Ggra612.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra612.t1
Unique NameGgra612.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length188
Homology
BLAST of Ggra612.t1 vs. uniprot
Match: A0A2V3IVN9 (Putative peroxiredoxin bcp n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IVN9_9FLOR)

HSP 1 Score: 253 bits (646), Expect = 7.770e-84
Identity = 122/152 (80.26%), Postives = 133/152 (87.50%), Query Frame = 0
Query:   36 MSLAVGSSIPQFRLPTDGGKMLSNDDLNKGLGIIYFYPRDATPGCTCEAQDFRNFKPDLEALSAFVVGVSKDSVESHDAFVSDLDLNFPLISDDGTLCEAFGVWKLRKRGDVEKMGIERSTFVLKDGVIEKEWRGMKATGHAADVIQALRSM 187
            MSLAVGS IP F LPTDG K LS  D++KG  IIYFYP+DATPGCTCEAQDFR+FKP LE + A VVGVSKDSVESHDAFV+DL LNFPLISDDGTLCEAFGVWKLRKRGD E MGIERSTF+LKDGVI KEWRGMKATGHAA V+ AL+++
Sbjct:    1 MSLAVGSPIPSFTLPTDGAKTLSTTDISKGPAIIYFYPKDATPGCTCEAQDFRDFKPQLEQMGATVVGVSKDSVESHDAFVNDLSLNFPLISDDGTLCEAFGVWKLRKRGDREFMGIERSTFLLKDGVIVKEWRGMKATGHAAQVMDALKAL 152          
BLAST of Ggra612.t1 vs. uniprot
Match: R7QGR8 (Thioredoxin domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QGR8_CHOCR)

HSP 1 Score: 203 bits (516), Expect = 5.050e-64
Identity = 101/154 (65.58%), Postives = 119/154 (77.27%), Query Frame = 0
Query:   36 MSLAVGSSIPQFRLPTDGGKMLSNDDLNKGLG--IIYFYPRDATPGCTCEAQDFRNFKPDLEALSAFVVGVSKDSVESHDAFVSDLDLNFPLISDDGTLCEAFGVWKLRKRGDVEKMGIERSTFVLKDGVIEKEWRGMKATGHAADVIQALRSM 187
            MS+ VGS    F LPT GG  LS  DL       IIYFYPRDATPGCT EA+DFR+  P LE L+A VVGVS+DSVESHDAFV DLDLNFPLI+DDGTL E +GVWKLRK GD E M +ERSTF+L+ G + KEWRG+K+TGHAA V+++L+S+
Sbjct:    1 MSVTVGSPAVDFSLPTSGGGTLSAADLQAKAEFVIIYFYPRDATPGCTTEAKDFRDLAPQLEQLNATVVGVSRDSVESHDAFVKDLDLNFPLITDDGTLTEGYGVWKLRKLGDKEMMIVERSTFILRGGKVVKEWRGVKSTGHAAAVVESLKSL 154          
BLAST of Ggra612.t1 vs. uniprot
Match: peroxiredoxin Bcp-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D2C89 (peroxiredoxin Bcp-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D2C89)

HSP 1 Score: 157 bits (397), Expect = 1.930e-45
Identity = 86/169 (50.89%), Postives = 113/169 (66.86%), Query Frame = 0
Query:   23 PVRRVAAGRTLPSMSLAVGS---SIPQFRLPTDGGKMLSNDDLNKGLGIIYFYPRDATPGCTCEAQDFRNFKPDLEALSAFVVGVSKDSVESHDAFVSDLDLNFPLISD-DGTLCEAFGVWKLRKRGDVEKMGIERSTFVLKDGVIEKEWRGMKATGHAADVIQALRSM 187
            P+RR A G    S+ + VG    ++    LPT GG  LS  DL + L +IYFYP+D+T GCTCEA DF     DL  L A V+GVS+DSVESHD FV ++ + FPL++D  G +C+ +GV+KLR+    E MGIERSTF++KDG I K WRG+KA GHA +V+ AL  +
Sbjct:   29 PLRRRANG----SLRMEVGEGDVALSFGALPTSGGGTLSAADLGR-LYVIYFYPKDSTSGCTCEATDFTARMDDLAKLGAKVLGVSRDSVESHDKFVDEVGIGFPLLADVTGEVCDGYGVYKLRQMFGKEFMGIERSTFIVKDGKIVKAWRGVKAAGHADEVVAALEQL 192          
BLAST of Ggra612.t1 vs. uniprot
Match: A0A367WVB6 (Thioredoxin peroxidase n=5 Tax=Thalassospira TaxID=168934 RepID=A0A367WVB6_9PROT)

