Ggra9899.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra9899.t1
Unique NameGgra9899.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length362
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000009_piloncontigtig00000009_pilon:138633..139718 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra9899Ggra9899Gracilaria gracilis GNS1m malegenetig00000009_pilon 138633..139718 +


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra9899.t1.start1Ggra9899.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000009_pilon 138633..138635 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra9899.t1.CDS1Ggra9899.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000009_pilon 138633..139718 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra9899.t1.exon1Ggra9899.t1.exon1Gracilaria gracilis GNS1m maleexontig00000009_pilon 138633..139718 +


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra9899.t1.stop1Ggra9899.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000009_pilon 139716..139718 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra9899.t1Ggra9899.t1Gracilaria gracilis GNS1m malepolypeptidetig00000009_pilon 138633..139718 +


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra9899.t1 ID=Ggra9899.t1|Name=Ggra9899.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=362bp
MECALNPMADQNNPCPNGEVPVENVTLVHFRPVEFDLAINLRGYPLDVIL
LIDASSPSSRINAIKPELVSLLRRLDGEAKVSVAIYGSEQEFDSSGYSVL
ASASDDVNRAIQALDRIPQKADGPRTTLTALRSLKSGGLNLGGFKEVVLL
IGDTPGREPECAVGMDRVQTAGDMFSYYSGMVVLPGSLGAPGLDTALPAP
QACTNSPIEPKPVAEGQASYIASKSQGEMIESLTAETMFQAIDRARRTPS
RVYQNPPGSQISVSTAKFPSIVGPFNVPEEYQTYSNGCEERVTATLMSVP
QFVSAPAQMNAKVKLSLPANACQGGSFSCEVRIVEHHRGYESYSHWSLPS
VNYEIVKVNAC*
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spliced messenger RNA

>Ggra9899.t1 ID=Ggra9899.t1|Name=Ggra9899.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1086bp|location=Sequence derived from alignment at tig00000009_pilon:138633..139718+ (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGGAATGCGCATTGAATCCAATGGCTGATCAGAACAATCCCTGTCCAAA
TGGTGAAGTTCCTGTGGAAAATGTTACACTCGTACATTTTCGCCCAGTTG
AATTCGATTTGGCAATAAATCTGCGTGGTTATCCTCTTGACGTTATCTTG
CTGATCGACGCCAGTTCTCCGAGCTCTCGGATTAATGCCATTAAGCCGGA
ATTGGTTTCATTACTCAGAAGATTAGACGGAGAAGCGAAGGTTAGTGTTG
CAATCTATGGATCGGAGCAAGAGTTTGACTCATCTGGTTATTCAGTTCTT
GCCTCTGCCTCTGATGATGTGAATCGTGCAATTCAAGCACTTGACCGCAT
TCCTCAAAAGGCTGATGGACCCCGTACGACGTTAACCGCTCTGCGTTCTT
TGAAAAGTGGTGGGCTTAATCTAGGTGGGTTCAAAGAGGTCGTTCTCCTT
ATCGGTGATACCCCTGGAAGAGAACCGGAATGCGCAGTCGGAATGGATCG
GGTCCAGACAGCAGGGGATATGTTCAGTTACTACAGTGGAATGGTGGTAT
TGCCGGGAAGTCTAGGAGCGCCAGGCCTAGATACTGCTCTTCCCGCGCCT
CAAGCGTGTACCAATTCCCCAATCGAACCCAAGCCCGTCGCTGAAGGACA
AGCTAGTTACATAGCCTCAAAAAGCCAAGGCGAGATGATCGAATCTCTCA
CCGCTGAGACGATGTTTCAAGCCATAGATCGCGCTAGAAGAACGCCTAGC
AGGGTTTATCAAAACCCACCTGGAAGCCAGATAAGCGTCAGTACGGCCAA
GTTCCCTTCAATTGTAGGACCATTCAATGTCCCTGAAGAGTACCAAACCT
ACAGCAATGGCTGTGAGGAAAGGGTTACAGCGACTTTAATGAGTGTTCCA
CAATTTGTGAGTGCTCCAGCCCAAATGAACGCCAAAGTCAAGCTCAGCTT
ACCGGCTAATGCTTGTCAAGGAGGATCGTTCTCATGCGAAGTGAGGATTG
TTGAACATCATCGTGGATATGAATCCTATAGCCACTGGTCATTGCCTTCT
GTGAACTATGAAATTGTCAAAGTCAATGCATGTTAA
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protein sequence of Ggra9899.t1

>Ggra9899.t1 ID=Ggra9899.t1|Name=Ggra9899.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=362bp
MECALNPMADQNNPCPNGEVPVENVTLVHFRPVEFDLAINLRGYPLDVIL
LIDASSPSSRINAIKPELVSLLRRLDGEAKVSVAIYGSEQEFDSSGYSVL
ASASDDVNRAIQALDRIPQKADGPRTTLTALRSLKSGGLNLGGFKEVVLL
IGDTPGREPECAVGMDRVQTAGDMFSYYSGMVVLPGSLGAPGLDTALPAP
QACTNSPIEPKPVAEGQASYIASKSQGEMIESLTAETMFQAIDRARRTPS
RVYQNPPGSQISVSTAKFPSIVGPFNVPEEYQTYSNGCEERVTATLMSVP
QFVSAPAQMNAKVKLSLPANACQGGSFSCEVRIVEHHRGYESYSHWSLPS
VNYEIVKVNAC*
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mRNA from alignment at tig00000009_pilon:138633..139718+

Legend: start_codonpolypeptideCDSexonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra9899.t1 ID=Ggra9899.t1|Name=Ggra9899.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1086bp|location=Sequence derived from alignment at tig00000009_pilon:138633..139718+ (Gracilaria gracilis GNS1m male)
ATGGAATGCGCATTGAATCCAATGGCTGATCAGAACAATCCCTGTCCAAA
TGGTGAAGTTCCTGTGGAAAATGTTACACTCGTACATTTTCGCCCAGTTG
AATTCGATTTGGCAATAAATCTGCGTGGTTATCCTCTTGACGTTATCTTG
CTGATCGACGCCAGTTCTCCGAGCTCTCGGATTAATGCCATTAAGCCGGA
ATTGGTTTCATTACTCAGAAGATTAGACGGAGAAGCGAAGGTTAGTGTTG
CAATCTATGGATCGGAGCAAGAGTTTGACTCATCTGGTTATTCAGTTCTT
GCCTCTGCCTCTGATGATGTGAATCGTGCAATTCAAGCACTTGACCGCAT
TCCTCAAAAGGCTGATGGACCCCGTACGACGTTAACCGCTCTGCGTTCTT
TGAAAAGTGGTGGGCTTAATCTAGGTGGGTTCAAAGAGGTCGTTCTCCTT
ATCGGTGATACCCCTGGAAGAGAACCGGAATGCGCAGTCGGAATGGATCG
GGTCCAGACAGCAGGGGATATGTTCAGTTACTACAGTGGAATGGTGGTAT
TGCCGGGAAGTCTAGGAGCGCCAGGCCTAGATACTGCTCTTCCCGCGCCT
CAAGCGTGTACCAATTCCCCAATCGAACCCAAGCCCGTCGCTGAAGGACA
AGCTAGTTACATAGCCTCAAAAAGCCAAGGCGAGATGATCGAATCTCTCA
CCGCTGAGACGATGTTTCAAGCCATAGATCGCGCTAGAAGAACGCCTAGC
AGGGTTTATCAAAACCCACCTGGAAGCCAGATAAGCGTCAGTACGGCCAA
GTTCCCTTCAATTGTAGGACCATTCAATGTCCCTGAAGAGTACCAAACCT
ACAGCAATGGCTGTGAGGAAAGGGTTACAGCGACTTTAATGAGTGTTCCA
CAATTTGTGAGTGCTCCAGCCCAAATGAACGCCAAAGTCAAGCTCAGCTT
ACCGGCTAATGCTTGTCAAGGAGGATCGTTCTCATGCGAAGTGAGGATTG
TTGAACATCATCGTGGATATGAATCCTATAGCCACTGGTCATTGCCTTCT
GTGAACTATGAAATTGTCAAAGTCAATGCATGTTAA
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Coding sequence (CDS) from alignment at tig00000009_pilon:138633..139718+

>Ggra9899.t1 ID=Ggra9899.t1|Name=Ggra9899.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=1086bp|location=Sequence derived from alignment at tig00000009_pilon:138633..139718+ (Gracilaria gracilis GNS1m male)
ATGGAATGCGCATTGAATCCAATGGCTGATCAGAACAATCCCTGTCCAAA
TGGTGAAGTTCCTGTGGAAAATGTTACACTCGTACATTTTCGCCCAGTTG
AATTCGATTTGGCAATAAATCTGCGTGGTTATCCTCTTGACGTTATCTTG
CTGATCGACGCCAGTTCTCCGAGCTCTCGGATTAATGCCATTAAGCCGGA
ATTGGTTTCATTACTCAGAAGATTAGACGGAGAAGCGAAGGTTAGTGTTG
CAATCTATGGATCGGAGCAAGAGTTTGACTCATCTGGTTATTCAGTTCTT
GCCTCTGCCTCTGATGATGTGAATCGTGCAATTCAAGCACTTGACCGCAT
TCCTCAAAAGGCTGATGGACCCCGTACGACGTTAACCGCTCTGCGTTCTT
TGAAAAGTGGTGGGCTTAATCTAGGTGGGTTCAAAGAGGTCGTTCTCCTT
ATCGGTGATACCCCTGGAAGAGAACCGGAATGCGCAGTCGGAATGGATCG
GGTCCAGACAGCAGGGGATATGTTCAGTTACTACAGTGGAATGGTGGTAT
TGCCGGGAAGTCTAGGAGCGCCAGGCCTAGATACTGCTCTTCCCGCGCCT
CAAGCGTGTACCAATTCCCCAATCGAACCCAAGCCCGTCGCTGAAGGACA
AGCTAGTTACATAGCCTCAAAAAGCCAAGGCGAGATGATCGAATCTCTCA
CCGCTGAGACGATGTTTCAAGCCATAGATCGCGCTAGAAGAACGCCTAGC
AGGGTTTATCAAAACCCACCTGGAAGCCAGATAAGCGTCAGTACGGCCAA
GTTCCCTTCAATTGTAGGACCATTCAATGTCCCTGAAGAGTACCAAACCT
ACAGCAATGGCTGTGAGGAAAGGGTTACAGCGACTTTAATGAGTGTTCCA
CAATTTGTGAGTGCTCCAGCCCAAATGAACGCCAAAGTCAAGCTCAGCTT
ACCGGCTAATGCTTGTCAAGGAGGATCGTTCTCATGCGAAGTGAGGATTG
TTGAACATCATCGTGGATATGAATCCTATAGCCACTGGTCATTGCCTTCT
GTGAACTATGAAATTGTCAAAGTCAATGCATGTTAA
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