Ggra9974.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra9974.t1
Unique NameGgra9974.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length653
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000213_piloncontigtig00000213_pilon:76923..78881 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra9974Ggra9974Gracilaria gracilis GNS1m malegenetig00000213_pilon 76923..78881 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra9974.t1.stop1Ggra9974.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000213_pilon 76923..76925 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra9974.t1.CDS1Ggra9974.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000213_pilon 76923..78881 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra9974.t1.exon1Ggra9974.t1.exon1Gracilaria gracilis GNS1m maleexontig00000213_pilon 76923..78881 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra9974.t1.start1Ggra9974.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000213_pilon 78879..78881 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra9974.t1Ggra9974.t1Gracilaria gracilis GNS1m malepolypeptidetig00000213_pilon 76923..78881 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra9974.t1 ID=Ggra9974.t1|Name=Ggra9974.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=653bp
MGTFPPSAASFLSKLRFCTTATRSTNERVLPLPDATPYPDRLQSTPRSPS
PPPFLRDSTQQASTQAPPSNLKTSQSLPSRPHHAKHPNKPENAAALKAAF
TEKVRDLEAQLPNRSHRFKYNPGLAQRLLVSARLKSKLETSRIVRLPYSK
SYKYTLVVALVLTGAFLTPQMLPKWIGFEWASPEDLCQSPDQKLVHIRQQ
LVNLTSLRESKHFLEQQQYTLHCMNRSSADFYHGANGKPARFLWPHECDS
DKAKVALSETTCVEQKANVCKRVNFFARIFASISGDCVQKVGPDLCVEST
NAERSESLYQLEKERNAMQQNLSEIDTEPIVSTAESKISEVVSRLMTQID
LAADCFIVYSVIAVMVGIPLVISKREKTSRVMTATLGLTKMTFVMVFIIL
LSLYDSFFLVFQDTDFPRLFGNFLNDPCYVNPEFSSKRVGMIVDMCNNIS
YIEQQSDYVLQRMDTVYYDTRLFGHCKDEKRNLSIHPKLNDMDNIRKLYR
EGNISNPGVCNATELDERTSIAPENERASKWKALLGSGVVAQLALKIIFT
SWIIHLLAFMEPMVLHNGKVELWGMKPKMLLTGEDERAIRRFARDKHLLP
LIVFSVLLVVEVVLFGFSIYTTISGAGEIVAQNATVPLTQAAEFRCPSSL
GM*
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spliced messenger RNA

>Ggra9974.t1 ID=Ggra9974.t1|Name=Ggra9974.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1959bp|location=Sequence derived from alignment at tig00000213_pilon:76923..78881- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGGGCACATTTCCCCCCTCTGCTGCTTCATTTCTTTCCAAACTGCGTTT
CTGCACCACGGCCACCCGCAGCACAAACGAACGCGTCTTGCCGCTGCCGG
ATGCCACTCCATACCCAGACCGCCTTCAATCCACACCGCGCTCACCTTCT
CCACCGCCTTTTCTTCGAGACAGTACCCAACAAGCGTCCACACAAGCTCC
