Ggra9909.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra9909.t1
Unique NameGgra9909.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length289
Homology
BLAST of Ggra9909.t1 vs. uniprot
Match: A0A2V3J1Q6 (Imidazoleglycerol-phosphate dehydratase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J1Q6_9FLOR)

HSP 1 Score: 381 bits (979), Expect = 4.190e-131
Identity = 199/282 (70.57%), Postives = 225/282 (79.79%), Query Frame = 0
Query:   13 AFCFTPSLPRPWRTRRATTHC-RPAPRVAPLCLSSPAPTPSPXXXXXXXXXXXXXXXXXTHVAPSHASR--PPRIATVSRTTNETAITLTVNVDGTGVCDVHTGIPFLDHMLAQLCSHGLFDLHVRAKGDLWIDDHHTNEDIAITLGMALSKALADKKGIRRFGHFVAPLDESLVEVVLDFSGRAHCEYSLQIPTQRVGTYDTQLVREFYHAVAGNAQMTLHVIQRSGINSHHIIEASFKSFARAMRMAVEYDPRSINSIPSSKGVLTDAAALES----NPT 287
            AFC +  L  P R    T  C R  P  AP+ LSSP+P                      HV         P R AT++RTTNETAITLT+N+DGTG+CDVHTGIPFLDHMLAQLCSHGLFDL++RAKGDLWIDDHHTNEDI ITLGMA++KAL++KKGIRRFGHFVAPLDESLVEVVLDFSGRAHCEY+LQIPTQRVGTYDTQLVREFYHA+AGNAQMTLHV+QR+G+NSHHIIEASFK+FARA+RMAVE+DPR +++IPSSKGVLTDAAAL+S    NPT
Sbjct:    5 AFCTSSFLHTPSRLAHPTHICNRHVPHTAPISLSSPSPP---------------------HVTXXXXXXFPPSRTATITRTTNETAITLTLNLDGTGICDVHTGIPFLDHMLAQLCSHGLFDLYLRAKGDLWIDDHHTNEDIGITLGMAIAKALSNKKGIRRFGHFVAPLDESLVEVVLDFSGRAHCEYALQIPTQRVGTYDTQLVREFYHALAGNAQMTLHVVQRAGLNSHHIIEASFKAFARAIRMAVEFDPRRLDTIPSSKGVLTDAAALDSKSKSNPT 265          
BLAST of Ggra9909.t1 vs. uniprot
Match: S0F2Y2 (Imidazoleglycerol-phosphate dehydratase n=1 Tax=Chondrus crispus TaxID=2769 RepID=S0F2Y2_CHOCR)

HSP 1 Score: 331 bits (849), Expect = 2.890e-111
Identity = 159/204 (77.94%), Postives = 180/204 (88.24%), Query Frame = 0
Query:   80 RPPRIATVSRTTNETAITLTVNVDGTGVCDVHTGIPFLDHMLAQLCSHGLFDLHVRAKGDLWIDDHHTNEDIAITLGMALSKALADKKGIRRFGHFVAPLDESLVEVVLDFSGRAHCEYSLQIPTQRVGTYDTQLVREFYHAVAGNAQMTLHVIQRSGINSHHIIEASFKSFARAMRMAVEYDPRSINSIPSSKGVLTDAAALE 283
            RP R A++SR T ET++++TV++DGTG CDV TGIPFLDHML QL SHGL DLH+RA GD WIDDHHTNED+ ITLGMA++KAL DKKGIRRFGHFVAPLDESL+EVVLDFSGR H EY LQIPT++VG YDTQLVREFY AVAGNAQMTLHV QR+G+NSHHIIEASFK+FARAMRMAVE DPR ++SIPSSKG LTD  AL+
Sbjct:   67 RPARCASISRQTRETSVSVTVDLDGTGQCDVQTGIPFLDHMLHQLSSHGLLDLHIRADGDYWIDDHHTNEDVGITLGMAIAKALGDKKGIRRFGHFVAPLDESLIEVVLDFSGRPHVEYGLQIPTEKVGKYDTQLVREFYMAVAGNAQMTLHVNQRAGLNSHHIIEASFKAFARAMRMAVELDPRRLDSIPSSKGALTDDVALQ 270          
BLAST of Ggra9909.t1 vs. uniprot
Match: A0A5J4YYU8 (Imidazoleglycerol-phosphate dehydratase n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YYU8_PORPP)

