Ggra9899.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra9899.t1
Unique NameGgra9899.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length362
Homology
BLAST of Ggra9899.t1 vs. uniprot
Match: A0A2V3IME3 (VWFA domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IME3_9FLOR)

HSP 1 Score: 332 bits (851), Expect = 3.680e-108
Identity = 178/363 (49.04%), Postives = 246/363 (67.77%), Query Frame = 0
Query:    3 CALNPMADQNNPCPNGEVPVENVTLVHFRPVEFDLAINLRGYPLDVILLIDASSPSS-RINAIKPELVSLLRRLDGEAKVSVAIYGSEQEFDSSGYSVLASASDDVNRAIQALDRIPQKADGPRTTLTALRSLKSG--GLNLGGFKEVVLLIGDTPGREPECAVGMDRVQTAGDMFSYYSGMVVLPGSLGAPGLDTALPAPQACTN-SPIEPKPVAEGQASYIASKSQGEMIESLTAETMFQAIDRARRTPSRVYQNPPGSQISVSTAKFPSIVGPFNVPEEYQTYSNGCEERVTATLMSVPQFVSAPAQMNAKVKLSLPANACQGGSFSCEVRIVEHHRGYESYSHWSLPSVNYEIVKVNAC 361
            CALNP  +++NPCPNGEVPV+++ L  F  V+F+LAINLRGY  DV+LLID SS +   + AIK EL S +R+L+G AKV VA+YGSE+ +D SG SVL++ +D V+ A++AL+ IP+  DG RTT+TAL++L S   GLNL G K +++LIGD PGREP+C  G +R     DM    S M+ +  SLG+ GL++ALPAP AC N S  +P P+A GQA  I +++ GE++E +TA ++  A+D  RR P   Y  PPGS I VS+A FP   GP+  P   Q YSNGC  +V      +P F+SAPA++ A V ++LP   C  G F+CE+R+VE  RG E  S WS+P  ++E++K++ C
Sbjct:   74 CALNPAVEKDNPCPNGEVPVKSINLTSF--VDFNLAINLRGYSTDVVLLIDTSSSTRPHLKAIKNELSSFVRQLNGSAKVGVAVYGSEESYDESGLSVLSAVTDYVDPALEALESIPETVDGTRTTITALKTLSSSVAGLNLRGNKRIIVLIGDRPGREPDCRNGYNR-----DMVLPSSTMISV--SLGSDGLNSALPAPSACMNGSYYDPSPIAVGQARDIVNRTNGEVVEIVTAASLLWAVDTVRRRPVYWYNRPPGSNIRVSSASFPLYRGPYTPP--VQRYSNGCGNKVYLRTSGLPAFISAPAEVTASVHVALPKGVCIHGPFTCEIRVVEIRRGGEYPSSWSIPFEHFEVIKIHGC 425          
BLAST of Ggra9899.t1 vs. uniprot
Match: A0A2V3IEV7 (VWFA domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IEV7_9FLOR)

HSP 1 Score: 223 bits (569), Expect = 6.650e-67
Identity = 137/350 (39.14%), Postives = 198/350 (56.57%), Query Frame = 0
Query:   22 VENVTLVHFRPVEFDLAINLRGYPLDVILLIDAS-SPSSRINAIKPELVSLLRRLDGEAKVSVAIYGSEQEFDSSGYSVLASASDDVNRAIQALDRIPQKADGPRTTLTALRSL---KSGGLNLGGF--KEVVLLIGDTPGREPECAVGMDRVQTAGDMFSYYSGMV-VLPGSLGAPGLDTALPAPQACTNSPIEPKPVAEGQASYIASKSQGEMIESLTAETMFQAIDRARRTPSRVYQNPPGSQISVSTAKFPSIVGPFNVPEEY---QTYSNGCEERVTATLMSVPQFVSAPAQMNAKVKLSLPANACQGGSFSCEVRIVEHHRGYESYSHWSLPSVNYEIVKVNAC 361
            V NVTL H  P++  L IN+ G   D+++L+DAS S  +++N +K +L S +R L     VSVA YG E +   +GYSV   A+ DVNRA +ALD IP  ADGPRT++TA+ S+   + G + LG F  + +++L+GDTPGREPEC  G+       D  S+ S    V+  +L +PGL+ ALPAP AC    I    + EGQ + +A  S+GE+I  +T+  + ++I + R   +       GS ISV +  +      +  P  +      + GC++RV     ++P F   P QM  K+ LSLPA  CQ G F CEV + E    + SYSHWSLP  +  ++ V AC
Sbjct:    2 VNNVTLRHHFPIDISLDINVPGDTQDIVMLVDASQSTRAKLNNVKEQLKSFVRTLGDVGNVSVAFYGGESDMGETGYSVALKATSDVNRAAEALDNIPIVADGPRTSITAMWSIMQHQDGTIPLGLFANRRIIVLVGDTPGREPECRHGIKS-----DRMSFSSQRTRVMVVNLASPGLNAALPAPAACGY--ITSAAIPEGQGTRLADTSEGELISQVTSSKLRESILKLRMNAANGLHGK-GSHISVLSKTY--TYTEYTCPSSFCARTITTKGCDDRVIIRKSNIPDFAHGPVQMTGKISLSLPAGICQRGPFYCEVEVKERLERF-SYSHWSLPQRHTHLIGVKAC 340          
BLAST of Ggra9899.t1 vs. uniprot
Match: A0A2V3IGT8 (VWFA domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IGT8_9FLOR)

