Ggra9934.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra9934.t1
Unique NameGgra9934.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length262
Homology
BLAST of Ggra9934.t1 vs. uniprot
Match: A0A2V3J262 (tRNA (Adenine(37)-N6)-methyltransferase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J262_9FLOR)

HSP 1 Score: 365 bits (938), Expect = 3.250e-125
Identity = 169/225 (75.11%), Postives = 195/225 (86.67%), Query Frame = 0
Query:   13 VHSPSQNDGQPL----------PSRRVSDQLAAKRREKPPMRYTEDFQTPETVTMRTIGVVRSPYKERFGTPRQPIVTQNTLGNEMQPATIELFKNCRYELALRGLAQFEYCWVVSFFHLNQGFNPLVTPPRGPRQKQGVFATRSPHRPNSIGLSCIRITSVDEKEGLVHLLGVDLLDGTPVLDIKPYVPYCDSFPNAKSGWLDKLSEDMKAPDSLGYHPPPAHL 227
            + SP QN  Q             +R+V+  +A KRREKPPMRYT+DF+TP  V++ TIGVVRS YKERFGTPRQP VT+NTLGN+MQPATI+L+++C+Y+LALRGLAQFEYCWV+S+FHLNQGFNPLVTPPRGPR+KQGVFATRSPHRPNSIGLSCIRIT VDEK+GL+H+LGVDLLDGTPVLD+KPYVPYCDSFP AK+GWLD L EDMKAPD LGY+PPPAHL
Sbjct:   13 IESPEQNKNQQSRHKDEQAMLNETRQVTPYIATKRREKPPMRYTDDFETPTQVSLNTIGVVRSLYKERFGTPRQPNVTKNTLGNQMQPATIQLYESCKYDLALRGLAQFEYCWVISYFHLNQGFNPLVTPPRGPRKKQGVFATRSPHRPNSIGLSCIRITGVDEKKGLIHVLGVDLLDGTPVLDVKPYVPYCDSFPKAKAGWLDTLREDMKAPDVLGYYPPPAHL 237          
BLAST of Ggra9934.t1 vs. uniprot
Match: A0A7S3A0C0 (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3A0C0_9RHOD)

HSP 1 Score: 265 bits (677), Expect = 4.490e-86
Identity = 120/193 (62.18%), Postives = 150/193 (77.72%), Query Frame = 0
Query:   35 AKRREKPPMRYTEDFQTPETVTMRTIGVVRSPYKERFGTPRQPIVTQNTLGNEMQPATIELFKNCRYELALRGLAQFEYCWVVSFFHLNQGFNPLVTPPRGPRQKQGVFATRSPHRPNSIGLSCIRITSVDEKEGLVHLLGVDLLDGTPVLDIKPYVPYCDSFPNAKSGWLDKLSEDMKAPDSLGYHPPPAHL 227
            A ++++PP+ +T  FQTP +++++ IGVVRSPYKERFGTPRQ  V + ++GN  Q   I L  + RYE ALRGL  F+YCWV+ + HLN G+NPLVTPPRGPR KQG+FATR+PHRPN I LS ++IT VD K  +VH+ G+DLLDGTP+LDIKPYVPY D+FPNA +GWLD + EDMK PD L Y PPP HL
Sbjct:   28 ASKKQRPPLDHTSMFQTPTSMSVQAIGVVRSPYKERFGTPRQATVWEQSIGNAPQDGEIHLIGDPRYEHALRGLDGFDYCWVICWMHLNTGWNPLVTPPRGPRTKQGIFATRAPHRPNPISLSALKITRVDYKNRIVHVKGLDLLDGTPILDIKPYVPYADAFPNAAAGWLDNI-EDMKGPDYLAYSPPPPHL 219          
BLAST of Ggra9934.t1 vs. uniprot
Match: A0A7S0T3K0 (Hypothetical protein (Fragment) n=1 Tax=Erythrolobus madagascarensis TaxID=708628 RepID=A0A7S0T3K0_9RHOD)