HSP 1 Score: 314 bits (805), Expect = 1.650e-104
Identity = 151/201 (75.12%), Postives = 176/201 (87.56%), Query Frame = 0
Query:   83 RIATVSRTTNETAITLTVNVDGTGVCDVHTGIPFLDHMLAQLCSHGLFDLHVRAKGDLWIDDHHTNEDIAITLGMALSKALADKKGIRRFGHFVAPLDESLVEVVLDFSGRAHCEYSLQIPTQRVGTYDTQLVREFYHAVAGNAQMTLHVIQRSGINSHHIIEASFKSFARAMRMAVEYDPRSINSIPSSKGVLTDAAALE 283
            R+A V+RTTNET ++++VN+DGTG CDV TGI FLDHML QL SHGL DL++RA+GD  IDDHHTNED+ ITLGMA++KAL DKKGIRRFGHF+APLDE+LVEVVLDFSGR H EY L+IPT+R+G +DTQLVREFY AVAGNAQ+T+HV Q SGINSHHI+EASFK+FARAMRMA+E DPR +  IPSSKGVLTDA  LE
Sbjct:   67 RVAQVARTTNETEVSVSVNLDGTGKCDVDTGIGFLDHMLNQLSSHGLLDLNIRARGDYHIDDHHTNEDVGITLGMAIAKALGDKKGIRRFGHFIAPLDEALVEVVLDFSGRPHLEYGLKIPTERIGKFDTQLVREFYSAVAGNAQITIHVRQLSGINSHHIVEASFKAFARAMRMALELDPRRLGGIPSSKGVLTDAQGLE 267          
BLAST of Ggra9909.t1 vs. uniprot
Match: A0A0S3TUP1 (Imidazoleglycerol-phosphate dehydratase n=17 Tax=Nostocales TaxID=1161 RepID=A0A0S3TUP1_9CYAN)

HSP 1 Score: 298 bits (763), Expect = 4.560e-99
Identity = 143/203 (70.44%), Postives = 171/203 (84.24%), Query Frame = 0
Query:   74 APSHASRPPRIATVSRTTNETAITLTVNVDGTGVCDVHTGIPFLDHMLAQLCSHGLFDLHVRAKGDLWIDDHHTNEDIAITLGMALSKALADKKGIRRFGHFVAPLDESLVEVVLDFSGRAHCEYSLQIPTQRVGTYDTQLVREFYHAVAGNAQMTLHVIQRSGINSHHIIEASFKSFARAMRMAVEYDPRSINSIPSSKGVL 276
            +P++ ++ PRIA+V RTT ET + +T+N+DGTGVC+  TGIPFLDHML Q+ SHGL DL ++A GDL IDDHHTNED+ ITLG A+SKAL DKKGI RFG+F+APLDE+L++V LDFSGR H  Y LQIPTQRVGTYDTQLVREF+ A+AGN+QMTLH+ Q  GINSHHIIEA+FK+FARAMRMA+E DPR    IPSSKGVL
Sbjct:   11 SPTNLTKTPRIASVRRTTGETDVHVTINLDGTGVCNAATGIPFLDHMLHQIASHGLIDLDIQATGDLHIDDHHTNEDVGITLGQAISKALGDKKGIVRFGNFLAPLDEALIQVALDFSGRPHLSYGLQIPTQRVGTYDTQLVREFFVALAGNSQMTLHIRQLDGINSHHIIEATFKAFARAMRMAIEIDPRRAGLIPSSKGVL 213          
BLAST of Ggra9909.t1 vs. uniprot
Match: A0A1J1LFA3 (Imidazoleglycerol-phosphate dehydratase n=2 Tax=Planktothrix TaxID=54304 RepID=A0A1J1LFA3_9CYAN)