HSP 1 Score: 189 bits (480), Expect = 1.320e-52
Identity = 135/377 (35.81%), Postives = 198/377 (52.52%), Query Frame = 0
Query:    2 ECALNPMADQNNPCPNGEVPVENVTLVHFRPVEFDLAINLRGYPLDVILLIDAS-SPSSRINAIKPELVSLLRRLDGEAKVSVAIYGSEQEFDSSGYSVLASASDDVNRAIQALDRIPQKADGPRTTLTALRSL-----KSGGLNLGGFKE---VVLLIGDTPGREPECA------VGMDRVQTAGDMFSYYSGMVVLPGSLGAPGLDTALPAPQACTNS-PIEPKPVAEGQASYIASKSQGEMIESLTAETMFQAIDRARRTPSRVYQNPPGSQISVSTAKFPSIVGPFNVPEEYQTYSNGCEERVT-ATLMSVPQFVSAPAQMNAKVKLSLPANACQGGSFSCEVRIVEHHRGYESYSHWSLPSVNYEIVKVNAC 361
            +CA++P       CPN E+PVE VTL+  RPVEF+LA NL  Y  DVI L DAS S  S ++A+K +L+  +R +     V + +YGSEQ F ++GYSVL + +     A+QAL  IP   DGPRT++ AL +L       GG+   GF+    + LLIGDTPGRE  C       +  D +   G         ++L  S+G+PGL+ A+ AP    ++ P    P+   QAS I+ +  G+++  +T +T++    + R  P R Y    G  ++V+        G F +P      S+GC ERV  +T +S P  +  P +    ++L+L   AC+ GSF+CEV I +  R             +  IVKVNAC
Sbjct:   67 QCAVDPSISPV--CPNNEIPVEEVTLIPHRPVEFNLAFNLSEYTRDVIFLFDASTSTRSSLDALKNDLIRFIRNVSSTYSVGIGLYGSEQSFGAAGYSVLQTVTPHSEEAVQALHNIPMLPDGPRTSMLALATLIGLRTVEGGIPNFGFRSQERIFLLIGDTPGREVPCDAPSFSDIRHDIINRRGP------SNIILTASIGSPGLNAAISAPPCNYHTIPEALNPIQAEQASDISIRG-GQVMTPVTFDTLYTTYHQIRSYPPRGYFPNWGRAVTVTQNTTSRGFGYFQMPVPIPQ-SDGCNERVILSTPVSWPVPLQFPTKEVGTIQLALAPWACRNGSFTCEVVIKDVRRNIIGTPSSRNFDGHVHIVKVNAC 433          
BLAST of Ggra9899.t1 vs. uniprot
Match: A0A2V3IGI2 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IGI2_9FLOR)

HSP 1 Score: 162 bits (409), Expect = 2.090e-42
Identity = 113/338 (33.43%), Postives = 169/338 (50.00%), Query Frame = 0
Query:    3 CALNPMADQNNPCPNGEVPVENVTLVHFRPVEFDLAINLRGYPLDVILLIDA-SSPSSRINAIKPELVSLLRRLDGEAK-VSVAIYGSEQEFDSSGYSVLASASDDVNRAIQALD---RIPQKADGPRTTLTALRSLKSGGLNLGGFKEVVLLIGDTPGREPECAVGMDRVQTAGDMFSYYSGMV-VLPGSLGAPGLDTALPAPQACTNSPIEPKPVAEGQASYIASKSQGEMIESLTAETMFQAIDRARRTPSRVYQNPPGSQISVSTAKFPSIVGPFNVPEEYQTYSNGCEERVTA-TLMSVPQFVSAPAQMNAKVKLSLPANACQGGSFSCEVRI 333
            C+L      NN CPN E+PV  V +   RP    L IN+    LDVILL+DA SS   RI A+KP++VS +R+L+  A+ + +++ G+E+ FD  G SVL   +++   A+Q+LD   R+P   DGPR +L  L    +  +     +++V+L+GDT GREP C    DR         +  G   V+  S+G PGL+  LP    CT      + V   QAS IA+ +QG  +E   A+T+ Q +    R     +  P G  ISV     P     F  P     + + C+ RV   + M    F++ P +   ++ +SL  + C  G F C V +
Sbjct:   70 CSLKREIAANNSCPNAELPVSTVRVNLNRPTFVSLGINVPRPTLDVILLLDAVSSTRERIIALKPQIVSFIRQLEDVAENIHISVSGTEESFDQRGTSVLQRTTNNFAEAVQSLDEFERLPPIPDGPRASLRFLLPSITNTVGFRSEQQIVVLVGDTSGREPTCV--FDRFDRTSFPSRFSGGQFSVVAVSIGDPGLNAPLPTQAPCTRFTPFVEAVTANQASTIANLTQGAFVEGFDADTLLQTVMNVSRNAPGNFGQPTGFDISV-----PQPFSNFRRP-----FPSVCDGRVQFNSTMGNRFFLAGPLETTVQLSISLANSGCMDGPFQCPVTV 395          
BLAST of Ggra9899.t1 vs. uniprot
Match: A0A2V3IDQ9 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IDQ9_9FLOR)

