Ggra7009.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra7009.t1
Unique NameGgra7009.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length340
Homology
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BLAST of Ggra7009.t1 vs. uniprot
Match: A0A2V3IVP8 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IVP8_9FLOR)

HSP 1 Score: 313 bits (802), Expect = 2.540e-102
Identity = 173/342 (50.58%), Postives = 231/342 (67.54%), Query Frame = 0 
Query:    1 MSVKIAFFVIILSLTTFTCGTRIITTTLQVPHQLWDLTDNNMRTTTVPFTLYARRPVRKSPLVIILPGALLQASDYQDLSSAFAYRGFVVAVPQYDQREQPFSSRSAILRAHLSFTSSLKPPCPANGQFSSAALVSTFLSYV-SRSS-HSHWLLRKILVDRTVIFGHSFGGLSALFLLSKKC---DPMSAFEVPQSALACEQPAPLPTHARIVGLALFEGIPRSPDITFAIPPDVFVSVMTTQFYVNNTASILQSNGNLVDALISDANHFGPNDFTNASMSLPCAFPRP-PEASFRTDYRTQRTVISTIATITSRSYRVFFKGQDKLMLTRLPVVNPRVQIL 336
            M + +AFF+++L LTT +   + + T ++VPHQL+DL+ N  R TTV FTLYA+RPVR+SPLV ILPG L+    Y  LS   AYRGF+VA+P YDQR  P  S    L  H+++T++  PPCP NGQF+SAALVS+ L +V SR      WLLRKILVDR ++FGHSFGG +AL L++  C   DP+    +   A  CE    LP  AR+VG+ +FEG    P   +AIP D F  +  +++++     +LQ +GNLVD   S+ANHF PNDFTN+SM   C+ PRP PE  FRTD++TQRTVIS++A++  RSYRVFF+ +D ++LT L V NPRV+ L
Sbjct:    1 MKIALAFFLLLLHLTTASHRKKFVKTIIRVPHQLYDLSTNTSRPTTVAFTLYAKRPVRRSPLVFILPGGLVLPGYYTQLSHELAYRGFIVAIPDYDQRPIPPGSPPG-LAEHVAYTTTFDPPCPENGQFTSAALVSSLLEHVLSRPQPRPRWLLRKILVDRIILFGHSFGGTTALQLVAGTCAITDPLGRSPI---AFLCEDFRALPPEARVVGVMMFEGGLYLP-FKYAIPHDQFFILGASKYFMEQYEPVLQPSGNLVDVRFSEANHFAPNDFTNSSMVTRCSIPRPLPEGLFRTDFQTQRTVISSVASVLCRSYRVFFEKRDPVLLTGLSVTNPRVETL 337
The following BLAST results are available for this feature:
BLAST of Ggra7009.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IVP82.540e-10250.58Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR029058Alpha/Beta hydrolase foldGENE3D3.40.50.1820alpha/beta hydrolasecoord: 27..289
e-value: 8.6E-15
score: 56.8
IPR029058Alpha/Beta hydrolase foldSUPERFAMILY53474alpha/beta-Hydrolasescoord: 35..216
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..4
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 5..15
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 21..339
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..20
NoneNo IPR availableTMHMMTMhelixcoord: 5..24

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000211_piloncontigtig00000211_pilon:186556..187792 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra7009.t1Ggra7009.t1Gracilaria gracilis GNS1m malemRNAtig00000211_pilon 186556..187792 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra7009.t1 ID=Ggra7009.t1|Name=Ggra7009.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=340bp
MSVKIAFFVIILSLTTFTCGTRIITTTLQVPHQLWDLTDNNMRTTTVPFT
LYARRPVRKSPLVIILPGALLQASDYQDLSSAFAYRGFVVAVPQYDQREQ
PFSSRSAILRAHLSFTSSLKPPCPANGQFSSAALVSTFLSYVSRSSHSHW
LLRKILVDRTVIFGHSFGGLSALFLLSKKCDPMSAFEVPQSALACEQPAP
LPTHARIVGLALFEGIPRSPDITFAIPPDVFVSVMTTQFYVNNTASILQS
NGNLVDALISDANHFGPNDFTNASMSLPCAFPRPPEASFRTDYRTQRTVI
STIATITSRSYRVFFKGQDKLMLTRLPVVNPRVQILNVR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029058AB_hydrolase