HSP 1 Score: 295 bits (754), Expect = 1.100e-97
Identity = 140/195 (71.79%), Postives = 165/195 (84.62%), Query Frame = 0
Query:   82 PRIATVSRTTNETAITLTVNVDGTGVCDVHTGIPFLDHMLAQLCSHGLFDLHVRAKGDLWIDDHHTNEDIAITLGMALSKALADKKGIRRFGHFVAPLDESLVEVVLDFSGRAHCEYSLQIPTQRVGTYDTQLVREFYHAVAGNAQMTLHVIQRSGINSHHIIEASFKSFARAMRMAVEYDPRSINSIPSSKGVL 276
            PRIATV R T ET + +TVN+DGTGVC+V TG+PFLDHML Q+ SHGL DL ++A GD+ IDDHHTNED+ ITLG+A +KAL D+KGI RFGHF+APLDE+LV+V LDFSGR H  Y L+IPTQRVGTYDTQLVREF+ A+  N+QMTLH+ Q  GINSHHIIEA FK+FARA+RMAVE DPR +N+IPSSKGVL
Sbjct:   20 PRIATVHRKTGETDVNVTVNLDGTGVCNVSTGVPFLDHMLHQISSHGLIDLDIQATGDIEIDDHHTNEDVGITLGLAFAKALGDRKGIVRFGHFIAPLDEALVQVALDFSGRPHLTYGLEIPTQRVGTYDTQLVREFFVAIVNNSQMTLHLRQLDGINSHHIIEAGFKAFARALRMAVEIDPRRVNTIPSSKGVL 214          
BLAST of Ggra9909.t1 vs. uniprot
Match: A0A0V7ZIA4 (Imidazoleglycerol-phosphate dehydratase n=1 Tax=Mastigocoleus testarum BC008 TaxID=371196 RepID=A0A0V7ZIA4_9CYAN)

HSP 1 Score: 294 bits (752), Expect = 2.140e-97
Identity = 141/195 (72.31%), Postives = 166/195 (85.13%), Query Frame = 0
Query:   82 PRIATVSRTTNETAITLTVNVDGTGVCDVHTGIPFLDHMLAQLCSHGLFDLHVRAKGDLWIDDHHTNEDIAITLGMALSKALADKKGIRRFGHFVAPLDESLVEVVLDFSGRAHCEYSLQIPTQRVGTYDTQLVREFYHAVAGNAQMTLHVIQRSGINSHHIIEASFKSFARAMRMAVEYDPRSINSIPSSKGVL 276
            PRIA+VSRTT ET + +T+N+DGTG C   TGIPFLDHML Q+ SHGLFDL ++AKGD+ IDDHHTNED+ ITLG A++KAL D+KGI RFGHF+APLDESL++VVLDFSGR H  Y L+IPTQRVGTYDTQLVREF+  V  ++QMTLH+ Q  GINSHHIIEA+FK+FARAMRMAVE DPR  ++IPSSKGVL
Sbjct:   19 PRIASVSRTTGETDVQVTINLDGTGHCRAATGIPFLDHMLHQIASHGLFDLDIKAKGDVEIDDHHTNEDVGITLGQAIAKALGDRKGIVRFGHFIAPLDESLIQVVLDFSGRPHITYGLEIPTQRVGTYDTQLVREFFVGVVNHSQMTLHIRQFDGINSHHIIEATFKAFARAMRMAVEIDPRRASTIPSSKGVL 213          
BLAST of Ggra9909.t1 vs. uniprot
Match: K9RCB2 (Imidazoleglycerol-phosphate dehydratase n=3 Tax=Nostocales TaxID=1161 RepID=K9RCB2_9CYAN)

