Ggra9855.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Ggra9855.t1
Unique Name	Ggra9855.t1
Type	polypeptide
Organism	Gracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length	493

Homology

[Close]

BLAST of Ggra9855.t1 vs. uniprot
Match: A0A2V3J5G4 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J5G4_9FLOR)

HSP 1 Score: 387 bits (995), Expect = 4.760e-127
Identity = 262/500 (52.40%), Postives = 330/500 (66.00%), Query Frame = 0

Query:    1 MEHARLDALIHGKQQCVSFRHVSALLSLPARSAQKLLLSYVDSQPAGKLSVLWMVSRADGRTKATKTLLTTSPSATESKQIWAVGPATAATAPSLHAAWIANDAARERELVKKPSHEPNELRDGRFNVLKSSTNAYDQRIDPRLGGDARLMN--KNSVEKKSNSSSFLSRVKSKTKGKKS-KQSPFSFKKP-------TSNTSSTSSLFSSKPLGANSVRKIKAEERATGKEPNNKNKKPSPTPPSARNGSSARTXXXXXXXXXXXXXXXKARKIIVQEDSD--SEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXELIDLQEKVDDEPESPVLQDMDTE-MKDVENVTPEKERKVDDSPNKGKRSYWDTLNHTPVSGRRIRKEVQELVEENGFFVMRRVMKVFDEDGNEVADD--GETEKQRLEQEKKKKTEESNASLRNLFTPVKNKPSSRSKLASTNVKPGKASAATTLPQKKAGKRKGKSIKSYFQKRV 485
            ME A+LDALIHGKQQCVSFRH SALLS+PARSAQKLL SYV SQ A  LSVLW+VS+ D RT   +T LTT+PSAT +KQIWAVGP TAA+APS HA WIA+DA+RER+L KKPSH+PN LRDGRFNV+KSST+  D R+DPRLG  A+L +   N  EKKS  +SFLS V+ K+K KKS KQ+PFSFK         T+  S+ ++LF+SKPLGANS+R I  EERA      ++NK     P SARN  S++                K R++++Q DSD  SE          X                XXXXXXXXXX   +L  +  DEPESP LQ +  E MKDV+   P+ + K  +SPNKGKR++W+ +N  P S +R+RKEV+ELVEENG++V RRV+KVFDE+GNEV +D  G+T+    E  +K K ++S+ SLRNLFTP+K K S R    +   K    +  ++ P K   +RK KSIKSYF+K+V
Sbjct:    1 MEQAKLDALIHGKQQCVSFRHASALLSIPARSAQKLLHSYVQSQRADSLSVLWVVSQRDDRTGTVRTALTTTPSATANKQIWAVGPKTAASAPSQHAVWIADDASRERQLAKKPSHQPNALRDGRFNVVKSSTSVLDSRVDPRLGAHAKLASARNNGNEKKSAPTSFLSLVRGKSKRKKSSKQAPFSFKNAASAIGGDTNGNSTGATLFASKPLGANSIRNISTEERAKAAHKQHENK-----PASARNRISSKPSRSSATNGKRRSIK-KTRRVVIQPDSDDDSEGNESAEEVDEXQEQMKKLQREAAEQERXXXXXXXXXXXXXELNRQDADEPESPQLQHLQDEGMKDVDQA-PKNDDKPVESPNKGKRTFWEAVNEKPASSKRVRKEVEELVEENGYYVTRRVIKVFDENGNEVKEDSDGDTKMDTDETPQKNKVDDSSKSLRNLFTPLKTKNSQR---LANGGKSRDKNTKSSSPTKTTPRRKNKSIKSYFRKKV 490

The following BLAST results are available for this feature:

BLAST of Ggra9855.t1 vs. uniprot

BLAST of Ggra9855.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A2V3J5G4	4.760e-127	52.40	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 275..319
None	No IPR available	COILS	Coil	Coil	coord: 406..433
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 155..169
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 468..484
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 282..358
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 399..428
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 399..492
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 182..204
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 429..459
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 225..243
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 133..369
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 209..224
IPR041913	DNA polymerase delta subunit 3 superfamily	GENE3D	3.90.1030.20	DNA polymerase delta, p66 (Cdc27) subunit, wHTH domain	coord: 3..107 e-value: 7.6E-6 score: 27.8

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00000170_pilon	contig	tig00000170_pilon:139756..141234 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria gracilis GNS1m male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Ggra9855.t1	Ggra9855.t1	Gracilaria gracilis GNS1m male	mRNA	tig00000170_pilon 139756..141234 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Ggra9855.t1 ID=Ggra9855.t1|Name=Ggra9855.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=493bp
MEHARLDALIHGKQQCVSFRHVSALLSLPARSAQKLLLSYVDSQPAGKLS
VLWMVSRADGRTKATKTLLTTSPSATESKQIWAVGPATAATAPSLHAAWI
ANDAARERELVKKPSHEPNELRDGRFNVLKSSTNAYDQRIDPRLGGDARL
MNKNSVEKKSNSSSFLSRVKSKTKGKKSKQSPFSFKKPTSNTSSTSSLFS
SKPLGANSVRKIKAEERATGKEPNNKNKKPSPTPPSARNGSSARTAKAGG
EDRRKKKPAKKARKIIVQEDSDSEDKESDEEIDAEQLRIMELEQEAAEEE
RAAAERAELERELIDLQEKVDDEPESPVLQDMDTEMKDVENVTPEKERKV
DDSPNKGKRSYWDTLNHTPVSGRRIRKEVQELVEENGFFVMRRVMKVFDE
DGNEVADDGETEKQRLEQEKKKKTEESNASLRNLFTPVKNKPSSRSKLAS
TNVKPGKASAATTLPQKKAGKRKGKSIKSYFQKRVYKHSAHE*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR041913	POLD3_sf