Ggra9865.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra9865.t1
Unique NameGgra9865.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length209
Homology
The following BLAST results are available for this feature:
BLAST of Ggra9865.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 35..56
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 57..67
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 68..89
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..34
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 110..134
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 90..109
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 191..208
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 135..167
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 168..190
NoneNo IPR availableTMHMMTMhelixcoord: 168..190
NoneNo IPR availableTMHMMTMhelixcoord: 112..134
NoneNo IPR availableTMHMMTMhelixcoord: 35..57
NoneNo IPR availableTMHMMTMhelixcoord: 70..92

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000170_piloncontigtig00000170_pilon:159485..160111 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra9865.t1Ggra9865.t1Gracilaria gracilis GNS1m malemRNAtig00000170_pilon 159485..160111 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra9865.t1 ID=Ggra9865.t1|Name=Ggra9865.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=209bp
MSDAVLIDLHRPLTQYASPSPPSPPPRPHPFRQHALWAAAALFFSAYLAL
VLYLFLTNGAFRHFVVARANALFALPYVLSLLVVLLCLAPCAPAPPRAQL
DAVITTPADCCLVLLVLLEWATCLALVLVTLIAVHDRLSYVSPDGLIVPV
VQDVPPDAKPADGISRNALIVLLIPLLLMYTLFNFLLHFFSCAQAAWRSR
MGLDDSDV*
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