HSP 1 Score: 293 bits (751), Expect = 3.600e-97
Identity = 142/195 (72.82%), Postives = 165/195 (84.62%), Query Frame = 0
Query:   82 PRIATVSRTTNETAITLTVNVDGTGVCDVHTGIPFLDHMLAQLCSHGLFDLHVRAKGDLWIDDHHTNEDIAITLGMALSKALADKKGIRRFGHFVAPLDESLVEVVLDFSGRAHCEYSLQIPTQRVGTYDTQLVREFYHAVAGNAQMTLHVIQRSGINSHHIIEASFKSFARAMRMAVEYDPRSINSIPSSKGVL 276
            PRIATVSRTT ET + +T+N+DGTG C+  TGIPFLDHML Q+ SHGL DL VRA GD+ IDDHHTNED+ ITLG AL+KAL ++KGI RFGHF+APLDE+LV++ LDFSGR H  Y L+IPTQRVGTYDTQLVREF+ AVA N+QMTLH+ Q  GINSHHIIEA+FK+FARAMRMA E DPR  ++IPSSKGVL
Sbjct:   24 PRIATVSRTTGETDVQVTLNLDGTGNCNAQTGIPFLDHMLHQISSHGLIDLDVRATGDIEIDDHHTNEDVGITLGQALAKALGNRKGIVRFGHFIAPLDEALVQIALDFSGRPHLTYGLEIPTQRVGTYDTQLVREFFVAVANNSQMTLHIRQLDGINSHHIIEATFKAFARAMRMATEIDPRRASTIPSSKGVL 218          
BLAST of Ggra9909.t1 vs. uniprot
Match: A0A0C1Y025 (Imidazoleglycerol-phosphate dehydratase n=6 Tax=Cyanobacteria TaxID=1117 RepID=A0A0C1Y025_9CYAN)

HSP 1 Score: 293 bits (749), Expect = 5.890e-97
Identity = 142/194 (73.20%), Postives = 161/194 (82.99%), Query Frame = 0
Query:   83 RIATVSRTTNETAITLTVNVDGTGVCDVHTGIPFLDHMLAQLCSHGLFDLHVRAKGDLWIDDHHTNEDIAITLGMALSKALADKKGIRRFGHFVAPLDESLVEVVLDFSGRAHCEYSLQIPTQRVGTYDTQLVREFYHAVAGNAQMTLHVIQRSGINSHHIIEASFKSFARAMRMAVEYDPRSINSIPSSKGVL 276
            R A+VSRTT ET + +T+N+DGTG CD  TG+PFLDHML Q+ SHGLFDL V AKGD  IDDHHTNED+ ITLGMAL +AL D+KGI RFGHFVAPLDESLV+V LDFSGR H  Y L+IPTQRVGTYDTQLVREF+ AV  ++QMTLH+ Q  GINSHHIIEA+FK+FARAMRMA E DPR  + IPSSKGVL
Sbjct:   19 RTASVSRTTGETDVQVTINIDGTGQCDAQTGVPFLDHMLHQIASHGLFDLTVHAKGDYEIDDHHTNEDVGITLGMALKQALGDRKGIVRFGHFVAPLDESLVQVALDFSGRPHLSYGLEIPTQRVGTYDTQLVREFFVAVVNHSQMTLHIRQLDGINSHHIIEATFKAFARAMRMATEVDPRRASQIPSSKGVL 212          
BLAST of Ggra9909.t1 vs. uniprot
Match: A0A846A098 (Imidazoleglycerol-phosphate dehydratase n=1 Tax=Leptolyngbya sp. SIO4C5 TaxID=2607774 RepID=A0A846A098_9CYAN)

