Ggra9836.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra9836.t1
Unique NameGgra9836.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length154
Homology
BLAST of Ggra9836.t1 vs. uniprot
Match: A0A2V3IJH2 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IJH2_9FLOR)

HSP 1 Score: 148 bits (373), Expect = 1.330e-38
Identity = 82/155 (52.90%), Postives = 107/155 (69.03%), Query Frame = 0
Query:    1 MAMSRSRNSVGPLTSTLSIAGILERSASWWSVLRCLGIMKSLDSSLSFRKNLITGRERAPQGAFQTVDLANTVVTIQIDNFDIHPLHSVKASGKSLPITNGTVTQSIIRNEKRRRVEDSKEVPEADE--KDPQICDWINPLDVFANRKQFAASFN 153
            M MSRSR  VGPLT+ LSIAGI+E +ASW SVL  LG++ S D + +FR+ LI+ RE+A +GAF +V L + +VT+Q+DN D+ P+H+VKA G+SLPI  GT TQ II+  KR+RV DS E     E  KD     W+ P D+F +R   AASFN
Sbjct:  351 MVMSRSRVCVGPLTTMLSIAGIIEFTASWRSVLHALGLVTSYDRAETFRRRLISKREQAERGAFDSVRLEDRIVTVQLDNVDMLPVHNVKAFGESLPILIGTATQGIIQCRKRKRVNDSTETSTMTENRKDVNPNKWLRPKDIFKDRVSSAASFN 505          
BLAST of Ggra9836.t1 vs. uniprot
Match: A0A2V3IY08 (Uncharacterized protein n=3 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IY08_9FLOR)

HSP 1 Score: 134 bits (336), Expect = 2.110e-33
Identity = 71/157 (45.22%), Postives = 105/157 (66.88%), Query Frame = 0
Query:    1 MAMSRSRNSVGPLTSTLSIAGILERSASWWSVLRCLGIMKSLDSSLSFRKNLITGRERAPQGAFQTVDLANTVVTIQIDNFDIHPLHSVKASGKSLPITNGTVTQSIIRNEKRRRVEDSKEVPEADEKDPQICD----WINPLDVFANRKQFAASFN 153
            M  S+SR  +GPLT TLSIAGI E S SW SVL  LG+  S D+  SF+K+LI  RE++ +GAF+ V+  + +V+IQ+DNFDI P HS+KASGK+LP+ +GT TQ I+++ KR ++  +  +  + E+   + +    W +P  V  +R  F++SFN
Sbjct:  538 MTYSQSRLRIGPLTMTLSIAGIAESSPSWTSVLHSLGLATSYDAMESFKKSLIAKREQSTRGAFEGVNTTDRLVSIQLDNFDILPFHSMKASGKALPMVSGTATQGIVQSRKRPKLHSAVGINRSTEEPGALVEADTSWRSPSTVLVDRATFSSSFN 694          
BLAST of Ggra9836.t1 vs. uniprot
Match: A0A2V3IKL7 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IKL7_9FLOR)

HSP 1 Score: 102 bits (255), Expect = 1.540e-22
Identity = 56/148 (37.84%), Postives = 83/148 (56.08%), Query Frame = 0
Query:    1 MAMSRSRNSVGPLTSTLSIAGILERSASWWSVLRCLGIMKSLDSSLSFRKNLITGRERAPQGAFQTVDLANTVVTIQIDNFDIHPLHSVKASGKSLPITNGTVTQSIIRNEKRRRVEDSKEVPEADEKDPQICDWINPLDVFANRKQF 148
            +A SR+ +  GP+T+ +SIA ILE + SW S L  LGI  S D+   ++  L +  E AP+ A   V L++ ++T+QIDN+D+ PLHSVK +GK  P+ +GT TQ ++R  +     D     E   K      W +P  V   R+ F
Sbjct:   51 VAFSRTESCAGPITTCMSIADILENTPSWTSFLNALGIKTSYDTLERYKNRLASDHESAPRRALSDVPLSDGLLTVQIDNYDVMPLHSVKIAGKKNPVISGTATQGVLRKRRWGATRD-----ENFSKFTTYSQWQDPKRVLGTRENF 193          
The following BLAST results are available for this feature:
BLAST of Ggra9836.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A2V3IJH21.330e-3852.90Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IY082.110e-3345.22Uncharacterized protein n=3 Tax=Gracilariopsis cho... [more]
A0A2V3IKL71.540e-2237.84Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 13..23
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 24..27
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..27
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..12
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 28..153

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000170_piloncontigtig00000170_pilon:13758..14219 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra9836.t1Ggra9836.t1Gracilaria gracilis GNS1m malemRNAtig00000170_pilon 13758..14219 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra9836.t1 ID=Ggra9836.t1|Name=Ggra9836.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=154bp
MAMSRSRNSVGPLTSTLSIAGILERSASWWSVLRCLGIMKSLDSSLSFRK
NLITGRERAPQGAFQTVDLANTVVTIQIDNFDIHPLHSVKASGKSLPITN
GTVTQSIIRNEKRRRVEDSKEVPEADEKDPQICDWINPLDVFANRKQFAA
SFN*
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