Ggra9974.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra9974.t1
Unique NameGgra9974.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length653
Homology
BLAST of Ggra9974.t1 vs. uniprot
Match: A0A2V3J5J9 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J5J9_9FLOR)

HSP 1 Score: 872 bits (2252), Expect = 1.990e-312
Identity = 450/668 (67.37%), Postives = 540/668 (80.84%), Query Frame = 0
Query:    1 MGTFPPSAASFLSKLRFCTTATRSTNERVLPLPDATPYPDRL-----QSTPRSPSPPPFLRDSTQQAST-------QAPPSNLKTS--QSLPSRPHHAKHPNKPENAAALKAAFTEKVRDLEAQLPNRSHRFKYNP-GLAQRLLVSARLKSKLETSRIVRLPYSKSYKYTLVVALVLTGAFLTPQMLPKWIGFEWASPEDLCQSPDQKLVHIRQQLVNLTSLRESKHFLEQQQYTLHCMNRSSADFYHGANGKPARFLWPHECDSDKAKVALSETTCVEQKANVCKRVNFFARIFASISGDCVQKVGPDLCVESTNAERSESLYQLEKERNAMQQNLSEIDTEPIVSTAESKISEVVSRLMTQIDLAADCFIVYSVIAVMVGIPLVISKREKTSRVMTATLGLTKMTFVMVFIILLSLYDSFFLVFQDTDFPRLFGNFLNDPCYVNPEFSSKRVGMIVDMCNNISYIEQQSDYVLQRMDTVYYDTRLFGHCKDEKRNLSIHPKLNDMDNIRKLYREGNISNPGVCNATELDERTSIAPENERASKWKALLGSGVVAQLALKIIFTSWIIHLLAFMEPMVLHNGKVELWGMKPKMLLTGEDERAIRRFARDKHLLPLIVFSVLLVVEVVLFGFSIYTTISGAGEIVAQN-ATVPLTQAAEFRCPSSLGM 652
            MG  PP  +  +S+        R  N R+L LP+A P+PDR+      S   SPS    +R S Q           +AP S+  +   + LP   +     N       ++    E  RD+EAQ P +SHRFKY+P G  QRLLVS RLK+KLE+S+I+R+PY++S+KYTLV+ L+ TGAFLTPQ+LPKWIGFEWASPEDLCQSPD KL  I +Q++N+T +R++KHF+EQQ+YTL CMNRS+ADFYHG NGKP RFLWP ECDS+KA++AL+ETTCVEQK N+CKRVNFFAR+F S+SG+CVQK GPDLCVESTNAERSESLYQLEKERNA +QN ++I TEPIV+TAESKIS++++RLM Q+DLAADCFIVYSV++V+VGIPLVISKREKTSRV+ ATLGLTKMTFVMVFIILLSLYDS FL+F+DTDFPR+F NFLNDPCYVNP+FS++RVGMIVD+CNNISYI+QQSDY+LQRMD VYYDTRLFGHCKD+ R L++HPKL  MD IRK+YREGNISNPG+CNATELD RTS+APENER SKWKAL+GSGVVAQL LKI+FT WIIH L+F+EPMVLH+GKVELWG+K +  L+ EDE+AIRRFARDKHLLPLI FS LL +E+ LFG+SIYTTISGAGEI   N  T+PLT+  E RCPS LG+
Sbjct:    1 MGATPPENSPKISRFL---PWRRVPNRRILSLPEAIPFPDRIAPNVGSSNASSPS----VRFSNQSDGPRGRHRMEEAPFSDAISQPFRRLPLLQNRGSESNFDHQKGIVEEPDNE--RDVEAQHPPQSHRFKYDPPGWGQRLLVSTRLKNKLESSKIIRVPYARSHKYTLVLTLLFTGAFLTPQLLPKWIGFEWASPEDLCQSPDDKLNEIHRQVLNMTLIRDAKHFIEQQEYTLDCMNRSAADFYHGKNGKPPRFLWPKECDSEKARMALNETTCVEQKTNICKRVNFFARLFVSVSGNCVQKTGPDLCVESTNAERSESLYQLEKERNAFEQNFTDIKTEPIVATAESKISQIINRLMLQVDLAADCFIVYSVVSVLVGIPLVISKREKTSRVVGATLGLTKMTFVMVFIILLSLYDSAFLIFRDTDFPRMFQNFLNDPCYVNPDFSARRVGMIVDVCNNISYIDQQSDYILQRMDRVYYDTRLFGHCKDDDRELAVHPKLKAMDKIRKMYREGNISNPGICNATELDTRTSVAPENERTSKWKALMGSGVVAQLLLKIVFTGWIIHFLSFIEPMVLHSGKVELWGVKSRTSLSEEDEKAIRRFARDKHLLPLIFFSTLLAIEIALFGYSIYTTISGAGEIQTHNNKTMPLTKPPELRCPSVLGL 659          
