Ggra9848.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra9848.t1
Unique NameGgra9848.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length129
Homology
[Close]
BLAST of Ggra9848.t1 vs. uniprot
Match: A0A2V3IIJ3 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IIJ3_9FLOR)

HSP 1 Score: 71.6 bits (174), Expect = 6.150e-13
Identity = 43/124 (34.68%), Postives = 66/124 (53.23%), Query Frame = 0 
Query:    4 SLASKDHLFYMQSLTNEQLLAVSQSAPAPIRKNLTSSATQQELLAKVFRIRELEIAAKHPVIGSNAATSLKTLIHMSASDILKASQEQPQNLLQLMTDALSADPSLLPRNIRANNPSEAAAIAI 127
            SL SK+ ++Y+ +L  +QL  + QSAP  +R   +   T+ +LLA +FR+R+ E A             L+ L+  S   + K + + P  L ++M  AL AD +L PR I   NP EA  +AI
Sbjct:   22 SLMSKEPIYYLTTLNEQQLQMIVQSAPPHLRTTFSDPPTKPQLLADLFRLRQAEAAMSSD--PQAVMQDLEKLLSTSQDGLRKMTNDDPNELKRMMNSALKADATLSPREI-PENPLEAGMVAI 142
The following BLAST results are available for this feature:
BLAST of Ggra9848.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IIJ36.150e-1334.68Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000170_piloncontigtig00000170_pilon:69315..69701 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra9848.t1Ggra9848.t1Gracilaria gracilis GNS1m malemRNAtig00000170_pilon 69315..69701 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra9848.t1 ID=Ggra9848.t1|Name=Ggra9848.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=129bp
MVWSLASKDHLFYMQSLTNEQLLAVSQSAPAPIRKNLTSSATQQELLAKV
FRIRELEIAAKHPVIGSNAATSLKTLIHMSASDILKASQEQPQNLLQLMT
DALSADPSLLPRNIRANNPSEAAAIAIS*
back to top