HSP 1 Score: 292 bits (747), Expect = 1.190e-96
Identity = 141/201 (70.15%), Postives = 167/201 (83.08%), Query Frame = 0
Query:   76 SHASRPPRIATVSRTTNETAITLTVNVDGTGVCDVHTGIPFLDHMLAQLCSHGLFDLHVRAKGDLWIDDHHTNEDIAITLGMALSKALADKKGIRRFGHFVAPLDESLVEVVLDFSGRAHCEYSLQIPTQRVGTYDTQLVREFYHAVAGNAQMTLHVIQRSGINSHHIIEASFKSFARAMRMAVEYDPRSINSIPSSKGVL 276
            ++ S P R A++SR T ET + +++N+DGTG C  +TGIPFLDHML Q+ SHGLFDL V+AKGD+ IDDHHTNED+ ITLGMAL +AL D+KGI RFGHFVAPLDESLV+V LDFSGR H  Y L+IPTQRVGTYDTQLVREF+ AV  ++QMTLH+ Q  GINSHHIIEA+FK+FAR+MRMA E DPR  N+IPSSKGVL
Sbjct:   12 ANLSLPSRTASISRKTGETDVQVSLNIDGTGRCTANTGIPFLDHMLHQIASHGLFDLDVQAKGDIEIDDHHTNEDVGITLGMALKEALGDRKGIVRFGHFVAPLDESLVQVALDFSGRPHLSYGLEIPTQRVGTYDTQLVREFFVAVVNHSQMTLHIRQLDGINSHHIIEATFKAFARSMRMAAEVDPRRANTIPSSKGVL 212          
BLAST of Ggra9909.t1 vs. uniprot
Match: K9UJS6 (Imidazoleglycerol-phosphate dehydratase n=2 Tax=Chamaesiphon TaxID=217161 RepID=K9UJS6_CHAP6)