BLAST of Ggra9974.t1 vs. uniprot
Match: R7QPE7 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QPE7_CHOCR)

HSP 1 Score: 386 bits (992), Expect = 3.990e-125
Identity = 201/439 (45.79%), Postives = 287/439 (65.38%), Query Frame = 0
Query:  224 MNRSSADFYHGANGKPARFLWPHECDSDKAKVALSETTCVEQKA-NVCKRVNFFARIFASISGDCVQKVGPDLCVESTNAERSESLYQLEKERNAMQQNLSEIDTEPIVSTAESKISEVVSRLMTQIDLAADCFIVYSVIAVMVGIPLVISKREKTSRVMTATLGLTKMTFVMVFIILLSLYDSFFLVFQDTDFPRLFGNFLNDPCYVNPEFSSKRVGMIVDMCNNISYIEQQSDYVLQRMDTVYYDTRLFGHCKDEKRNLSIHPKLNDMDNIRKLYREGNISNPGVCNATELDERTSIAPENERASKWKALLGSGVVAQLALKIIFTSWIIHLLAFMEPMVLHNGKVELW--GMKPKMLLTGEDERA------------IRRFARDKHLLPLIVFSVLLVVEVVLFGFSIYTTISGAGEIVAQNATVPLTQAAEFRCP 647
            MN S+  FY      P RF WPHEC  +KA  +L +  CV     +VC  +    +IFAS++  C     P  CV++ ++ER+E L +LE+E NA   N +  +T+PIV TA  K++E+++R++ Q+D+A+D +I YS++A+++G+PL+I KREK SR++ AT G+TK+TF++V ++ LS+Y+SFFL+ ++TDF R+F NF NDPCYV+ +FS +RV +I+  CNN++ +   S Y LQ MD VY+ TR F  CKD  R  S HP+  DMD++R  YR+G+   PG CNAT LD  TS APE+   SK +ALLGSGVVAQL LK I TSW++H++A+ EPM++HNGKVE+W    KP     GE++ A              RFARDKHLLP I  S+L+V EVVL  +S+  T SG  +++       ++ A  F CP
Sbjct:    1 MNSSADTFYQA----PDRFQWPHECTPEKASDSLEDEVCVGPTTKSVCDDIGGIRKIFASLAQTCKSITVPKKCVQTVDSERTEELLRLEREENAQVFNKTATETQPIVQTANDKVTEILNRILVQVDIASDIYIAYSIVALIIGMPLIIYKREKGSRILGATFGMTKLTFIIVVVVFLSMYESFFLIMKETDFVRIFRNFRNDPCYVDGDFSRRRVNLIIHTCNNVTQLATNSTYTLQDMDGVYFTTRRFALCKDATREPSAHPRQGDMDSLRHSYRDGDKKFPGSCNATYLDSETSTAPEDPGFSKLQALLGSGVVAQLFLKFIVTSWLVHIMAYCEPMIMHNGKVEIWDTNRKPTEEKGGEEKDAQEMPLNEREAASATRFARDKHLLPAIFMSILMVGEVVLIAYSMVVTHSGRSDMLTTAGNTGMSTA--FTCP 433          
BLAST of Ggra9974.t1 vs. uniprot
Match: D7FZW1 (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FZW1_ECTSI)

HSP 1 Score: 87.4 bits (215), Expect = 3.140e-14
Identity = 123/573 (21.47%), Postives = 236/573 (41.19%), Query Frame = 0
Query:   90 PENAAALKAAFTEKVRDLEAQLPNRSHRFKYNPGLAQRLLVSARLKSKLETSRIVRLPYS-------KSYKYTLVVALVLTGAFLTPQMLPKWIGFEWASPEDLCQSPDQKLVHIRQQLVNLTSLRESKHFLEQQQYTLHCMNRSSADFY--HGANGKPARFLWPHECDSDKAKVALSETTCVEQKANVCKRVNFFARIFASISGDCVQKVGPDLCVEST----NAERSESLYQLEKERNAMQ---QNLSEIDTEPIVSTAESKISEV---VSRLMTQIDLAADCFIVYSVIAVMVGIPLVISKREKTSRVMTATLGLTKMTFVMVFIILLSLYDSFFLVFQDTDFPRLFGNFLNDPCYVNPEFSSKRVGMIVDMCNNISYIEQQSDYVLQRMDTVYYDTRLFGHCKDEKRNLSIHPKLNDMDNIRKLYREGNISNP----GVCNATELDERTSIAPENERASKWKALLGSGVVAQLALKIIFTSWIIHLLAFMEPMVLHNGKVELWGMKPKMLLTGEDE---RAIRRFARDKHLLPLIVFSVLLVVEVVLFGFSIYTTISGAGEIVAQNATV 636
