Ggra9872.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra9872.t1
Unique NameGgra9872.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length307
Homology
BLAST of Ggra9872.t1 vs. uniprot
Match: R7QPX9 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QPX9_CHOCR)

HSP 1 Score: 168 bits (426), Expect = 1.140e-46
Identity = 106/260 (40.77%), Postives = 151/260 (58.08%), Query Frame = 0
Query:   56 PSKDISPK-SKDNKERKSRAGAPNYSAEDVSALLSIVEEVEPTGAGNWAFVALRFSEWALENERPHREQISLRNKFDKLANTKIKACDPACPEIVRRAKGIARVIHNKYASMMMEQGAEEDEQNHRLKPKHDSRGDAEKPDSDIEDAEVLV-----------TRARKRKKGAHGAP-VKLTSEELMINYVG----QMSRHIGTIAKSLTAEMSKSCDKHATHLSKEDINEIVKREVRESMLVTNNILAKMNLMLENISAK 298
            P+    P+ S  ++ + +RAGAPNYS EDV+ALL  VEEVEP G+ +WA VA +F +WA +NERP RE  SLRNKFDKL N+K K  +P+CP+ VRRAKGI R I NK A+M  E  ++E++   R+        + E  D  +    V+V           +  RKRK  A G    +   E+ +  ++      MS HIG I+KS+ +E +      +   +KED+  IVK EVR+SM  TN +L ++N +L+ I +K
Sbjct:   61 PNPSTQPRRSNRSRTKATRAGAPNYSREDVTALLDFVEEVEPLGSNHWAIVARKFRKWAEDNERPEREFESLRNKFDKLCNSKKKTGNPSCPDPVRRAKGIGRAIQNKCAAMKREGSSDEEDNGSRI--------EGESGDGAVSSGAVVVGTEDSCEGTLGSMKRKRKIAATGTRRTRFRGEDAIAGHIAGHIADMSEHIGAISKSIVSEQNVVF--RSLGFTKEDVVTIVKTEVRKSMAPTNAMLHQINNLLQTIVSK 310          
BLAST of Ggra9872.t1 vs. uniprot
Match: B0DTD2 (Predicted protein n=1 Tax=Laccaria bicolor (strain S238N-H82 / ATCC MYA-4686) TaxID=486041 RepID=B0DTD2_LACBS)

HSP 1 Score: 72.4 bits (176), Expect = 2.240e-10
Identity = 42/98 (42.86%), Postives = 51/98 (52.04%), Query Frame = 0
Query:   66 DNKERKSRA-GAPNYSAEDVSALLSIVEEVEPTGAGNWAFVALRFSEWALENERPHREQISLRNKFDKLANTKIKACDPACPEIVRRAKGIARVIHNK 162
            D K+R+ R  G  NYSAEDV ALL I+E+  P G   W   A  F++WA EN RP R   SL  KF +   T     D  CP  + RA  I   I+ K
Sbjct:  155 DTKKRRGRGPGVANYSAEDVDALLDIIEDRLPIGGHAWNSAADEFAQWAEENSRPVRTAKSLEAKFKQFVRTTKPTGDAECPPHIERAHFIEDQINEK 252          
BLAST of Ggra9872.t1 vs. uniprot
Match: A0A425CT26 (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A425CT26_9STRA)