HSP 1 Score: 124 bits (310), Expect = 2.930e-28
Identity = 107/359 (29.81%), Postives = 163/359 (45.40%), Query Frame = 0
Query:    3 CALNPMADQNNPCPNGEVPVENVTLVHFRPVEFDLAINLRGYPLDVILLIDASSPSSR------INAIKPELVSLLRRLDGEAKVSVAIYGSEQEFDSSG--YSVLASASDDVNRAIQALDRIP--QKADGPRTTLTAL---RSLKSGGLNLGGFKEVVLLIGDTPGREPECAVG-MDRVQTAGDMFSYYSGMVVLPGSLGAPGLDTALPAPQACTNSPI------------EPKPVAEGQASYIASKSQGEMIESLTAETMFQAIDRARRTPSRVYQNPPGSQISVSTAKFPSIVGPFNVPEEYQTYSNGCEERVTATLMSVPQFVSAPAQMNAKVKLSLPANACQGGSFSCEVRIVE 335
            C L+P   + NPCPN E PV +  L    PV F +++NL    L V+ L+DAS PS R      I        ++ ++L   A ++VA+Y  E  F   G  Y  L S + +V+    AL  IP  Q    PRT L A+   R  ++ G      + +V++ GDTPGR+P C     +  +T   +F+ +S   ++  S+G PGLD AL     C  SP             E + VA GQ S + + ++G ++  + A  +F+A  R   +P R ++   G    + TA++            Y T    C  R+     S+P  V A +       ++L  N C GG F C + I E
Sbjct:   62 CTLDPDLARINPCPNNEYPVNDFVLSLSNPVSFRMSVNLLDASLSVLFLVDAS-PSMRDHLPKVITEFSTLATAMTKKLS--AIIAVAVYAGEASFSRYGPPYLPLQSMTSNVSAVRNALQFIPSLQMKTVPRTLLNAIDKARYAQTIGWRGTNARRIVVVAGDTPGRDPTCTKSDYEPARTRFSIFNEFSETALIAASVGQPGLDGALAKLPQCPFSPSCSPVYCTPLPPDEGEQVAAGQLSALVNATKGLLLTGVDASALFRAALRVVNSPGRRFKAIDGVLYRL-TAEY-----------GYDT----CGNRIVIQSPSLPLRVPALSVTTVDFSVALSENGCDGGPFVCHLGIGE 401          
The following BLAST results are available for this feature:
BLAST of Ggra9899.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A2V3IME33.680e-10849.04VWFA domain-containing protein n=1 Tax=Gracilariop... [more]
A0A2V3IEV76.650e-6739.14VWFA domain-containing protein n=1 Tax=Gracilariop... [more]
A0A2V3IGT81.320e-5235.81VWFA domain-containing protein n=1 Tax=Gracilariop... [more]
A0A2V3IGI22.090e-4233.43Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IDQ92.930e-2829.81Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002035von Willebrand factor, type APROSITEPS50234VWFAcoord: 47..189
score: 8.615088
NoneNo IPR availableCDDcd00198vWFAcoord: 46..153
e-value: 6.89556E-5
score: 41.0122
IPR036465von Willebrand factor A-like domain superfamilySUPERFAMILY53300vWA-likecoord: 45..155

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000009_piloncontigtig00000009_pilon:138633..139718 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra9899.t1Ggra9899.t1Gracilaria gracilis GNS1m malemRNAtig00000009_pilon 138633..139718 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra9899.t1 ID=Ggra9899.t1|Name=Ggra9899.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=362bp
MECALNPMADQNNPCPNGEVPVENVTLVHFRPVEFDLAINLRGYPLDVIL
LIDASSPSSRINAIKPELVSLLRRLDGEAKVSVAIYGSEQEFDSSGYSVL
ASASDDVNRAIQALDRIPQKADGPRTTLTALRSLKSGGLNLGGFKEVVLL
IGDTPGREPECAVGMDRVQTAGDMFSYYSGMVVLPGSLGAPGLDTALPAP
QACTNSPIEPKPVAEGQASYIASKSQGEMIESLTAETMFQAIDRARRTPS
RVYQNPPGSQISVSTAKFPSIVGPFNVPEEYQTYSNGCEERVTATLMSVP
QFVSAPAQMNAKVKLSLPANACQGGSFSCEVRIVEHHRGYESYSHWSLPS
VNYEIVKVNAC*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002035VWF_A
IPR036465vWFA_dom_sf