Ggra9848.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra9848.t1
Unique NameGgra9848.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length129
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000170_piloncontigtig00000170_pilon:69315..69701 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra9848Ggra9848Gracilaria gracilis GNS1m malegenetig00000170_pilon 69315..69701 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra9848.t1.stop1Ggra9848.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000170_pilon 69315..69317 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra9848.t1.CDS1Ggra9848.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000170_pilon 69315..69701 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra9848.t1.exon1Ggra9848.t1.exon1Gracilaria gracilis GNS1m maleexontig00000170_pilon 69315..69701 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra9848.t1.start1Ggra9848.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000170_pilon 69699..69701 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra9848.t1Ggra9848.t1Gracilaria gracilis GNS1m malepolypeptidetig00000170_pilon 69315..69701 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra9848.t1 ID=Ggra9848.t1|Name=Ggra9848.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=129bp
MVWSLASKDHLFYMQSLTNEQLLAVSQSAPAPIRKNLTSSATQQELLAKV
FRIRELEIAAKHPVIGSNAATSLKTLIHMSASDILKASQEQPQNLLQLMT
DALSADPSLLPRNIRANNPSEAAAIAIS*
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spliced messenger RNA

>Ggra9848.t1 ID=Ggra9848.t1|Name=Ggra9848.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=387bp|location=Sequence derived from alignment at tig00000170_pilon:69315..69701- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGGTATGGTCCCTTGCATCCAAAGACCATTTGTTCTACATGCAATCTCT
CACGAATGAGCAACTTCTGGCCGTCTCACAAAGTGCCCCAGCACCCATTC
GCAAAAACCTGACCTCATCCGCCACTCAGCAGGAGCTGCTTGCAAAGGTT
TTTCGTATCCGTGAACTAGAGATCGCCGCGAAGCATCCCGTGATTGGATC
AAACGCAGCGACAAGCCTGAAAACGCTCATACACATGTCCGCCTCTGATA
TACTTAAAGCGTCTCAAGAGCAGCCACAGAATCTTCTACAGCTCATGACT
GACGCTCTATCAGCCGATCCCAGTCTTTTGCCAAGAAATATTCGAGCGAA
CAACCCGTCAGAAGCTGCGGCTATCGCCATCAGTTAG
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protein sequence of Ggra9848.t1

>Ggra9848.t1 ID=Ggra9848.t1|Name=Ggra9848.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=129bp
MVWSLASKDHLFYMQSLTNEQLLAVSQSAPAPIRKNLTSSATQQELLAKV
FRIRELEIAAKHPVIGSNAATSLKTLIHMSASDILKASQEQPQNLLQLMT
DALSADPSLLPRNIRANNPSEAAAIAIS*
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mRNA from alignment at tig00000170_pilon:69315..69701-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra9848.t1 ID=Ggra9848.t1|Name=Ggra9848.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=387bp|location=Sequence derived from alignment at tig00000170_pilon:69315..69701- (Gracilaria gracilis GNS1m male)
ATGGTATGGTCCCTTGCATCCAAAGACCATTTGTTCTACATGCAATCTCT CACGAATGAGCAACTTCTGGCCGTCTCACAAAGTGCCCCAGCACCCATTC GCAAAAACCTGACCTCATCCGCCACTCAGCAGGAGCTGCTTGCAAAGGTT TTTCGTATCCGTGAACTAGAGATCGCCGCGAAGCATCCCGTGATTGGATC AAACGCAGCGACAAGCCTGAAAACGCTCATACACATGTCCGCCTCTGATA TACTTAAAGCGTCTCAAGAGCAGCCACAGAATCTTCTACAGCTCATGACT GACGCTCTATCAGCCGATCCCAGTCTTTTGCCAAGAAATATTCGAGCGAA CAACCCGTCAGAAGCTGCGGCTATCGCCATCAGTTAG
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Coding sequence (CDS) from alignment at tig00000170_pilon:69315..69701-

>Ggra9848.t1 ID=Ggra9848.t1|Name=Ggra9848.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=387bp|location=Sequence derived from alignment at tig00000170_pilon:69315..69701- (Gracilaria gracilis GNS1m male)
ATGGTATGGTCCCTTGCATCCAAAGACCATTTGTTCTACATGCAATCTCT
CACGAATGAGCAACTTCTGGCCGTCTCACAAAGTGCCCCAGCACCCATTC
GCAAAAACCTGACCTCATCCGCCACTCAGCAGGAGCTGCTTGCAAAGGTT
TTTCGTATCCGTGAACTAGAGATCGCCGCGAAGCATCCCGTGATTGGATC
AAACGCAGCGACAAGCCTGAAAACGCTCATACACATGTCCGCCTCTGATA
TACTTAAAGCGTCTCAAGAGCAGCCACAGAATCTTCTACAGCTCATGACT
GACGCTCTATCAGCCGATCCCAGTCTTTTGCCAAGAAATATTCGAGCGAA
CAACCCGTCAGAAGCTGCGGCTATCGCCATCAGTTAG
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