HSP 1 Score: 65.5 bits (158), Expect = 4.600e-9
Identity = 53/173 (30.64%), Postives = 78/173 (45.09%), Query Frame = 0
Query:   70 RKSRAGAPNYSAEDVSALLSIVEEVEPTGAGNWAFVALRFSEWALENERPHREQISLRNKFDKLANTKIKACDPA-CPEIVRRAKGIARVIHNKYASMMMEQGAEEDEQNHRLKPKHDSRGDAEKPDSDIEDAEVLVTRAR-----------KRKKGAHGAPVKLTSEELMIN 230
            RK R  + N+S+E+ + LL +VEE +P G   W  VA  ++     N  P R+ ISLR +F  L N K K    A CP  + RAK +   I +K  +M +    ++ E       + D+  D   P    E  E LV  +R           +R  G  G+  +L S  +M N
Sbjct:    4 RKPRTKSKNFSSEETTRLLDLVEEFKPFGGNMWDRVAFEYNRTGQSNW-PERDGISLRRRFQGL-NNKTKPTGTAYCPPNIERAKRLYSAIESKVGAMELH---DQQEFGDAASERSDAGSDGNIPQEVSEAVEELVVSSRIGTDAAGLLTNRRNSGKRGSASRLISVVVMTN 171          
BLAST of Ggra9872.t1 vs. uniprot
Match: W2PKK7 (Uncharacterized protein n=6 Tax=Phytophthora parasitica TaxID=4792 RepID=W2PKK7_PHYPN)

HSP 1 Score: 62.4 bits (150), Expect = 1.340e-8
Identity = 33/90 (36.67%), Postives = 50/90 (55.56%), Query Frame = 0
Query:   75 GAPNYSAEDVSALLSIVEEVEPTGAGN--WAFVALRFSEWALENERPHREQISLRNKFDKLANTKIKACDPACPEIVRRAKGIARVIHNK 162
            G+ NYS EDV  LL+ +E ++P+GA N  W  V   +  +A    R  R+  S++ K   L N+      P+CP+ VRRA+ I RV+  +
Sbjct:   10 GSENYSKEDVHILLNEIENIQPSGAKNNEWDAVLGNYQIYAERESRVLRDVTSIKKKLQSLLNSTKPTGKPSCPDSVRRARQIQRVLEER 99          
BLAST of Ggra9872.t1 vs. uniprot
Match: A0A425DH01 (Uncharacterized protein n=4 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A425DH01_9STRA)

HSP 1 Score: 58.9 bits (141), Expect = 1.730e-6
Identity = 36/98 (36.73%), Postives = 55/98 (56.12%), Query Frame = 0
Query:   70 RKSRAGAPNYSAEDVSALLSIVEEVEPTGAGNWAFVALRFSEWALENERPHREQISLRNKFDKLANTKIKACDPA-CPEIVRRAKGIARVIHNKYASM 166
            RK R  + N+S+E+ S LL +VEE++P G   W  VA  ++  A  +  P R+ +SL+ +F  L N K K  + + CP  V RAK I   I +K  ++
Sbjct:    4 RKPRTKSKNFSSEETSRLLDLVEELKPFGGNMWERVAFEYNRTA-PSAWPERDGVSLKRRFQGL-NNKTKPTETSYCPPDVDRAKRIYLAIESKVGAI 99          
BLAST of Ggra9872.t1 vs. uniprot
Match: W4F8X7 (Uncharacterized protein n=5 Tax=Aphanomyces astaci TaxID=112090 RepID=W4F8X7_9STRA)

HSP 1 Score: 58.9 bits (141), Expect = 2.170e-6
Identity = 34/97 (35.05%), Postives = 51/97 (52.58%), Query Frame = 0
Query:   70 RKSRAGAPNYSAEDVSALLSIVEEVEPTGAGNWAFVALRFSEWALENERPHREQISLRNKFDKLANTKIKACDPACPEIVRRAKGIARVIHNKYASM 166
            RK R  + N+S+E+ S LL +VEE++P G   W  VA  ++  A  +  P R+ +SL+ +F  L N         CP  V RAK I   I +K  ++
Sbjct:    4 RKPRTKSKNFSSEETSRLLDLVEELKPFGGNMWERVAFEYNRTA-PSAWPERDGVSLKRRFQGLNNKTKPTGTSYCPPDVDRAKRIYLAIESKVGAI 99          
BLAST of Ggra9872.t1 vs. uniprot
Match: A0A7S2ZZA3 (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZZA3_9RHOD)