HSP 1 Score: 255 bits (652), Expect = 3.490e-83
Identity = 122/175 (69.71%), Postives = 138/175 (78.86%), Query Frame = 0
Query:   51 TPETVTMRTIGVVRSPYKERFGTPRQPIVTQNTLGNEMQPATIELFKNC-RYELALRGLAQFEYCWVVSFFHLNQGFNPLVTPPRGPRQKQGVFATRSPHRPNSIGLSCIRITSVDEKEGLVHLLGVDLLDGTPVLDIKPYVPYCDSFPNAKSGWLDKLSEDMKAPDSLGYHPPP 224
            TP +V++  IGVVRSPYKERFGTPRQ +VTQ TL    QPA IEL  +  R  LALRGL QFEYCWVVSF HLN G+NPL+ PPRGPR+KQGVFATRSPHRPN + LS +RIT+VDEK   VH+LG+DLLDGTPVLDIKPYVPY D+FP A +GWLD+L   M  PD L Y PPP
Sbjct:    2 TPTSVSLDVIGVVRSPYKERFGTPRQAVVTQQTLHGTAQPAYIELCGDVDRMSLALRGLDQFEYCWVVSFMHLNTGWNPLIRPPRGPRRKQGVFATRSPHRPNPLSLSALRITAVDEKARRVHVLGIDLLDGTPVLDIKPYVPYSDAFPAAAAGWLDELDMAMDGPDRLDYSPPP 176          
BLAST of Ggra9934.t1 vs. uniprot
Match: A0A7S3XP01 (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XP01_HETAK)

HSP 1 Score: 243 bits (619), Expect = 3.870e-77
Identity = 114/193 (59.07%), Postives = 145/193 (75.13%), Query Frame = 0
Query:   40 KPPMRYTEDFQTPETVTMRTIGVVRSPYKERFGTPRQPIVTQNTLGNEMQPATIELFKNCRYELALRGLAQFEYCWVVSFFHLNQGFNPLVTPPRGPRQ-KQGVFATRSPHRPNSIGLSCIRITSVDEKEGLVHLLGVDLLDGTPVLDIKPYVPYCDSFPNAKSGWL---DKLS-EDMKAPDSLGYHPPPAHL 227
            KP   YTE F TPE+V+M TI VVRSPYKERFGTPRQP+VT+ TLG   Q   I   KN  +E+AL+ L  FEYCW++++FHLN+G+NP V PPRG    K G+FATRSPHRPN IGLS  +I SVD ++G+V + G+DLLDGTPVLD+KPYVPY D+FP+A++GWL   D+++ +D+   D L Y PPP H+
Sbjct:   55 KPQQFYTEQFTTPESVSMETIAVVRSPYKERFGTPRQPVVTKGTLGGSAQIGEIVFKKNRNFEIALQDLEGFEYCWLITYFHLNKGWNPKVKPPRGKHDAKLGLFATRSPHRPNPIGLSACKIHSVDHRQGVVRVAGLDLLDGTPVLDLKPYVPYADAFPHARAGWLNSSDRVTVDDLAEADRLDYWPPPKHI 247          
BLAST of Ggra9934.t1 vs. uniprot
Match: A0A7S1WEL1 (Hypothetical protein n=1 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1WEL1_ALECA)

HSP 1 Score: 233 bits (594), Expect = 8.640e-74
Identity = 107/193 (55.44%), Postives = 139/193 (72.02%), Query Frame = 0
Query:   37 RREKPPMRYTEDFQTPETVTMRTIGVVRSPYKERFGTPRQPIVTQNTLGNEMQPATIELFKNCRYE--LALRGLAQFEYCWVVSFFHLNQGFNPLVTPPRGPRQKQGVFATRSPHRPNSIGLSCIRITSVDEKEGLVHLLGVDLLDGTPVLDIKPYVPYCDSFPNAKSGWLDKLSEDMKAPDSLGYHPPPAHL 227
            R  +PP  +T+ F TP  VT+RTIGVVRSPYKERFG PRQP +++  LG   Q  TI+   N   +  LAL+ L  FE  W+V + HLN+G++P VTPPRG RQK+G+FATRSPHRPN I LS  ++ SVD K   + + G+DLLDGTPVLD+KPYVPYCDS+P+A++GW+D++  +   PD L Y PPP H+
Sbjct:   23 RASRPPQVHTDAFPTPLQVTLRTIGVVRSPYKERFGCPRQPPISKGVLGGSAQEGTIQFLDNPDGDIALALKDLEGFERIWIVGYLHLNEGWSPRVTPPRGARQKRGLFATRSPHRPNHISLSACQLLSVDAKAKTLTVRGLDLLDGTPVLDVKPYVPYCDSYPSARAGWIDEVEGEHDGPDRLAYSPPPPHI 215          
BLAST of Ggra9934.t1 vs. uniprot
Match: A0A6U1NSP7 (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1NSP7_9STRA)

