTCGCATGTTAGAGAAAGAAAGAAAC
TAGCCGGATTTGTTCGAGGTTGCATCGCTACTCTTGCACTGGTAGCTAGA
ACTAGGAACCTTGTGCTTCGAAAATCCGAACGAAATGTTGTTCTGGGTGT
GCTTTCCGTACTTGCTTGGCCTGCTCAGCGGAAAGATTCTTTCCATCCAC
CGAAAGAGCTGCGTGGAGAAACATTTGCAGCAGAGTGCAGGACGGTTTGG
ATGGCGTTTCGAAGAAAAGGGGGTATCTGAGTGAACTGGAGTGGAGACAt
cttcttcttcttcgtaagtgtggttcattacttctaattgcgaagtgatg
agagtgctaaagtacttacatgtagccttctctcctaaagaacgccaaaa
actttgccggccattcattccttaa back to topCoding sequence (CDS) from alignment at tig00000222_pilon:47583..49857+ >Ggra10009.t1 ID=Ggra10009.t1|Name=Ggra10009.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=2004bp|location=Sequence derived from alignment at tig00000222_pilon:47583..49857+ (Gracilaria gracilis GNS1m male)
ATGGCTTCAGGGCCTTTGCCAGACCGCGATATGGATGATGATGATGAATT
TGAATGGCAGCAAATCGCGGAGATGATGAATGTTATAGAACAAGAATACA
AGGATGCTCGGAATTCTTTCGGGAGTGAACCTAATGCCCCATCTCCAGCA
GACCATGGAAACCCTTTCAACTCTAACGCAACGCCCTTGGCGCCTCCTCG
AGCCCTACAGCCTGTGCCGAATCTGCAGCAGAATACGGTACCACATAACA
CGGGCGATGCCGTTCCGCAAGTACAAGAGCCCCGTTTCCAGGGGATTCCA
CAAGCTCAAAATGGTCTTCATGCCAAGGCTCCTAACATCCAATCGTCGAA
TATGGCCCCGATTTCCCTTGTCGCTCAACCAGTAGTCTCGAACGCAATGT
CTGACACACAAGCAGCACAAGGAAGACCGGTGGCAGATGTTTCTGAGCTA
CAAGGGTTAGTAGAACAACAACGTGGCTCACTTGCCAACCACCAGAATCG
AATGCAAGCCATGCAGGCCGAGTTGGACTCGCTGCGCGCTCTAGATGTTG
AGAAGATGCGCACTGAAAACACCCGTCTGACTGCGGCTCTGACAGCTGCA
ACTCAGGAGAGCGCTCGTTTGCAGGAACAATTAAGCTATGCAAAACAAGA
GCTGTCTTCCTTACGCGACCGTCGAAGAGTTGAAGCGGTTGCCATGTCAC
ATGACGCTGAGGGAACGCAACAGGCAACTTCACAAGGAACTGGAACACAG
GTACCCGGTACACAGCCACCCGCCTCACAGGCGCCTGCCCCTCAAGCCCC
TGGCACTCAGATGATAACCCGAATAAGAAGAAACGTTCCGTCATCTTCAC
AAAGACCTCCACTTGGAAAATCCCTTCGACGACCACGCGCACTCGACCTG
AGAACTTCAGCAAGAACTGAGAGCAAGGAAAATGGCACTCCTGCAAGCGA
AAAAGCGAGTGAACCCCGGAAGACGAACCAGGGTTTACAAAGAGTGGAGC
CGCGTACTGCTAGCTGGCAACTAGAGCTGCATGATTCCATGAACAATACA
ACTAAGGCGGCGCTTCGCGAGCATCTGTTCTCAGGAACAACCGGGCCATC
TCTTTGGGAGTTGGCGCGTGTTGCTGGCCAGGAGCACTTGCGAGAAGCTA
TGCTTGCGGGCATAAGTAATGACGAGGAATGGCCAAGCCTTTTGGAACCT
TTGTCTGATGTTCTAAATGCTGGCAGAGGAGCTGCCTTAATATCCTTGCA
TTGTACTTACGGATTACTCGTCTATTCCGACCAATGTCGGCGAAACATAG
AGGCATTGCTGGCCATAACTGGTAACATGACGGAAACGCTCAAAGGAGCT
GCGAAACGCGTCGATTTCGAGATAGCCGATAAATGTTTACAAGTTCTACG
AGTAATGTTTGATGCGGTGGTAATCAACGGGAGTGAGGAACAGTTAACGC
ACTTCAGAACCCAGGTTTTCGGGGACGTTGTGCTAAACTGGACGAGGCCT
CAAAGCTCGCCGTGTGACGACGAGTTGCGTGTTCTTGAGGAAACTCTCAC
TGCAGCCAGCGATGTTCTTCGGGCCGAACGATATCCTCCGCAGTCTGCTC
TGGCAATTTTGACGAGTGCAGCGTGTCACGCTCCATCGACCATAGATGAG
AATGGTGTGGCTGCTCTAGCGGATGCTTGTGTTCATGCTATTCAGACTCT
TCGCGTTTCAGATTGGTGCTCACAGGAGCAAAAAGACAAACTAGGGTGGA
AAGAAGATATCGTTTCGCATGTTAGAGAAAGAAAGAAACTAGCCGGATTT
GTTCGAGGTTGCATCGCTACTCTTGCACTGGTAGCTAGAACTAGGAACCT
TGTGCTTCGAAAATCCGAACGAAATGTTGTTCTGGGTGTGCTTTCCGACG
GTTTGGATGGCGTTTCGAAGAAAAGGGGGTATCTGAGTGAACTGGAGTGG
AGACAtcttcttcttcttcaacgccaaaaactttgccggccattcattcc
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