TCCTTCAAACCTAAAAACTTCCCAATCGCTGCCGTCCCGACCTCATCATG
CAAAACATCCGAACAAGCCCGAGAACGCTGCTGCACTCAAGGCCGCCTTC
ACTGAAAAGGTCCGCGATTTGGAGGCGCAGCTTCCAAATCGATCGCATCG
CTTCAAGTACAACCCGGGGCTTGCGCAGCGTCTTCTCGTCAGCGCCCGCC
TGAAAAGCAAGCTGGAAACAAGCAGGATCGTGCGTCTACCCTACTCGAAG
AGCTACAAGTACACGCTTGTGGTCGCGCTAGTGCTCACGGGCGCCTTTCT
CACCCCGCAGATGCTTCCAAAGTGGATTGGCTTCGAATGGGCTTCGCCGG
AGGACTTGTGTCAATCGCCCGACCAAAAGCTCGTGCACATTCGCCAACAG
CTTGTCAACCTCACCTCGCTGCGAGAGTCGAAGCACTTTTTGGAGCAACA
GCAGTACACGCTGCACTGCATGAATCGTTCGTCGGCCGATTTCTACCACG
GCGCGAATGGCAAGCCGGCGCGCTTTCTGTGGCCGCACGAGTGCGACAGC
GACAAGGCCAAGGTTGCGCTCAGCGAAACCACCTGCGTGGAGCAGAAGGC
AAACGTGTGCAAGCGCGTCAACTTCTTTGCGAGGATCTTTGCGTCGATCA
GCGGCGATTGCGTGCAAAAAGTTGGCCCCGATCTATGTGTGGAAAGCACC
AACGCCGAACGTTCCGAGTCGTTGTATCAGTTGGAGAAGGAACGAAACGC
TATGCAACAAAACCTGTCGGAAATCGATACGGAACCCATAGTTTCTACCG
CCGAGTCAAAGATTAGTGAGGTGGTAAGCAGGTTGATGACGCAGATTGAT
CTGGCGGCGGACTGCTTTATTGTGTACAGTGTAATCGCAGTGATGGTAGG
TATCCCGCTTGTGATATCGAAACGCGAAAAGACGTCACGGGTCATGACTG
CAACGCTGGGGTTAACGAAGATGACTTTTGTGATGGTGTTCATCATTCTG
CTGTCGTTGTACGACTCGTTCTTTCTGGTGTTTCAAGACACGGACTTTCC
GCGGCTGTTTGGCAACTTTTTGAACGACCCGTGCTACGTGAACCCCGAGT
TTTCGTCCAAGAGAGTGGGTATGATCGTGGACATGTGCAACAACATTTCG
TACATTGAGCAACAGAGCGACTACGTGCTACAGCGAATGGACACGGTGTA
CTACGACACAAGACTGTTTGGGCATTGCAAAGACGAGAAGCGAAACCTAT
CCATCCACCCGAAACTGAACGACATGGACAACATCCGCAAGCTGTACCGC
GAGGGCAACATTTCCAACCCGGGCGTGTGCAACGCCACGGAGTTGGACGA
AAGGACGTCGATAGCGCCGGAGAACGAACGCGCGTCCAAATGGAAGGCGC
TTCTTGGCAGCGGCGTGGTGGCGCAATTGGCACTCAAGATCATATTCACA
AGTTGGATCATACACCTGCTGGCGTTTATGGAACCTATGGTGTTGCACAA
TGGCAAGGTTGAACTGTGGGGCATGAAGCCGAAGATGTTGTTGACGGGCG
AAGACGAAAGGGCGATTCGAAGATTCGCCAGGGACAAGCATTTATTGCCG
CTAATCGTGTTTAGTGTTCTGCTTGTTGTGGAAGTGGTGCTGTTCGGGTT
CAGTATATACACAACGATCAGCGGTGCTGGCGAAATTGTGGCACAGAACG
CAACCGTACCGCTGACACAAGCAGCAGAGTTTCGATGCCCTTCCTCGCTC
GGAATGTAA
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protein sequence of Ggra9974.t1

>Ggra9974.t1 ID=Ggra9974.t1|Name=Ggra9974.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=653bp
MGTFPPSAASFLSKLRFCTTATRSTNERVLPLPDATPYPDRLQSTPRSPS
PPPFLRDSTQQASTQAPPSNLKTSQSLPSRPHHAKHPNKPENAAALKAAF
TEKVRDLEAQLPNRSHRFKYNPGLAQRLLVSARLKSKLETSRIVRLPYSK
SYKYTLVVALVLTGAFLTPQMLPKWIGFEWASPEDLCQSPDQKLVHIRQQ
LVNLTSLRESKHFLEQQQYTLHCMNRSSADFYHGANGKPARFLWPHECDS
DKAKVALSETTCVEQKANVCKRVNFFARIFASISGDCVQKVGPDLCVEST
NAERSESLYQLEKERNAMQQNLSEIDTEPIVSTAESKISEVVSRLMTQID
LAADCFIVYSVIAVMVGIPLVISKREKTSRVMTATLGLTKMTFVMVFIIL
LSLYDSFFLVFQDTDFPRLFGNFLNDPCYVNPEFSSKRVGMIVDMCNNIS