HSP 1 Score: 58.2 bits (139), Expect = 3.110e-6
Identity = 31/83 (37.35%), Postives = 49/83 (59.04%), Query Frame = 0
Query:   71 KSRAGAPNYSAEDVSALLSIVEEVEPTGAGNWAFVALRFSEWALENERPHREQISLRNKFDKLANTKIKACDPACPEIVRRAK 153
            + RAG PN+S E+++ LL ++E     G   W  VA ++++W+       R   SL+NKFDK+ N+++    P  P+ VRRAK
Sbjct:    7 RGRAGIPNFSDEEINYLLYLIEANASLGLELWPLVASKYAKWSQAQAIYPRSLKSLKNKFDKIVNSRVT---PE-PQYVRRAK 85          
BLAST of Ggra9872.t1 vs. uniprot
Match: A0A3L6VKY5 (Uncharacterized protein n=4 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3L6VKY5_9STRA)

HSP 1 Score: 57.4 bits (137), Expect = 5.010e-6
Identity = 44/141 (31.21%), Postives = 65/141 (46.10%), Query Frame = 0
Query:   70 RKSRAGAPNYSAEDVSALLSIVEEVEPTGAGNWAFVALRFSEWALENERPHREQISLRNKFDKLANTKIKACDPA-CPEIVRRAKGIARVIHNKYASMMMEQGAEEDEQNHRLKPKHDSRGDAEKPDSDIEDAEVLVTRAR 209
            RK R  + N+S+E+ + LL +VEE +P G   W  VA  ++     N  P R+ ISL  +F  L N K K    A CP  + RAK +     +K  +M +    ++ E       + D+  D   P    E  E LV  +R
Sbjct:    4 RKPRTKSKNFSSEETTRLLDLVEEFKPFGGNMWDRVAFEYNRTGQSNW-PERDGISLMRRFQGL-NNKTKPTGTAYCPPNIERAKRLYSATKSKVGAMELH---DQQEFGDAASERSDAGSDGNIPQEVSEAVEELVVSSR 139          
The following BLAST results are available for this feature:
BLAST of Ggra9872.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
R7QPX91.140e-4640.77Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
B0DTD22.240e-1042.86Predicted protein n=1 Tax=Laccaria bicolor (strain... [more]
A0A425CT264.600e-930.64Uncharacterized protein n=1 Tax=Aphanomyces astaci... [more]
W2PKK71.340e-836.67Uncharacterized protein n=6 Tax=Phytophthora paras... [more]
A0A425DH011.730e-636.73Uncharacterized protein n=4 Tax=Aphanomyces astaci... [more]
W4F8X72.170e-635.05Uncharacterized protein n=5 Tax=Aphanomyces astaci... [more]
A0A7S2ZZA33.110e-637.35Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
A0A3L6VKY55.010e-631.21Uncharacterized protein n=4 Tax=Aphanomyces astaci... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 9..31
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 172..198
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 54..77
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..31
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 167..198
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 59..76
NoneNo IPR availablePANTHERPTHR34409FAMILY NOT NAMEDcoord: 74..206

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000170_piloncontigtig00000170_pilon:177121..178041 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra9872.t1Ggra9872.t1Gracilaria gracilis GNS1m malemRNAtig00000170_pilon 177121..178041 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra9872.t1 ID=Ggra9872.t1|Name=Ggra9872.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=307bp
MDAPHIPTVKSPNQPPEQAPSPPQRTCRPIACRPIPPLTLIPLTYPDAAH
AHPVLPSKDISPKSKDNKERKSRAGAPNYSAEDVSALLSIVEEVEPTGAG
NWAFVALRFSEWALENERPHREQISLRNKFDKLANTKIKACDPACPEIVR
RAKGIARVIHNKYASMMMEQGAEEDEQNHRLKPKHDSRGDAEKPDSDIED
AEVLVTRARKRKKGAHGAPVKLTSEELMINYVGQMSRHIGTIAKSLTAEM
SKSCDKHATHLSKEDINEIVKREVRESMLVTNNILAKMNLMLENISAKLN
GPQSGV*
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