HSP 1 Score: 228 bits (582), Expect = 1.430e-70
Identity = 120/263 (45.63%), Postives = 158/263 (60.08%), Query Frame = 0
Query:   33 LAAKRR---EKPPMRYTEDFQTPETVTMRTIGVVRSPYKERFGTPRQPIVTQNTLGNEMQPATIELFKNCRYELALRGLAQFEYCWVVSFFHLNQGFNPLVTPPR-----------------------------------------GP--RQKQGVFATRSPHRPNSIGLSCIRITSVDEKEGLVHLLGVDLLDGTPVLDIKPYVPYCDSFPNAKSGWLDKLS-EDMKAPDSLGYHPPPAHLMQGSSTKASEAQEEYEKREVE 248
            + AKRR   +KP   YTE F++PE +T   I VVRSPYKERFGTPRQP+V   TLGN+ Q A++    + R   AL  L +FEYCW++S FHLN+G+ P+V PPR                                         GP  + ++G+F+TRSPHRPN IGLS  +I SVD K+G+++++G D+LDGTP+LD+KPYVPYCD+FPNA++GWLD++  E +  PD LGY PPP  L QG    A    E  E  + E
Sbjct:   57 MNAKRRRSRKKPQQFYTEKFESPEKITFEAIAVVRSPYKERFGTPRQPVVVDGTLGNKAQIASLVFKDDQRIRQALYDLEEFEYCWIISHFHLNKGWRPMVRPPRNSGTVQLQQVIKEKNTADSNGIREQEDHTTADGGSEGEADQGPADQPRKGLFSTRSPHRPNQIGLSACQIHSVDPKKGILNVIGHDMLDGTPILDVKPYVPYCDAFPNARAGWLDEIDREHIAGPDHLGYWPPPQRL-QGEDETAQTLGESKEAEQPE 318          
BLAST of Ggra9934.t1 vs. uniprot
Match: R1DL83 (TsaA-like domain-containing protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1DL83_EMIHU)

HSP 1 Score: 225 bits (574), Expect = 1.120e-69
Identity = 109/193 (56.48%), Postives = 134/193 (69.43%), Query Frame = 0
Query:   40 KPPMRYTEDF--QTPETVTMRTIGVVRSPYKERFGTPRQPIVTQNTLGNEMQPATIELFKNCRYELALRGLAQFEYCWVVSFFHLNQGFNPLVTPPRGPRQ-KQGVFATRSPHRPNSIGLSCIRITSVDEKEGLVHLLGVDLLDGTPVLDIKPYVPYCDSFPNAKSGWLDKLSEDMKAPDSLGYHPPPAHLMQ 229
            +PP+ YT+ F       VT+  IGV+RSPYKERFGTPRQP VT    G   Q   IEL  +   +  LRGLA F+YCW ++  HLN G+ PLV PPRGPR+ KQGVFATR+PHRPN I LS +++  VDE    V + G+DLLDGTPVLD+KPYVPY DSFP AK+GW+D++  +    D LGY PPP HL+Q
Sbjct:   27 RPPLEYTDAFADHAAAPVTLTPIGVIRSPYKERFGTPRQPTVTTQVSGGGAQRGCIELRPDAGLDHTLRGLAGFDYCWAITLMHLNAGWKPLVRPPRGPRRAKQGVFATRAPHRPNPIALSALKVVEVDEAALRVTVEGLDLLDGTPVLDLKPYVPYADSFPRAKAGWVDEVRAEE---DRLGYWPPPPHLLQ 216          
BLAST of Ggra9934.t1 vs. uniprot
Match: A0A7S2WDG7 (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WDG7_9STRA)