HSP 1 Score: 155 bits (392), Expect = 3.360e-45
Identity = 77/154 (50.00%), Postives = 104/154 (67.53%), Query Frame = 0
Query:   36 MSLAVGSSIPQFRLPTDGGKMLSNDDLNKGLGIIYFYPRDATPGCTCEAQDFRNFKPDLEALSAFVVGVSKDSVESHDAFVSDLDLNFPLISDD-GTLCEAFGVWKLRKRGDVEKMGIERSTFVLK-DGVIEKEWRGMKATGHAADVIQALRSM 187
            M+L VG   P F LPTDG   +   DL     +IYFYP+D TPGCT E+ +FR+ +PD  A++A ++G+SKDSV  HD F +  DLNF L SD+ GT+CE FGVW+ +     + MGIERSTFV+  DGVI   WR +K  GH A+V++A+R++
Sbjct:    1 MTLNVGDKAPDFELPTDGDNSVKLSDLAGKPVVIYFYPKDMTPGCTTESCEFRDAEPDFSAVNAQIIGISKDSVSRHDKFKAKHDLNFILASDENGTVCEEFGVWQEKSMYGKKFMGIERSTFVIDGDGVIRNAWRKVKVKGHVAEVLEAVRAL 154          
BLAST of Ggra612.t1 vs. uniprot
Match: thioredoxin-dependent thiol peroxidase n=1 Tax=Kiloniella laminariae TaxID=454162 RepID=UPI00036851DC (thioredoxin-dependent thiol peroxidase n=1 Tax=Kiloniella laminariae TaxID=454162 RepID=UPI00036851DC)

HSP 1 Score: 154 bits (389), Expect = 9.560e-45
Identity = 75/154 (48.70%), Postives = 104/154 (67.53%), Query Frame = 0
Query:   36 MSLAVGSSIPQFRLPTDGGKMLSNDDLNKGLGIIYFYPRDATPGCTCEAQDFRNFKPDLEALSAFVVGVSKDSVESHDAFVSDLDLNFPLISDD-GTLCEAFGVWKLRKRGDVEKMGIERSTFVLK-DGVIEKEWRGMKATGHAADVIQALRSM 187
            MSL  G   P F  P +GG  LS   L   + ++YFYP+D+TPGCT +A DFR+  PD   L A V+GVSKDSV+ HD F++  +LNFPL+SD+ G +CEA+GVW L+K    E MGIER+TF++  +GVI + W  +K +GH  +V +A+ S+
Sbjct:    1 MSLETGDKAPDFTAPLNGGDELSLSSLRGQIVVLYFYPKDSTPGCTTQACDFRDALPDFSKLDARVIGVSKDSVKRHDNFIAKNELNFPLVSDESGAICEAYGVWTLKKLYGKEYMGIERATFLIDAEGVIRRIWHKVKVSGHVKEVREAVASL 154          
BLAST of Ggra612.t1 vs. uniprot
Match: thioredoxin-dependent thiol peroxidase n=1 Tax=Thalassospira sp. MA62 TaxID=2896364 RepID=UPI001E3C4227 (thioredoxin-dependent thiol peroxidase n=1 Tax=Thalassospira sp. MA62 TaxID=2896364 RepID=UPI001E3C4227)

HSP 1 Score: 153 bits (387), Expect = 1.920e-44
Identity = 77/154 (50.00%), Postives = 103/154 (66.88%), Query Frame = 0
Query:   36 MSLAVGSSIPQFRLPTDGGKMLSNDDLNKGLGIIYFYPRDATPGCTCEAQDFRNFKPDLEALSAFVVGVSKDSVESHDAFVSDLDLNFPLISDD-GTLCEAFGVWKLRKRGDVEKMGIERSTFVL-KDGVIEKEWRGMKATGHAADVIQALRSM 187
            M+L VG   P F LPTDG   +   DL     +IYFYP+D TPGCT E+ +FR+ +PD  +++A ++G+SKDSV  HD F +  DLNF L SD+ GT CE +GVWK +     + MGIERSTFV+ KDGVI   WR +K  GH A+V+ A++S+
Sbjct:    1 MTLDVGDKAPDFELPTDGEGTIKLSDLAGKPVVIYFYPKDMTPGCTTESCEFRDAEPDFSSVNAQIIGISKDSVTRHDKFKAKHDLNFILASDENGTTCEEYGVWKEKNMYGKKFMGIERSTFVIDKDGVIRNIWRKVKVKGHVAEVLDAVKSL 154          
BLAST of Ggra612.t1 vs. uniprot
Match: K9GNC2 (Thioredoxin peroxidase n=1 Tax=Caenispirillum salinarum AK4 TaxID=1238182 RepID=K9GNC2_9PROT)

