Ggra10802.t1 (polypeptide) Gracilaria gracilis GNS1m male
|
Overview
Homology
BLAST of Ggra10802.t1 vs. uniprot
Match: R7Q5C2 (VWFA domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q5C2_CHOCR) HSP 1 Score: 139 bits (350), Expect = 1.390e-36 Identity = 78/206 (37.86%), Postives = 125/206 (60.68%), Query Frame = 0
Query: 49 LVAENSLAASIGVPSLLQLQHKLLDNDGCPARMCFAMDGSESVSVQEYEVQKELVMLIATMVSLHNKAEFSAVQYGVPSINVADTTKDISQFLHDVKNSTLGNSKFSFLTAGLGACILRVQAGDSLYGN-ILVLGEGHENFARNFLPSVTSKLRTEQVFALGIGHDIDDEIFREITRGNSSNIFRVDSYDVVKDVVDVVVSSICSI 253
+V +N +AAS+G ++ LQ ++ + C +CFA+DGS S+S +EY+VQK+LV LIA + + N A FSAVQYG+ + ++ +T D F+ V NS L + +FLTAGLG CI +V G ++VLG+G +N+ + L V + +FA+GIG+ +D + EIT G ++++ +Y V VV +V ++CS+
Sbjct: 50 IVQKNPVAASLGAKTIDSLQTEVCRDGSCDISLCFALDGSGSISAEEYQVQKDLVKLIAILAAPAN-ATFSAVQYGLANEFISVSTSDPFAFMKYVDNSVLLRAPRTFLTAGLGFCISQVNENPKAGGKKVVVLGDGRDNYMESSLALVLKSAESVDIFAVGIGNSLDTQKLLEITGGQKNHVYTASNYADVGQVVVDLVRALCSV 254
BLAST of Ggra10802.t1 vs. uniprot
Match: R7Q3A9 (VWFA domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q3A9_CHOCR) HSP 1 Score: 109 bits (272), Expect = 3.140e-25 Identity = 70/204 (34.31%), Postives = 115/204 (56.37%), Query Frame = 0
Query: 49 LVAENSLAASIGVPSLLQLQHKLLDNDGCPARMCFAMDGSESVSVQEYEVQKELVMLIATMVSLHNKAEFSAVQYGVPSINVADTTKDISQFLHDVKNSTLGNSKFSFLTAGLGACILRVQAGDSLYGN-ILVLGEGHENFARNFLPSVTSKLRTEQVFALGIGHDIDDEIFREITRGNSSNIFRVDSYDVVKDVVDVVVSSIC 251
L+ N LA S+GV +++L ++ C R+CFA+DGS S+S +++VQ++LV L+A+ V+ A FSAVQYG+ + ++ T + +F V +S + +F+ +GLG CI ++ G IL+LG+G NF LP V S L Q+ A+GIG + +IT G+ S + V+ Y ++ +V +V +C
Sbjct: 37 LLRGNRLAQSVGVNGIVRLFKEVNRGRRCNMRLCFALDGSGSISPVQFKVQQDLVKLLAS-VAREGGATFSAVQYGLSNTAISTPTGNAPKFRRAVDDSIFQRAPRTFIGSGLGFCISNLKTEPRGRGRRILLLGDGRSNFFTLALPLVLSTLNDIQISAVGIGFPRNSRTLLDIT-GSRSRLCAVNRYSDIRRIVFKLVRGLC 238
BLAST of Ggra10802.t1 vs. uniprot
Match: A0A2V3IQR5 (Collagen alpha-5(VI) chain n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IQR5_9FLOR) HSP 1 Score: 95.1 bits (235), Expect = 7.340e-20 Identity = 62/217 (28.57%), Postives = 106/217 (48.85%), Query Frame = 0
Query: 45 RTDELVAENSLAASIGVPSLLQLQHKLLDNDGCPARMCFAMDGSESVSVQEYEVQKELVMLIATMVSLHNKAEFSAVQYGVPSINVADTTKDISQFLHDVKNSTLGNSKFSFLTAGLGACILRVQAGDSLYGNILVLGEGHENFARNFLP----SVTSKLRTEQ---VFALGIGHDIDDEIFREITRGNSSNIFRVDSYDVVKDVVDVVVSSICSIE 254