HSP 1 Score: 218 bits (554), Expect = 5.500e-68
Identity = 104/196 (53.06%), Postives = 133/196 (67.86%), Query Frame = 0
Query:   48 DFQTPETVTMRTIGVVRSPYKERFGTPRQPIVT-QNTLGNEMQPATIELFKNCRYELALRGLAQFEYCWVVSFFHLNQGFN------PLVTPPRGPRQ--KQGVFATRSPHRPNSIGLSCIRITSVDEKEGLVHLLGVDLLDGTPVLDIKPYVPYCDSFPNAKSGWLDKLSEDMKAPDSLGYHPPPAHLMQGSSTK 234
            DF  P  V +  IG VRSPY ERFGTPRQP V  +  L     P T++L  + R+  AL G+A F++ WV+S+ HLN+  N      PLV PPRG  +  KQG+FATR+PHRPN +GLS +R+T VD K+  +H+LG+DLLDGTPVLD+KPY+   DSFP AK+GWLD L E+ +APD L Y+PPP HL  G   +
Sbjct:    1 DFPLPTEVLLEPIGFVRSPYTERFGTPRQPTVAGEGVLHGTQLPGTLQLLDDDRFRTALEGVAGFDFVWVISYLHLNRQSNEHRHWKPLVQPPRGATRAPKQGLFATRAPHRPNPLGLSALRVTGVDPKQLQIHVLGLDLLDGTPVLDVKPYIAAYDSFPEAKAGWLDSLEEETQAPDYLPYYPPPRHLRPGGKVR 196          
BLAST of Ggra9934.t1 vs. uniprot
Match: A0A812QIS2 (TrmO protein n=1 Tax=Symbiodinium sp. CCMP2456 TaxID=1519616 RepID=A0A812QIS2_9DINO)

HSP 1 Score: 215 bits (548), Expect = 5.080e-66
Identity = 104/194 (53.61%), Postives = 136/194 (70.10%), Query Frame = 0
Query:   34 AAKRREKPPMRYTEDFQTPETVTMRTIGVVRSPYKERFGTPRQPIVTQNTLGNEMQPATIELFKNC-----RYELALRGLAQFEYCWVVSFFHLNQGFNPLVTPPRGPRQKQGVFATRSPHRPNSIGLSCIRITSVDEKEGLVHLLGVDLLDGTPVLDIKPYVPYCDSFPNAKSGWLDKLSEDMKAPDSLGYHP 222
            A KR  +PP  +T+ F TP  V+M+T+ VVRSPYKERFG PRQP VT+  LG E     +EL  +      +  +ALR L+ FE+ WV+S+ H+N+G++  VTPPRGPR+K+G+FATR+PHRPN IGLS  R+  VD  +  V + G+DLLDGTPVLDIKPYVPYCDSF  A++GWL+++ E     D L Y P
Sbjct:   63 APKRASRPPQVHTDAFPTPMEVSMQTLAVVRSPYKERFGCPRQPTVTEGVLGGEAGAGFLELVPSDQNPEEKLRMALRELSGFEFIWVISYLHMNEGWSASVTPPRGPRRKRGLFATRAPHRPNHIGLSACRLLGVDAAKLQVSVHGLDLLDGTPVLDIKPYVPYCDSFAGARAGWLEEIDE-ANGRDHLAYWP 255          
BLAST of Ggra9934.t1 vs. uniprot
Match: A0A835YNQ9 (TsaA-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNQ9_9STRA)

