Ggra9959.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra9959.t1
Unique NameGgra9959.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length288
Homology
The following BLAST results are available for this feature:
BLAST of Ggra9959.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 109..113
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 42..64
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 114..131
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 19..41
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 85..108
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 132..287
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 65..84
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..14
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..18
NoneNo IPR availableTMHMMTMhelixcoord: 42..64
NoneNo IPR availableTMHMMTMhelixcoord: 85..107

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000882_piloncontigtig00000882_pilon:15693..16556 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra9959.t1Ggra9959.t1Gracilaria gracilis GNS1m malemRNAtig00000882_pilon 15693..16556 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra9959.t1 ID=Ggra9959.t1|Name=Ggra9959.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=288bp
MEASLQLASVVLLLAVDAVPPPSQRWCTRTGASSTDPSARVVPPSAVVAF
IVCMLFPVICRFVIDLLDLYANPRPHNTFLPKAKLVILIVMFYASCLTGL
ALAVFAIIQHNVDMGGGAVGLLISVYASNLTRSSSSRLRMTLCCQLFHHL
PDASAPLLSYTLKRLTRMAISSDLWASLPFDQYLELVSFCVQLGDEQMLD
IMFNVGSSLYTTSRLRHLHTRMPHFQDLHDAGNPLVKHTFSALVRHGVRE
NYSSSLPFSERVDAAIHCMQTGETQLLNAILHFDSAH*
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