Ggra9903.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Ggra9903.t1
Unique Name	Ggra9903.t1
Type	polypeptide
Organism	Gracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length	644

Homology

[Close]

BLAST of Ggra9903.t1 vs. uniprot
Match: A0A2V3J1R7 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J1R7_9FLOR)

HSP 1 Score: 638 bits (1646), Expect = 1.400e-223
Identity = 337/467 (72.16%), Postives = 396/467 (84.80%), Query Frame = 0

Query:  179 MEGDRIGDLQMLKDLAEILQANIARHQTQAESKRSQIKHAQIVAGFVDRRNHVIHIKKVSGKPSTFRSRTTSALKLRAASMRSSSRHPRNGAENKQRIRPEMNQRRCDDLGAQKGKSDFSRLTRKSSAHLRRLHSAGAVLMRKLSKS--PAPTHHAACSPDSAPSSTPVLDPETIKKLKTDPAPIINDFQMELQAIEQEGLLDRAKLDEVESQLDQRRRIHEEAMDILDQFYGALPGWENDPISQKMILETVELTEAGVDAERDLTESRDVFLRAEAALADHQRAHRALQAIRSDLTSFVQILSDLIASADVIVETRGRANTPTRQRRYSLDVQTEAGEGVLDTFSHLERLLDRCIGQSRLAVECCCEAPRVQNLQDDMEQISAGFALEADAVKKNGTIYHDDLEPTLQVSVTALGDCKLAEGFVSERQDLISEDLKPLRNQLERSEEYVMLERLAILDLRHPRDDR 643
            M+GDR+GDL MLK+L E+LQANI R+QT+A SK SQIKHA+IVAG +D R+++IHIKKV+GKP  FR+RT ++ K RAASMRS+SRH R   + K R +    QR CDD G +KG++D+SRLTRKSSAHLRRLHSAGAVL+RKLSKS  PA      C  D     TP+LD ETIK LKT+P PIIN+FQ ELQAIEQE LL+RAKL E ++QL++RR  HEE ++ILDQFYGALPGWE DPISQKMILETVELTEAGVDAERDL E+R+V LRA+AAL+DH+RA RALQAIR DLTSF+QIL DLIASADVIVETR R +T + +RRYS+DVQTEAGEGVLDT   LERLLDRC+GQ+R+AVECC EAPRV++L+DD+EQI+ GF LEA AVKKN TIY+DDLEPTLQVSVTALGDCKLAE FVSER+D+I+ED+KPLR+Q+ER EEYV+LERLAILDLRHPRDDR
Sbjct:    1 MQGDRLGDLHMLKELVELLQANIIRYQTEAVSKCSQIKHAKIVAGILDNRDNIIHIKKVAGKPKYFRARTFNSAKNRAASMRSASRHHRVPCDKKDRNKSSPPQRYCDDPGPKKGRTDYSRLTRKSSAHLRRLHSAGAVLIRKLSKSSVPAQQQPPTCRSDRPTPRTPILDAETIKMLKTNPMPIINEFQQELQAIEQEELLNRAKLQEADAQLNERRETHEEIIEILDQFYGALPGWEQDPISQKMILETVELTEAGVDAERDLIEAREVCLRAKAALSDHERAQRALQAIRVDLTSFIQILRDLIASADVIVETRRRTSTDSSRRRYSVDVQTEAGEGVLDTLCQLERLLDRCVGQARMAVECCSEAPRVESLRDDLEQIATGFGLEAKAVKKNNTIYYDDLEPTLQVSVTALGDCKLAEAFVSERKDMIAEDVKPLRDQVERCEEYVILERLAILDLRHPRDDR 467

The following BLAST results are available for this feature:

BLAST of Ggra9903.t1 vs. uniprot

BLAST of Ggra9903.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A2V3J1R7	1.400e-223	72.16	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 187..214
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 57..81
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 256..296
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 266..296
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..31
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..30
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 322..348

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00000887_pilon	contig	tig00000887_pilon:50518..52449 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria gracilis GNS1m male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Ggra9903.t1	Ggra9903.t1	Gracilaria gracilis GNS1m male	mRNA	tig00000887_pilon 50518..52449 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Ggra9903.t1 ID=Ggra9903.t1|Name=Ggra9903.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=644bp
MMRFAFRARQRKDAVPPAPPDRHAEPPRKKTFAPRLAALNSFSKLGASAN
HSFVSIKPKPSATTPNTNVNNASAQNVIPNARQSSSPLSVLVNYDLHPTR
NHSGHALEYANYTPSRFFVAPTTRTHRRPRHATNASFFSSALALDYDTMA
RRAAPFQPDFLPLHKRIQARIVRLRQLLMEGDRIGDLQMLKDLAEILQAN
IARHQTQAESKRSQIKHAQIVAGFVDRRNHVIHIKKVSGKPSTFRSRTTS
ALKLRAASMRSSSRHPRNGAENKQRIRPEMNQRRCDDLGAQKGKSDFSRL
TRKSSAHLRRLHSAGAVLMRKLSKSPAPTHHAACSPDSAPSSTPVLDPET
IKKLKTDPAPIINDFQMELQAIEQEGLLDRAKLDEVESQLDQRRRIHEEA
MDILDQFYGALPGWENDPISQKMILETVELTEAGVDAERDLTESRDVFLR
AEAALADHQRAHRALQAIRSDLTSFVQILSDLIASADVIVETRGRANTPT
RQRRYSLDVQTEAGEGVLDTFSHLERLLDRCIGQSRLAVECCCEAPRVQN
LQDDMEQISAGFALEADAVKKNGTIYHDDLEPTLQVSVTALGDCKLAEGF
VSERQDLISEDLKPLRNQLERSEEYVMLERLAILDLRHPRDDR*