HSP 1 Score: 149 bits (377), Expect = 7.090e-43
Identity = 74/154 (48.05%), Postives = 101/154 (65.58%), Query Frame = 0
Query:   36 MSLAVGSSIPQFRLPTDGGKMLSNDDLNKGLGIIYFYPRDATPGCTCEAQDFRNFKPDLEALSAFVVGVSKDSVESHDAFVSDLDLNFPLISD-DGTLCEAFGVWKLRKRGDVEKMGIERSTFVLK-DGVIEKEWRGMKATGHAADVIQALRSM 187
            MSL+VG + P F LPTDGG  +S   L     ++YFYP+DATPGCT EA DFR+ +PD   + A ++GVSKDSV+ HD+F +   L FPL SD D  +CE +GVWK +        GIER+TF++  DG I + W  +K  GHAA+V+ A +++
Sbjct:    1 MSLSVGDAAPDFTLPTDGGGSVSLSALKGKPVVLYFYPKDATPGCTTEACDFRDLEPDFSGVDAVIIGVSKDSVKKHDSFKAKQGLTFPLASDADSDVCERYGVWKEKSMYGKTFWGIERTTFLIAPDGTIAQVWPKVKVKGHAAEVLDATKAL 154          
BLAST of Ggra612.t1 vs. uniprot
Match: A0A286G179 (Thioredoxin peroxidase n=1 Tax=Caenispirillum bisanense TaxID=414052 RepID=A0A286G179_9PROT)

HSP 1 Score: 149 bits (375), Expect = 1.260e-42
Identity = 71/154 (46.10%), Postives = 103/154 (66.88%), Query Frame = 0
Query:   36 MSLAVGSSIPQFRLPTDGGKMLSNDDLNKGLGIIYFYPRDATPGCTCEAQDFRNFKPDLEALSAFVVGVSKDSVESHDAFVSDLDLNFPLISD-DGTLCEAFGVWKLRKRGDVEKMGIERSTFVL-KDGVIEKEWRGMKATGHAADVIQALRSM 187
            M+L+VG + P F LPTDGG  ++  DL     ++YFYP+D TPGCT EA DFR+  PD   + A V+G+SKD+V  HD F +   L FPL SD +G +CE +GVWK +       +GIERSTF++ +DG + + W  +K  GHAA+V++A++++
Sbjct:    1 MTLSVGDTAPDFTLPTDGGGSVTLSDLRGKPVVLYFYPKDDTPGCTTEACDFRDAMPDFSGIDAVVIGISKDTVAKHDKFKAKHGLTFPLASDAEGDVCERYGVWKEKSMYGKTFLGIERSTFLVGRDGTLARVWPKVKVKGHAAEVLEAVKAL 154          
BLAST of Ggra612.t1 vs. uniprot
Match: A0A1X6NLH9 (Thioredoxin domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NLH9_PORUM)

HSP 1 Score: 150 bits (378), Expect = 1.810e-42
Identity = 78/166 (46.99%), Postives = 101/166 (60.84%), Query Frame = 0
Query:   26 RVAAGRTLPSMSLAVGSSIPQFRLPTDGGKMLSNDDLNKGLGIIYFYPRDATPGCTCEAQDFRNFKPDLEALSAFVVGVSKDSVESHDAFVSDLDLNFPLISDDGT---LCEAFGVWKLRKRGDVEKMGIERSTFVLKD-GVIEKEWRGMKATGHAADVIQALRSM 187
            R  A R LP+M++ VG   P F LPTDGG  +S  DL     ++YFYPRD TPGCT EAQ FR+    L A  A V+GVS DS  SHDAF +   LNFPL+SD      +  A+GVW+LRK+   E MG+ RSTFV+   G + +EW  +   GH  +V+  + S+
Sbjct:   36 RARAARLLPTMAVTVGEPAPAFTLPTDGGGSMSLSDLAGKKVVLYFYPRDDTPGCTVEAQGFRDAADRLAAAGAVVIGVSPDSTASHDAFKAKYGLNFPLVSDVDDAKPMLSAYGVWQLRKKFGKEFMGVSRSTFVIDGAGAVAREWLSVVVDGHVEEVVSYVESL 201          
BLAST of Ggra612.t1 vs. uniprot
Match: A0A853KUV6 (Thioredoxin peroxidase n=25 Tax=Thalassospira TaxID=168934 RepID=A0A853KUV6_9PROT)

