Ggra9918.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Ggra9918.t1
Unique Name	Ggra9918.t1
Type	polypeptide
Organism	Gracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length	401

Homology

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BLAST of Ggra9918.t1 vs. uniprot
Match: A0A2V3J1W8 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J1W8_9FLOR)

HSP 1 Score: 224 bits (571), Expect = 2.290e-66
Identity = 146/294 (49.66%), Postives = 182/294 (61.90%), Query Frame = 0

Query:  119 DAQLLRLQQLLTQLYPSPPSLRPALRALHAARERLRLLRAALRDQLRAVRKLDDAANLLLLVSEHVALLISCHRA-----PSPPLPPACS-----ARRASCLSRCERDAPAADSA---------------------------------APAAATPT----IPRGYKARYLRRCSVLAAEALAAAVDLSSYLARLLDARGQHLLVPQIHALCRPCLSIVDLPCGFTLIFRTELLRKMALDAAAMRDVALQWRRKQWLFCLKLRRNLAACRRAVQRTMLHVLQMRAALAEHEFVSH 365
            +A L+R+QQL  QLYP+ P +RP L AL   R+RL LLR A RDQ  A+ KLDD ANLLLLVSEH+ALLISC+        S      C+     A R  C+S+  +D  A D                                   A     PT    IPR YKA+YLR+CS+LAA+AL++AVDLSS+LA+ L  RGQHLLVP IH LCRPCLSIVDLP GFTLIFR+ELL++MA +A  MR    +WRRKQ  FCLKLR+NLAACR+++QR ++ ++ +R  LA  EF S+
Sbjct:   68 NALLIRVQQLFAQLYPTHPRIRPLLAALATRRDRLLLLRGAFRDQRAAIAKLDDGANLLLLVSEHIALLISCYSTHSSSCTSXXXXXXCASLQQTASRLWCMSKPRQDQLACDDEXXXXXXXXXXXXXXXXXXXXXXXXXXXHVQQRQASDHVRPTLSLVIPRNYKAKYLRKCSLLAADALSSAVDLSSFLAQQLHTRGQHLLVPDIHMLCRPCLSIVDLPGGFTLIFRSELLQRMAEEALRMRRQVFEWRRKQVAFCLKLRKNLAACRKSMQRELMALMDVRMELALQEFGSN 361

The following BLAST results are available for this feature:

BLAST of Ggra9918.t1 vs. uniprot

BLAST of Ggra9918.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A2V3J1W8	2.290e-66	49.66	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 143..170
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 26..40
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 366..400
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 372..400
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..46
None	No IPR available	PANTHER	PTHR45725	FORMIN HOMOLOGY 2 FAMILY MEMBER	coord: 22..393
None	No IPR available	PANTHER	PTHR45725:SF1	DISHEVELED-ASSOCIATED ACTIVATOR OF MORPHOGENESIS 1	coord: 22..393

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00000887_pilon	contig	tig00000887_pilon:92215..93417 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria gracilis GNS1m male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Ggra9918.t1	Ggra9918.t1	Gracilaria gracilis GNS1m male	mRNA	tig00000887_pilon 92215..93417 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Ggra9918.t1 ID=Ggra9918.t1|Name=Ggra9918.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=401bp
MTPSSPRASPPRSPSPRSSSSSSTSSSPPPPSPPPSPPISFVSLSSSTAS
ERSASLAATGAPLAAARRRALYHEYKSLRTHALSQSPAPAAAAASASRKR
VGAAAGAGGGGGGGGAGSDAQLLRLQQLLTQLYPSPPSLRPALRALHAAR
ERLRLLRAALRDQLRAVRKLDDAANLLLLVSEHVALLISCHRAPSPPLPP
ACSARRASCLSRCERDAPAADSAAPAAATPTIPRGYKARYLRRCSVLAAE
ALAAAVDLSSYLARLLDARGQHLLVPQIHALCRPCLSIVDLPCGFTLIFR
TELLRKMALDAAAMRDVALQWRRKQWLFCLKLRRNLAACRRAVQRTMLHV
LQMRAALAEHEFVSHVRAPAPASSPPSSPPPPPPPPPRPPPPPRAEQLRV
*