YIEQQSDYVLQRMDTVYYDTRLFGHCKDEKRNLSIHPKLNDMDNIRKLYR
EGNISNPGVCNATELDERTSIAPENERASKWKALLGSGVVAQLALKIIFT
SWIIHLLAFMEPMVLHNGKVELWGMKPKMLLTGEDERAIRRFARDKHLLP
LIVFSVLLVVEVVLFGFSIYTTISGAGEIVAQNATVPLTQAAEFRCPSSL
GM*
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mRNA from alignment at tig00000213_pilon:76923..78881-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra9974.t1 ID=Ggra9974.t1|Name=Ggra9974.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1959bp|location=Sequence derived from alignment at tig00000213_pilon:76923..78881- (Gracilaria gracilis GNS1m male)
ATGGGCACATTTCCCCCCTCTGCTGCTTCATTTCTTTCCAAACTGCGTTT
CTGCACCACGGCCACCCGCAGCACAAACGAACGCGTCTTGCCGCTGCCGG
ATGCCACTCCATACCCAGACCGCCTTCAATCCACACCGCGCTCACCTTCT
CCACCGCCTTTTCTTCGAGACAGTACCCAACAAGCGTCCACACAAGCTCC
TCCTTCAAACCTAAAAACTTCCCAATCGCTGCCGTCCCGACCTCATCATG
CAAAACATCCGAACAAGCCCGAGAACGCTGCTGCACTCAAGGCCGCCTTC
ACTGAAAAGGTCCGCGATTTGGAGGCGCAGCTTCCAAATCGATCGCATCG
CTTCAAGTACAACCCGGGGCTTGCGCAGCGTCTTCTCGTCAGCGCCCGCC
TGAAAAGCAAGCTGGAAACAAGCAGGATCGTGCGTCTACCCTACTCGAAG
AGCTACAAGTACACGCTTGTGGTCGCGCTAGTGCTCACGGGCGCCTTTCT
CACCCCGCAGATGCTTCCAAAGTGGATTGGCTTCGAATGGGCTTCGCCGG
AGGACTTGTGTCAATCGCCCGACCAAAAGCTCGTGCACATTCGCCAACAG
CTTGTCAACCTCACCTCGCTGCGAGAGTCGAAGCACTTTTTGGAGCAACA
GCAGTACACGCTGCACTGCATGAATCGTTCGTCGGCCGATTTCTACCACG
GCGCGAATGGCAAGCCGGCGCGCTTTCTGTGGCCGCACGAGTGCGACAGC
GACAAGGCCAAGGTTGCGCTCAGCGAAACCACCTGCGTGGAGCAGAAGGC
AAACGTGTGCAAGCGCGTCAACTTCTTTGCGAGGATCTTTGCGTCGATCA
GCGGCGATTGCGTGCAAAAAGTTGGCCCCGATCTATGTGTGGAAAGCACC
AACGCCGAACGTTCCGAGTCGTTGTATCAGTTGGAGAAGGAACGAAACGC
TATGCAACAAAACCTGTCGGAAATCGATACGGAACCCATAGTTTCTACCG
CCGAGTCAAAGATTAGTGAGGTGGTAAGCAGGTTGATGACGCAGATTGAT
CTGGCGGCGGACTGCTTTATTGTGTACAGTGTAATCGCAGTGATGGTAGG
TATCCCGCTTGTGATATCGAAACGCGAAAAGACGTCACGGGTCATGACTG
CAACGCTGGGGTTAACGAAGATGACTTTTGTGATGGTGTTCATCATTCTG
CTGTCGTTGTACGACTCGTTCTTTCTGGTGTTTCAAGACACGGACTTTCC
GCGGCTGTTTGGCAACTTTTTGAACGACCCGTGCTACGTGAACCCCGAGT
TTTCGTCCAAGAGAGTGGGTATGATCGTGGACATGTGCAACAACATTTCG
TACATTGAGCAACAGAGCGACTACGTGCTACAGCGAATGGACACGGTGTA
CTACGACACAAGACTGTTTGGGCATTGCAAAGACGAGAAGCGAAACCTAT
CCATCCACCCGAAACTGAACGACATGGACAACATCCGCAAGCTGTACCGC
GAGGGCAACATTTCCAACCCGGGCGTGTGCAACGCCACGGAGTTGGACGA
AAGGACGTCGATAGCGCCGGAGAACGAACGCGCGTCCAAATGGAAGGCGC
TTCTTGGCAGCGGCGTGGTGGCGCAATTGGCACTCAAGATCATATTCACA
AGTTGGATCATACACCTGCTGGCGTTTATGGAACCTATGGTGTTGCACAA
TGGCAAGGTTGAACTGTGGGGCATGAAGCCGAAGATGTTGTTGACGGGCG
AAGACGAAAGGGCGATTCGAAGATTCGCCAGGGACAAGCATTTATTGCCG
CTAATCGTGTTTAGTGTTCTGCTTGTTGTGGAAGTGGTGCTGTTCGGGTT
CAGTATATACACAACGATCAGCGGTGCTGGCGAAATTGTGGCACAGAACG