HSP 1 Score: 208 bits (530), Expect = 9.830e-65
Identity = 100/170 (58.82%), Postives = 123/170 (72.35%), Query Frame = 0
Query:   55 VTMRTIGVVRSPYKERFGTPRQPIVTQNTLGNEMQPATIELFKNCRYELALRGLAQFEYCWVVSFFHLNQGFNPLVTPPRGPRQKQGVFATRSPHRPNSIGLSCIRITSVDEKEGLVHLLGVDLLDGTPVLDIKPYVPYCDSFPNAKSGWLDKLSEDMKAPDSLGYHPPP 224
            + M TIGVVRSPYKERFGTPRQ  VT   L  + Q   +   +   +E+AL  L  F+Y WV+S+ HLNQG+NP V PPRGPR K+G+F+TRSPHRPNSI LS ++I SVD K   V + G+DLLDGTP+LDIKPYVPYCD+FP AK+GWL++LS  +   D L   PPP
Sbjct:    1 MVMDTIGVVRSPYKERFGTPRQANVTAGVLEGKAQHGQLVFSRGRNFEVALEDLDGFDYVWVISYMHLNQGWNPKVKPPRGPRVKRGLFSTRSPHRPNSIALSAVKIVSVDPKGLTVTVEGLDLLDGTPILDIKPYVPYCDAFPGAKTGWLEELSS-IDEVDYLPSKPPP 169          
The following BLAST results are available for this feature:
BLAST of Ggra9934.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J2623.250e-12575.11tRNA (Adenine(37)-N6)-methyltransferase n=1 Tax=Gr... [more]
A0A7S3A0C04.490e-8662.18Hypothetical protein n=2 Tax=Rhodosorus marinus Ta... [more]
A0A7S0T3K03.490e-8369.71Hypothetical protein (Fragment) n=1 Tax=Erythrolob... [more]
A0A7S3XP013.870e-7759.07Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S1WEL18.640e-7455.44Hypothetical protein n=1 Tax=Alexandrium catenella... [more]
A0A6U1NSP71.430e-7045.63Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
R1DL831.120e-6956.48TsaA-like domain-containing protein n=1 Tax=Emilia... [more]
A0A7S2WDG75.500e-6853.06Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
A0A812QIS25.080e-6653.61TrmO protein n=1 Tax=Symbiodinium sp. CCMP2456 Tax... [more]
A0A835YNQ99.830e-6558.82TsaA-like domain-containing protein n=1 Tax=Tribon... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR023370TrmO-like, N-terminal domainPFAMPF01980TrmOcoord: 72..195
e-value: 1.8E-38
score: 131.4
IPR023370TrmO-like, N-terminal domainTIGRFAMTIGR00104TIGR00104coord: 55..201
e-value: 2.9E-37
score: 126.0
IPR023370TrmO-like, N-terminal domainPROSITEPS51668TSAA_2coord: 57..199
score: 63.196053
IPR023370TrmO-like, N-terminal domainCDDcd09281UPF0066coord: 60..190
e-value: 4.79788E-50
score: 158.809
IPR036414YaeB, N-terminal domain superfamilyGENE3D2.40.30.70coord: 55..211
e-value: 1.5E-50
score: 172.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 31..46
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 213..261
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..16
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..47
NoneNo IPR availablePANTHERPTHR12818:SF0TRNA (ADENINE(37)-N6)-METHYLTRANSFERASEcoord: 48..207
IPR040372YaeB-likePANTHERPTHR12818UNCHARACTERIZEDcoord: 48..207
IPR023368Uncharacterised protein family UPF0066, conserved sitePROSITEPS01318TSAA_1coord: 141..152
IPR036413YaeB-like superfamilySUPERFAMILY118196YaeB-likecoord: 54..207

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000887_piloncontigtig00000887_pilon:130501..131455 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra9934.t1Ggra9934.t1Gracilaria gracilis GNS1m malemRNAtig00000887_pilon 130501..131455 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra9934.t1 ID=Ggra9934.t1|Name=Ggra9934.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=262bp
MQKADAQDRDDRVHSPSQNDGQPLPSRRVSDQLAAKRREKPPMRYTEDFQ
TPETVTMRTIGVVRSPYKERFGTPRQPIVTQNTLGNEMQPATIELFKNCR
YELALRGLAQFEYCWVVSFFHLNQGFNPLVTPPRGPRQKQGVFATRSPHR
PNSIGLSCIRITSVDEKEGLVHLLGVDLLDGTPVLDIKPYVPYCDSFPNA
KSGWLDKLSEDMKAPDSLGYHPPPAHLMQGSSTKASEAQEEYEKREVESN
ANTSGLDTNKE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR023370TrmO-like_N
IPR036414YaeB_N_sf
IPR040372YaeB-like
IPR023368UPF0066_cons_site
IPR036413YaeB-like_sf