HSP 1 Score: 148 bits (373), Expect = 2.530e-42
Identity = 73/154 (47.40%), Postives = 101/154 (65.58%), Query Frame = 0
Query:   36 MSLAVGSSIPQFRLPTDGGKMLSNDDLNKGLGIIYFYPRDATPGCTCEAQDFRNFKPDLEALSAFVVGVSKDSVESHDAFVSDLDLNFPLISDD-GTLCEAFGVWKLRKRGDVEKMGIERSTFVLKD-GVIEKEWRGMKATGHAADVIQALRSM 187
            M++ VG   P F LPTDG   +   DL     +IYFYP+D TPGCT E+ +FR+ +PD  A+ A ++G+SKDS + HD F +  DLNF L SD+ GT CE +GVWK +     + MGIERSTFV+   GVI   WR +K  GH A+V++A++++
Sbjct:    1 MTVDVGDKAPDFELPTDGNGRVKLSDLAGKPVVIYFYPKDMTPGCTTESCEFRDAEPDFSAVDAQIIGISKDSADRHDKFKAKHDLNFILASDENGTTCEDYGVWKEKSMYGKKFMGIERSTFVIDGKGVIRNAWRKVKVKGHVAEVLEAVKAL 154          
The following BLAST results are available for this feature:
BLAST of Ggra612.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IVN97.770e-8480.26Putative peroxiredoxin bcp n=1 Tax=Gracilariopsis ... [more]
R7QGR85.050e-6465.58Thioredoxin domain-containing protein n=1 Tax=Chon... [more]
peroxiredoxin Bcp-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D2C891.930e-4550.89peroxiredoxin Bcp-like n=1 Tax=Mercenaria mercenar... [more]
A0A367WVB63.360e-4550.00Thioredoxin peroxidase n=5 Tax=Thalassospira TaxID... [more]
thioredoxin-dependent thiol peroxidase n=1 Tax=Kiloniella laminariae TaxID=454162 RepID=UPI00036851DC9.560e-4548.70thioredoxin-dependent thiol peroxidase n=1 Tax=Kil... [more]
thioredoxin-dependent thiol peroxidase n=1 Tax=Thalassospira sp. MA62 TaxID=2896364 RepID=UPI001E3C42271.920e-4450.00thioredoxin-dependent thiol peroxidase n=1 Tax=Tha... [more]
K9GNC27.090e-4348.05Thioredoxin peroxidase n=1 Tax=Caenispirillum sali... [more]
A0A286G1791.260e-4246.10Thioredoxin peroxidase n=1 Tax=Caenispirillum bisa... [more]
A0A1X6NLH91.810e-4246.99Thioredoxin domain-containing protein n=1 Tax=Porp... [more]
A0A853KUV62.530e-4247.40Thioredoxin peroxidase n=25 Tax=Thalassospira TaxI... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.30.10Glutaredoxincoord: 36..186
e-value: 4.7E-33
score: 115.7
NoneNo IPR availablePANTHERPTHR42852:SF10BACTERIOFERRITIN COMIGRATORY PROTEINcoord: 31..186
NoneNo IPR availablePANTHERPTHR42852THIOL:DISULFIDE INTERCHANGE PROTEIN DSBEcoord: 31..186
NoneNo IPR availableCDDcd03017PRX_BCPcoord: 44..182
e-value: 3.76512E-59
score: 179.666
IPR000866Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidantPFAMPF00578AhpC-TSAcoord: 40..165
e-value: 3.4E-25
score: 88.3
IPR013766Thioredoxin domainPROSITEPS51352THIOREDOXIN_2coord: 38..187
score: 12.104715
IPR036249Thioredoxin-like superfamilySUPERFAMILY52833Thioredoxin-likecoord: 38..187

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000203_piloncontigtig00000203_pilon:144984..145547 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra612.t1Ggra612.t1Gracilaria gracilis GNS1m malemRNAtig00000203_pilon 144984..145547 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra612.t1 ID=Ggra612.t1|Name=Ggra612.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=188bp
MAFVPSLHAPFVRSHYAQISRLPVRRVAAGRTLPSMSLAVGSSIPQFRLP
TDGGKMLSNDDLNKGLGIIYFYPRDATPGCTCEAQDFRNFKPDLEALSAF
VVGVSKDSVESHDAFVSDLDLNFPLISDDGTLCEAFGVWKLRKRGDVEKM
GIERSTFVLKDGVIEKEWRGMKATGHAADVIQALRSM*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000866AhpC/TSA
IPR013766Thioredoxin_domain
IPR036249Thioredoxin-like_sf