Ggra9905.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra9905.t1
Unique NameGgra9905.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length122
Homology
BLAST of Ggra9905.t1 vs. uniprot
Match: A0A2V3J1W5 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J1W5_9FLOR)

HSP 1 Score: 191 bits (484), Expect = 9.810e-61
Identity = 103/121 (85.12%), Postives = 109/121 (90.08%), Query Frame = 0
Query:    1 MASRVDQIALHVRKLAQATGVKPNNHNTAKEPSLDGVTSDLDIEALAKSLLDVSKDLDLYLQTLLDPPDLPISNLKSDIAKLQQEMKEKDELLEKSLELVRKSESTFRQLKTRLTGSIYNM 121
            M SRVDQIALHVRKLAQATGVK +  +  K+P LDGVTSDLDIEALAKSLLDVSKDLDLYLQTLLDPPDLPI++LKSDIAKLQQEMKEKDELLEK LELVRK+ESTFRQLK R  G IYNM
Sbjct:    1 MTSRVDQIALHVRKLAQATGVKAHKDDNGKQPFLDGVTSDLDIEALAKSLLDVSKDLDLYLQTLLDPPDLPIASLKSDIAKLQQEMKEKDELLEKCLELVRKTESTFRQLKNRHMGHIYNM 121          
BLAST of Ggra9905.t1 vs. uniprot
Match: R7QPE5 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QPE5_CHOCR)

HSP 1 Score: 140 bits (353), Expect = 9.640e-41
Identity = 69/121 (57.02%), Postives = 100/121 (82.64%), Query Frame = 0
Query:    1 MASRVDQIALHVRKLAQATGVKPNNHNTAKEPSLDGVTSDLDIEALAKSLLDVSKDLDLYLQTLLDPPDLPISNLKSDIAKLQQEMKEKDELLEKSLELVRKSESTFRQLKTRLTGSIYNM 121
            MA+RV++IAL V+KLAQATG++       K+  LDGVTSDLDIEAL+K L+D++KD D+YLQ+LLDPP++P +NLK+DIA L++E++EKDEL+EK++E+++K+E++ R+LK R    IY M
Sbjct:    1 MANRVERIALQVQKLAQATGIEDEKEYHGKDSGLDGVTSDLDIEALSKGLIDITKDFDVYLQSLLDPPNMPTANLKADIAALERELQEKDELIEKNVEMLKKAETSLRKLKRRQYRQIYQM 121          
BLAST of Ggra9905.t1 vs. uniprot
Match: A0A1X6NR01 (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NR01_PORUM)

HSP 1 Score: 58.5 bits (140), Expect = 2.580e-8
Identity = 33/98 (33.67%), Postives = 63/98 (64.29%), Query Frame = 0
Query:    4 RVDQIALHVRKLAQATGVKPNNHNTAKEPSLDGVTSDLDIEALAKSLLDVSKDLDLYLQTLLDPPDLPISNLKSDIAKLQQEMKEKDELLEKSLELVR 101
            R++Q    + +L +A GV   + ++     +DGVTSD+D+EAL KS LD +++ D +L +L+        +L+ +I +L+Q++K+K +L+E++  L+R
Sbjct:    3 RLEQYTRSIGRLLRAAGV---SDDSPPADDVDGVTSDVDVEALMKSTLDATREFDAFLVSLVHEAPPEAISLRQEIDRLEQDLKDKAQLVEQTRALLR 97          
The following BLAST results are available for this feature:
BLAST of Ggra9905.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A2V3J1W59.810e-6185.12Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QPE59.640e-4157.02Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A1X6NR012.580e-833.67Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 72..102
NoneNo IPR availablePFAMPF11594Med28coord: 39..106
e-value: 2.0E-7
score: 31.4

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000887_piloncontigtig00000887_pilon:56786..57276 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra9905.t1Ggra9905.t1Gracilaria gracilis GNS1m malemRNAtig00000887_pilon 56786..57276 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra9905.t1 ID=Ggra9905.t1|Name=Ggra9905.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=122bp
MASRVDQIALHVRKLAQATGVKPNNHNTAKEPSLDGVTSDLDIEALAKSL
LDVSKDLDLYLQTLLDPPDLPISNLKSDIAKLQQEMKEKDELLEKSLELV
RKSESTFRQLKTRLTGSIYNM*
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