CAACCGTACCGCTGACACAAGCAGCAGAGTTTCGATGCCCTTCCTCGCTC
GGAATGTAA
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Coding sequence (CDS) from alignment at tig00000213_pilon:76923..78881-

>Ggra9974.t1 ID=Ggra9974.t1|Name=Ggra9974.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=1959bp|location=Sequence derived from alignment at tig00000213_pilon:76923..78881- (Gracilaria gracilis GNS1m male)
ATGGGCACATTTCCCCCCTCTGCTGCTTCATTTCTTTCCAAACTGCGTTT
CTGCACCACGGCCACCCGCAGCACAAACGAACGCGTCTTGCCGCTGCCGG
ATGCCACTCCATACCCAGACCGCCTTCAATCCACACCGCGCTCACCTTCT
CCACCGCCTTTTCTTCGAGACAGTACCCAACAAGCGTCCACACAAGCTCC
TCCTTCAAACCTAAAAACTTCCCAATCGCTGCCGTCCCGACCTCATCATG
CAAAACATCCGAACAAGCCCGAGAACGCTGCTGCACTCAAGGCCGCCTTC
ACTGAAAAGGTCCGCGATTTGGAGGCGCAGCTTCCAAATCGATCGCATCG
CTTCAAGTACAACCCGGGGCTTGCGCAGCGTCTTCTCGTCAGCGCCCGCC
TGAAAAGCAAGCTGGAAACAAGCAGGATCGTGCGTCTACCCTACTCGAAG
AGCTACAAGTACACGCTTGTGGTCGCGCTAGTGCTCACGGGCGCCTTTCT
CACCCCGCAGATGCTTCCAAAGTGGATTGGCTTCGAATGGGCTTCGCCGG
AGGACTTGTGTCAATCGCCCGACCAAAAGCTCGTGCACATTCGCCAACAG
CTTGTCAACCTCACCTCGCTGCGAGAGTCGAAGCACTTTTTGGAGCAACA
GCAGTACACGCTGCACTGCATGAATCGTTCGTCGGCCGATTTCTACCACG
GCGCGAATGGCAAGCCGGCGCGCTTTCTGTGGCCGCACGAGTGCGACAGC
GACAAGGCCAAGGTTGCGCTCAGCGAAACCACCTGCGTGGAGCAGAAGGC
AAACGTGTGCAAGCGCGTCAACTTCTTTGCGAGGATCTTTGCGTCGATCA
GCGGCGATTGCGTGCAAAAAGTTGGCCCCGATCTATGTGTGGAAAGCACC
AACGCCGAACGTTCCGAGTCGTTGTATCAGTTGGAGAAGGAACGAAACGC
TATGCAACAAAACCTGTCGGAAATCGATACGGAACCCATAGTTTCTACCG
CCGAGTCAAAGATTAGTGAGGTGGTAAGCAGGTTGATGACGCAGATTGAT
CTGGCGGCGGACTGCTTTATTGTGTACAGTGTAATCGCAGTGATGGTAGG
TATCCCGCTTGTGATATCGAAACGCGAAAAGACGTCACGGGTCATGACTG
CAACGCTGGGGTTAACGAAGATGACTTTTGTGATGGTGTTCATCATTCTG
CTGTCGTTGTACGACTCGTTCTTTCTGGTGTTTCAAGACACGGACTTTCC
GCGGCTGTTTGGCAACTTTTTGAACGACCCGTGCTACGTGAACCCCGAGT
TTTCGTCCAAGAGAGTGGGTATGATCGTGGACATGTGCAACAACATTTCG
TACATTGAGCAACAGAGCGACTACGTGCTACAGCGAATGGACACGGTGTA
CTACGACACAAGACTGTTTGGGCATTGCAAAGACGAGAAGCGAAACCTAT
CCATCCACCCGAAACTGAACGACATGGACAACATCCGCAAGCTGTACCGC
GAGGGCAACATTTCCAACCCGGGCGTGTGCAACGCCACGGAGTTGGACGA
AAGGACGTCGATAGCGCCGGAGAACGAACGCGCGTCCAAATGGAAGGCGC
TTCTTGGCAGCGGCGTGGTGGCGCAATTGGCACTCAAGATCATATTCACA
AGTTGGATCATACACCTGCTGGCGTTTATGGAACCTATGGTGTTGCACAA
TGGCAAGGTTGAACTGTGGGGCATGAAGCCGAAGATGTTGTTGACGGGCG
AAGACGAAAGGGCGATTCGAAGATTCGCCAGGGACAAGCATTTATTGCCG
CTAATCGTGTTTAGTGTTCTGCTTGTTGTGGAAGTGGTGCTGTTCGGGTT
CAGTATATACACAACGATCAGCGGTGCTGGCGAAATTGTGGCACAGAACG
CAACCGTACCGCTGACACAAGCAGCAGAGTTTCGATGCCCTTCCTCGCTC
GGAATGTAA
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