R DEL + L + +QL ++ + C +CFA+DGS S+ V E++++K+ L+A +V+ +A F+AVQYG+ ++ T+D FL V + N+ +F+ GL CI + +I++LG+G NF P S+ + A+G+G D DD + I G N+F V + V V+ +V +C ++
Sbjct: 27 RIDEL--DTPLTKGTANEAEVQLALQIAEKTRCDPNICFAVDGSGSMDVTEFQLEKDFTNLVAAVVAYDEQARFAAVQYGLRPKFISRLTEDADAFLEAVHYTESLNAPRTFIAPGLAGCIRQFYYLKGEPKHIVLLGDGRSNFDSKLPPLDPVSIAQAFLANPNNTISAVGVGFDADDTMLTNIA-GGEENVFNVGQWLEVTTVLAELVGEVCGLD 240
BLAST of Ggra10802.t1 vs. uniprot
Match: A0A2V3ISA4 (VWFA domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ISA4_9FLOR) HSP 1 Score: 89.7 bits (221), Expect = 7.020e-18 Identity = 55/189 (29.10%), Postives = 101/189 (53.44%), Query Frame = 0
Query: 70 KLLDNDGCPARMCFAMDGSESVSVQEYEVQKELVMLIATMVSLHNKAEFSAVQYGVPSINVADTTKDISQFLHDVKNSTLGNSKFSFLTAGLGACILRVQAGDSLYGNILVLGEGHENFARNFLP----SVTSKLRTE---QVFALGIGHDIDDEIFREITRGNSSNIFRVDSYDVVKDVVDVVVSSIC 251
++++ GC +CFA+DGS S++ E+++Q + V LI +VSL ++ +SA+QYG+ ++ T+D + FL V+ + S +F+ G+G C+ + + I++LG+G F P S+ ++ E + A+G+ D E+ EIT G+ +F V + V DV+ +V +C
Sbjct: 47 EIVEETGCEPNLCFAIDGSSSITDDEFQLQLDFVALITGLVSLDEQSGYSAIQYGLRPKFMSRFTQDAAAFLLKVEGTRQLRSVRTFIAPGIGGCMRQFRRVRGQANKIILLGDGRSTFDSRDPPLDPPSIAAQFLAEPNNSICAVGVSFDTT-ELLEEIT-GDPDRVFSVADWMSVVDVLADLVEQVC 233
BLAST of Ggra10802.t1 vs. uniprot
Match: A0A2V3ID60 (Cartilage matrix protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ID60_9FLOR) HSP 1 Score: 69.7 bits (169), Expect = 1.170e-10 Identity = 51/203 (25.12%), Postives = 98/203 (48.28%), Query Frame = 0
Query: 49 LVAENSLAASIGVPSLLQLQHKLLDNDGCPARMCFAMDGSESVSVQEYEVQKELVMLIATMVSLH-NKAEFSAVQYGVPSINVADTTKDISQFLHDVKNSTLGNSKFSFLTAGLGACILRVQAGDSLYGNILVLGEGHENFARNFLPSVTSKLR----TEQVFALGIGHDIDDEIFREITRGNSSNIFRVDSY-DVVKDVVDV 245
LV +++ + LQ ++++ +GC +CFA+DGS SV+ +YE+QK+ V L++ ++ + FSAVQYG ++ T+ I F V S + + S + G+ C ++ I+V G+G E ++ S+ + + ++ +G+G + + + I +F +D Y D + VVD+
Sbjct: 16 LVTAIPFESNMNMRMRLQGVRRMVERNGCNLNVCFALDGSASVTPLDYEMQKDFVQLMSAVLDFEVENSSFSAVQYGDQVSPISPLTQSIDDFNLKVHASNISAFQGSSIGKGITYCSNQLLELADNPVKIIVFGDGRET-SKTDAVSIAASFKDFHPNGRLSTVGVGFP-NTVLLKTIAEAGGGRLFEIDEYIDALDLVVDL 216 The following BLAST results are available for this feature:
BLAST of Ggra10802.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 5
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Ggra10802.t1 ID=Ggra10802.t1|Name=Ggra10802.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=258bpback to top |