HSP 1 Score: 291 bits (745), Expect = 2.470e-96
Identity = 146/211 (69.19%), Postives = 169/211 (80.09%), Query Frame = 0
Query:   71 THVAPS---HASRPP--RIATVSRTTNETAITLTVNVDGTGVCDVHTGIPFLDHMLAQLCSHGLFDLHVRAKGDLWIDDHHTNEDIAITLGMALSKALADKKGIRRFGHFVAPLDESLVEVVLDFSGRAHCEYSLQIPTQRVGTYDTQLVREFYHAVAGNAQMTLHVIQRSGINSHHIIEASFKSFARAMRMAVEYDPRSINSIPSSKGVL 276
            T +AP     A+ PP  R+ATV R T ET +T+T+++DGTGVC   TG+PFLDHML Q+ SHGLFDLH+ A GD+ IDDHHTNED+ ITLGMAL KAL D+KGI RFGHFVAPLDE+LV+V LDFSGR H  Y L+IPTQRVGTYDTQLVREF+ AV  ++ MTLH+ Q  GINSHHIIEA+FKSFARAMRMA E D R + SIPSSKGVL
Sbjct:    3 TEIAPHLKLAANLPPEHRVATVHRRTGETDVTVTIDLDGTGVCHAQTGVPFLDHMLHQISSHGLFDLHITATGDIEIDDHHTNEDVGITLGMALGKALGDRKGIVRFGHFVAPLDEALVQVALDFSGRPHLSYGLEIPTQRVGTYDTQLVREFFVAVVNHSLMTLHIRQLDGINSHHIIEATFKSFARAMRMATELDLRRMGSIPSSKGVL 213          
The following BLAST results are available for this feature:
BLAST of Ggra9909.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J1Q64.190e-13170.57Imidazoleglycerol-phosphate dehydratase n=1 Tax=Gr... [more]
S0F2Y22.890e-11177.94Imidazoleglycerol-phosphate dehydratase n=1 Tax=Ch... [more]
A0A5J4YYU81.650e-10475.12Imidazoleglycerol-phosphate dehydratase n=1 Tax=Po... [more]
A0A0S3TUP14.560e-9970.44Imidazoleglycerol-phosphate dehydratase n=17 Tax=N... [more]
A0A1J1LFA31.100e-9771.79Imidazoleglycerol-phosphate dehydratase n=2 Tax=Pl... [more]
A0A0V7ZIA42.140e-9772.31Imidazoleglycerol-phosphate dehydratase n=1 Tax=Ma... [more]
K9RCB23.600e-9772.82Imidazoleglycerol-phosphate dehydratase n=3 Tax=No... [more]
A0A0C1Y0255.890e-9773.20Imidazoleglycerol-phosphate dehydratase n=6 Tax=Cy... [more]
A0A846A0981.190e-9670.15Imidazoleglycerol-phosphate dehydratase n=1 Tax=Le... [more]
K9UJS62.470e-9669.19Imidazoleglycerol-phosphate dehydratase n=2 Tax=Ch... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000807Imidazoleglycerol-phosphate dehydratasePFAMPF00475IGPDcoord: 112..255
e-value: 2.4E-60
score: 203.0
IPR000807Imidazoleglycerol-phosphate dehydratasePANTHERPTHR23133IMIDAZOLEGLYCEROL-PHOSPHATE DEHYDRATASE HIS7coord: 76..276
IPR000807Imidazoleglycerol-phosphate dehydrataseHAMAPMF_00076HisBcoord: 83..276
score: 40.160088
IPR000807Imidazoleglycerol-phosphate dehydrataseCDDcd07914IGPDcoord: 85..276
e-value: 4.48958E-114
score: 324.739
IPR038494Imidazole glycerol phosphate dehydratase domain superfamilyGENE3D3.30.230.40Imidazole glycerol phosphate dehydratase; domain 1coord: 70..170
e-value: 2.6E-39
score: 135.2
IPR038494Imidazole glycerol phosphate dehydratase domain superfamilyGENE3D3.30.230.40Imidazole glycerol phosphate dehydratase; domain 1coord: 171..278
e-value: 4.7E-40
score: 137.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 26..82
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 42..71
IPR020565Imidazoleglycerol-phosphate dehydratase, conserved sitePROSITEPS00954IGP_DEHYDRATASE_1coord: 142..155
IPR020565Imidazoleglycerol-phosphate dehydratase, conserved sitePROSITEPS00955IGP_DEHYDRATASE_2coord: 237..249
IPR020568Ribosomal protein S5 domain 2-type foldSUPERFAMILY54211Ribosomal protein S5 domain 2-likecoord: 168..260
IPR020568Ribosomal protein S5 domain 2-type foldSUPERFAMILY54211Ribosomal protein S5 domain 2-likecoord: 83..167

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000887_piloncontigtig00000887_pilon:67318..68184 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra9909.t1Ggra9909.t1Gracilaria gracilis GNS1m malemRNAtig00000887_pilon 67318..68184 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra9909.t1 ID=Ggra9909.t1|Name=Ggra9909.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=289bp
MTAPTGAQMRSAAFCFTPSLPRPWRTRRATTHCRPAPRVAPLCLSSPAPT
PSPPTPSPPTPSPPTPSPPSTHVAPSHASRPPRIATVSRTTNETAITLTV
NVDGTGVCDVHTGIPFLDHMLAQLCSHGLFDLHVRAKGDLWIDDHHTNED
IAITLGMALSKALADKKGIRRFGHFVAPLDESLVEVVLDFSGRAHCEYSL
QIPTQRVGTYDTQLVREFYHAVAGNAQMTLHVIQRSGINSHHIIEASFKS
FARAMRMAVEYDPRSINSIPSSKGVLTDAAALESNPTT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000807ImidazoleglycerolP_deHydtase
IPR038494IGPD_sf
IPR020565ImidazoleglycerP_deHydtase_CS
IPR020568Ribosomal_S5_D2-typ_fold