Ggra10009.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra10009.t1
Unique NameGgra10009.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length668
Homology
BLAST of Ggra10009.t1 vs. uniprot
Match: A0A2V3IN24 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IN24_9FLOR)

HSP 1 Score: 465 bits (1196), Expect = 6.560e-152
Identity = 308/688 (44.77%), Postives = 422/688 (61.34%), Query Frame = 0
Query:    1 MASGPLPDRDMDDDDEFEWQQIAEMMNVIEQEYKDARNSFGSEPNAPSPADHGNPFNSNATPLAPPRALQPVPNLQ---QNTVPHNTGDA--VPQVQE-PRFQGIPQAQNGLHAK--AP--NIQSSNMAPISLVAQPVVSNAMSDTQAAQGRPVADVSELQGLVEQQRGSLANHQNRMQAMQAELDSLRALDVEKMRTENTRLTAALTAATQESARLQEQLSYAKQELSSLRDRRRVEAVAM--SHDAEGTQQATSQGTGTQVXXXXXXXXXXXXXXXXGTQMITRIRRNVPSSSQRPPLGKSLRRPRALDLRTSARTESKENGTPASEKASEPR------KTNQGLQRVEPRTASWQLELHDSMNNTTKAALREHLFSGTTGPSLWELARVAGQEHLREAMLAGISNDEEWPSLLEPLSDVLNAGRGAALISLHCTYGLLVYSDQCRRNIEALLAITGNMTETLKGAAKRVDFEIADKCLQVLRVMFDAVVINGSEEQLTHFRTQVFGDVVLNWTR-------------------------------------PQSSPCDDELRVLEETLTAASDVLRAERYPPQSALAILTSAACHAPSTIDENGVAALADACVHAIQTLRVSDWCSQEQKDKLG-WKEDIVSHVRERKKLAGFVRGCIATLALVARTRNLVLRKSERNVVLGVLS 632
            MA+   P+ D+++D+E EWQ+IAE ++ IE++Y +ARNS G                ++A P  P  A+   P+     Q T P +T  A   P V+E P    + +  N   A   +P  N++ S ++P     QP    A S  +A+     +DV  LQ L+EQQRGSLANHQNR+++MQAELD  R LDVEKMR++N RL++AL+ AT ES RLQEQLSY KQEL+SLRDRRR E++AM  S++ + +Q A +       XXX                 + R   + P  SQ  P+    R PR    R +A  ES    T A   +++ R      +T Q ++  E  T+ W L L D+M+N T  ALR+HLFSG +G SLW+L RVAGQE LR+A+L+G+  D++WP +LEP++ +L AGR A+L +L+C YGL+VYS+QC+R + AL  +   + E LKGAA+R DF IA+KCL VLR + DAV+ NG EE++   R Q+F D VL+WTR                                       S PCD++LRVL+E LTAAS+ +R+E  PPQ+AL+++ SAACHAP TID+NGVAAL DACVH IQTLRV+D  +++++ ++  W E+IV+  RERKK+AG VR CIATLAL++RT +LVLRKSERNVVLGVL+
Sbjct:    1 MATPHSPEGDIEEDEEIEWQKIAEAIDGIEKQYINARNSVGG---------------ASAVPFLPQNAIPSFPSALPAVQATTPPSTHPAPVAPAVREAPSHLVLSRVLNPPCADRISPGFNVRPSAVSP-GTEPQP----ATSVPEASLQNQTSDVVRLQSLLEQQRGSLANHQNRIRSMQAELDLFRGLDVEKMRSDNARLSSALSTATAESVRLQEQLSYVKQELASLRDRRRAESIAMGASNEVDVSQVACTXXXXXXXXXXQKGDALAAATQSTPNHKVRRT--HDPWQSQYLPI----RVPRRKK-RLAAANESNTEPTAALISSTQARDTKPQMRTPQSVKGAEA-TSCWSLSLDDTMSNATNLALRQHLFSGASGSSLWQLVRVAGQERLRDALLSGMGRDDDWPLVLEPMATLLKAGRRASLTALNCLYGLIVYSEQCQRKVAALPMVATYVMEALKGAAERADFTIAEKCLNVLRALLDAVITNGEEEEVVRIRRQLFSDDVLHWTRRMRTLPSSVLDEQRKLILGVRDAALSVLVLGATACMTSSSPPCDEDLRVLDEALTAASNAIRSEVSPPQAALSMMISAACHAPLTIDDNGVAALVDACVHGIQTLRVADEHAKKREKRVRPWPEEIVALERERKKVAGMVRSCIATLALLSRTADLVLRKSERNVVLGVLA 660          
The following BLAST results are available for this feature:
BLAST of Ggra10009.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IN246.560e-15244.77Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 183..224
NoneNo IPR availableCOILSCoilCoilcoord: 154..181
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 41..64
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 264..288
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 292..317
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 236..256
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 225..333
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..106
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 71..86
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 318..333

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000222_piloncontigtig00000222_pilon:47583..49857 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra10009.t1Ggra10009.t1Gracilaria gracilis GNS1m malemRNAtig00000222_pilon 47583..49857 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra10009.t1 ID=Ggra10009.t1|Name=Ggra10009.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=668bp
MASGPLPDRDMDDDDEFEWQQIAEMMNVIEQEYKDARNSFGSEPNAPSPA
DHGNPFNSNATPLAPPRALQPVPNLQQNTVPHNTGDAVPQVQEPRFQGIP
QAQNGLHAKAPNIQSSNMAPISLVAQPVVSNAMSDTQAAQGRPVADVSEL
QGLVEQQRGSLANHQNRMQAMQAELDSLRALDVEKMRTENTRLTAALTAA
TQESARLQEQLSYAKQELSSLRDRRRVEAVAMSHDAEGTQQATSQGTGTQ
VPGTQPPASQAPAPQAPGTQMITRIRRNVPSSSQRPPLGKSLRRPRALDL
RTSARTESKENGTPASEKASEPRKTNQGLQRVEPRTASWQLELHDSMNNT
TKAALREHLFSGTTGPSLWELARVAGQEHLREAMLAGISNDEEWPSLLEP
LSDVLNAGRGAALISLHCTYGLLVYSDQCRRNIEALLAITGNMTETLKGA
AKRVDFEIADKCLQVLRVMFDAVVINGSEEQLTHFRTQVFGDVVLNWTRP
QSSPCDDELRVLEETLTAASDVLRAERYPPQSALAILTSAACHAPSTIDE
NGVAALADACVHAIQTLRVSDWCSQEQKDKLGWKEDIVSHVRERKKLAGF
VRGCIATLALVARTRNLVLRKSERNVVLGVLSDGLDGVSKKRGYLSELEW
RHLLLLQRQKLCRPFIP*
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