            P + A  +A+ + +VR+ +A L    H                 LKS    + +V+  Y        + Y  T V+A++L    +T   L   +   +  P DLC++ D  LV   + + N+T+   ++                +A+ Y   G N     F WP   D ++ +    ET   E   + C+ V       A   GD V   G   CVE+     + E +E L + +  + A+     N++  D E   + A+S + +    +S L+ +I+ A+  +++Y V  V+V  P ++   +   R+      + K  ++ + +++   ++ F  +   + +  ++ NFL DPC+ +PEF      +I + C  I      +  +  +    Y   R +G  +   + +S      +       Y + ++  P    G C ++ L   ++I P +   + W     SG +  L L+I    W I   + + P+ +H G+V    M P       D    R +R FAR + +LP +  ++LL+  ++  G S  ++  G G  V   + +
Sbjct:    2 PRSRARSRASSSREVREDKAALLGLLH-----------------LKSTPRKAEVVKWGYDCSTGSGMRDYCATGVLAVLLVITAVTVSGLTSAVQLIYVQP-DLCETRDSSLVANMELMRNITNYYNARATASLAVNITATAYFKAAETYTGEGLNALGLAFEWPSPYDLNEEQRQELETEAREG-GDDCEPVEECVGGVAGFFGDIV---GETTCVETEVPCPDIESTELLVEYDASQQALDLFGNNITAYDEEYAETLAQSALDDATSAISVLVRRINFASSIYVLYLVFTVLVPPPFIVYGAKWNVRIFEVLSNVNKPMWIALIVLVWYGHELFQSIINSSLYNIIWSNFLQDPCWADPEFLVNTSMVISETCTEII----SASNLFNQAGANY---RYYGAVETTWQPIS------EGRTDGPFYGDADVDFPQEFPGNCTSSVL--LSAIQPGDGNVNWWSLFFRSGALVALLLQITLAHWFISWFSVLRPLTMHKGRV----MIPNPETNQSDPVLFREVRAFARRRAILPFVFMTLLLLFLLINLGVS--SSAEGMGRKVLIGSAI 531          
BLAST of Ggra9974.t1 vs. uniprot
Match: A0A7S3LRQ6 (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3LRQ6_9STRA)

HSP 1 Score: 79.3 bits (194), Expect = 1.160e-11
Identity = 68/272 (25.00%), Postives = 128/272 (47.06%), Query Frame = 0
Query:  329 PIVSTA---ESKISEVVSRLMTQIDLAADCFIVYSVIAVMVGIPLVISKREKTSRVMTATLGLTKMTFVMVFIILLSLYDSFFLVFQDTDFPRLFGNFLNDPCYVNPEFSSKRVGMIVDMCNNISYIEQQSDYVLQRMDTVYYDTR--LFGHCKDEKRNLSIHPKLNDMDNIRKLYREGNISNPGVCNA---TELDERTSIAPENERASKWKALLGSGVVAQLALKIIFTSWIIHLLAFMEPMVLHNGKVELWGMKPKMLLTGEDERAIRRF 592
            P VS A   ESK   ++ RLM QI+LA+D +I+YSV A+ V  P ++ +    +R+      +++  F+++F++ L  Y          +  + F N   D CY++ +F       + + C  +  +   S++ L  +D   ++    L+  C    ++    P+L D    +    +  +    +CN    + L +  ++AP     + +  LL  GV+AQL  K I  ++   +   ++P+ +HNGKVE  G +  +    E ER +R +
Sbjct:  307 PEVSEALFEESK--SLLERLMWQINLASDLYIIYSVFALFVISPFIVYQSSFKTRLKRQYFSISQGLFILLFVLFLWTYPYIQATINLENLLKYFHNINVDTCYIDGKFLRGVKNTVQEACFKLEQLN--SNFTLASLDLQDFNASIDLYDQCNSAYQDE--FPELYDKTKEKASEAQETVLLAELCNQNIISNLVDANTVAPGVTETNVFGILLKLGVLAQLFAKFILVAFAKSVYQIVDPLAVHNGKVETIGKETPVPPASEVERFLRTY 572          
The following BLAST results are available for this feature:
BLAST of Ggra9974.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A2V3J5J91.990e-31267.37Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QPE73.990e-12545.79Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
D7FZW13.140e-1421.47Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S3LRQ61.160e-1125.00Hypothetical protein n=1 Tax=Aplanochytrium stocch... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 308..328
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 22..92
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 54..81
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 412..538
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 560..597
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..350
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 351..372
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 373..392
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 621..652
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 598..620
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 393..411
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 539..559
NoneNo IPR availableTMHMMTMhelixcoord: 538..560
NoneNo IPR availableTMHMMTMhelixcoord: 386..408
NoneNo IPR availableTMHMMTMhelixcoord: 351..373
NoneNo IPR availableTMHMMTMhelixcoord: 598..620

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000213_piloncontigtig00000213_pilon:76923..78881 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra9974.t1Ggra9974.t1Gracilaria gracilis GNS1m malemRNAtig00000213_pilon 76923..78881 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra9974.t1 ID=Ggra9974.t1|Name=Ggra9974.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=653bp
MGTFPPSAASFLSKLRFCTTATRSTNERVLPLPDATPYPDRLQSTPRSPS
PPPFLRDSTQQASTQAPPSNLKTSQSLPSRPHHAKHPNKPENAAALKAAF
TEKVRDLEAQLPNRSHRFKYNPGLAQRLLVSARLKSKLETSRIVRLPYSK
SYKYTLVVALVLTGAFLTPQMLPKWIGFEWASPEDLCQSPDQKLVHIRQQ
LVNLTSLRESKHFLEQQQYTLHCMNRSSADFYHGANGKPARFLWPHECDS
DKAKVALSETTCVEQKANVCKRVNFFARIFASISGDCVQKVGPDLCVEST
NAERSESLYQLEKERNAMQQNLSEIDTEPIVSTAESKISEVVSRLMTQID
LAADCFIVYSVIAVMVGIPLVISKREKTSRVMTATLGLTKMTFVMVFIIL
LSLYDSFFLVFQDTDFPRLFGNFLNDPCYVNPEFSSKRVGMIVDMCNNIS
YIEQQSDYVLQRMDTVYYDTRLFGHCKDEKRNLSIHPKLNDMDNIRKLYR
EGNISNPGVCNATELDERTSIAPENERASKWKALLGSGVVAQLALKIIFT
SWIIHLLAFMEPMVLHNGKVELWGMKPKMLLTGEDERAIRRFARDKHLLP
LIVFSVLLVVEVVLFGFSIYTTISGAGEIVAQNATVPLTQAAEFRCPSSL
GM*
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