Ggra9836.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra9836.t1
Unique NameGgra9836.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length154
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000170_piloncontigtig00000170_pilon:13758..14219 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra9836Ggra9836Gracilaria gracilis GNS1m malegenetig00000170_pilon 13758..14219 +


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra9836.t1.start1Ggra9836.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000170_pilon 13758..13760 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra9836.t1.CDS1Ggra9836.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000170_pilon 13758..14219 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra9836.t1.exon1Ggra9836.t1.exon1Gracilaria gracilis GNS1m maleexontig00000170_pilon 13758..14219 +


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra9836.t1.stop1Ggra9836.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000170_pilon 14217..14219 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra9836.t1Ggra9836.t1Gracilaria gracilis GNS1m malepolypeptidetig00000170_pilon 13758..14219 +


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra9836.t1 ID=Ggra9836.t1|Name=Ggra9836.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=154bp
MAMSRSRNSVGPLTSTLSIAGILERSASWWSVLRCLGIMKSLDSSLSFRK
NLITGRERAPQGAFQTVDLANTVVTIQIDNFDIHPLHSVKASGKSLPITN
GTVTQSIIRNEKRRRVEDSKEVPEADEKDPQICDWINPLDVFANRKQFAA
SFN*
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spliced messenger RNA

>Ggra9836.t1 ID=Ggra9836.t1|Name=Ggra9836.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=462bp|location=Sequence derived from alignment at tig00000170_pilon:13758..14219+ (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGGCCATGTCTCGATCCCGCAATTCCGTTGGTCCGCTGACGAGCACCTT
GTCCATTGCAGGAATTCTCGAGCGCAGTGCATCATGGTGGAGCGTGCTAC
GCTGTTTAGGGATCATGAAATCACTGGATAGCAGTCTTTCCTTTCGGAAG
AACCTCATTACGGGGAGAGAAAGAGCACCACAAGGTGCTTTTCAAACTGT
CGATCTTGCGAATACCGTTGTCACAATACAAATCGATAACTTCGACATAC
ATCCGCTGCACAGTGTTAAGGCTTCGGGAAAGTCTTTGCCAATAACTAAC
GGTACTGTGACGCAAAGCATAATTCGTAACGAAAAGAGAAGGCGAGTGGA
AGATTCCAAAGAAGTTCCTGAAGCCGATGAAAAAGATCCACAGATATGCG
ACTGGATTAATCCCCTTGACGTTTTCGCAAATCGCAAACAATTCGCAGCT
TCGTTCAATTGA
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protein sequence of Ggra9836.t1

>Ggra9836.t1 ID=Ggra9836.t1|Name=Ggra9836.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=154bp
MAMSRSRNSVGPLTSTLSIAGILERSASWWSVLRCLGIMKSLDSSLSFRK
NLITGRERAPQGAFQTVDLANTVVTIQIDNFDIHPLHSVKASGKSLPITN
GTVTQSIIRNEKRRRVEDSKEVPEADEKDPQICDWINPLDVFANRKQFAA
SFN*
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mRNA from alignment at tig00000170_pilon:13758..14219+

Legend: start_codonpolypeptideCDSexonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra9836.t1 ID=Ggra9836.t1|Name=Ggra9836.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=462bp|location=Sequence derived from alignment at tig00000170_pilon:13758..14219+ (Gracilaria gracilis GNS1m male)
ATGGCCATGTCTCGATCCCGCAATTCCGTTGGTCCGCTGACGAGCACCTT
GTCCATTGCAGGAATTCTCGAGCGCAGTGCATCATGGTGGAGCGTGCTAC
GCTGTTTAGGGATCATGAAATCACTGGATAGCAGTCTTTCCTTTCGGAAG
AACCTCATTACGGGGAGAGAAAGAGCACCACAAGGTGCTTTTCAAACTGT
CGATCTTGCGAATACCGTTGTCACAATACAAATCGATAACTTCGACATAC
ATCCGCTGCACAGTGTTAAGGCTTCGGGAAAGTCTTTGCCAATAACTAAC
GGTACTGTGACGCAAAGCATAATTCGTAACGAAAAGAGAAGGCGAGTGGA
AGATTCCAAAGAAGTTCCTGAAGCCGATGAAAAAGATCCACAGATATGCG
ACTGGATTAATCCCCTTGACGTTTTCGCAAATCGCAAACAATTCGCAGCT
TCGTTCAATTGA
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Coding sequence (CDS) from alignment at tig00000170_pilon:13758..14219+

>Ggra9836.t1 ID=Ggra9836.t1|Name=Ggra9836.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=462bp|location=Sequence derived from alignment at tig00000170_pilon:13758..14219+ (Gracilaria gracilis GNS1m male)
ATGGCCATGTCTCGATCCCGCAATTCCGTTGGTCCGCTGACGAGCACCTT
GTCCATTGCAGGAATTCTCGAGCGCAGTGCATCATGGTGGAGCGTGCTAC
GCTGTTTAGGGATCATGAAATCACTGGATAGCAGTCTTTCCTTTCGGAAG
AACCTCATTACGGGGAGAGAAAGAGCACCACAAGGTGCTTTTCAAACTGT
CGATCTTGCGAATACCGTTGTCACAATACAAATCGATAACTTCGACATAC
ATCCGCTGCACAGTGTTAAGGCTTCGGGAAAGTCTTTGCCAATAACTAAC
GGTACTGTGACGCAAAGCATAATTCGTAACGAAAAGAGAAGGCGAGTGGA
AGATTCCAAAGAAGTTCCTGAAGCCGATGAAAAAGATCCACAGATATGCG
ACTGGATTAATCCCCTTGACGTTTTCGCAAATCGCAAACAATTCGCAGCT
TCGTTCAATTGA
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