Ggra9829.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra9829.t1
Unique NameGgra9829.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length596
Homology
BLAST of Ggra9829.t1 vs. uniprot
Match: A0A2V3ITQ7 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ITQ7_9FLOR)

HSP 1 Score: 201 bits (510), Expect = 3.040e-53
Identity = 221/575 (38.43%), Postives = 319/575 (55.48%), Query Frame = 0
Query:   31 LVELATLLLYNEHVTQDVPRALQLLERSIAQYDISEAFYHLISYFRAHGNRAQKRRVIPLLEVSVYRFPDPDFVYLLGCVLYSGDTGEMDVQRGVQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMLRLADFYAYGTFSLKPCMRCAKKWYERAIEEGNLPKAKMGLANVLTNAVHQQHQDSVRAHNLLEEVLSQAPSKEILLQLGNFYSEDKHLSNYPRSKEMYQRAMDEFDCRTSMMFLLGLYILGHTDVPPDHYAALQFCTLQYERTKDSAVLYMLVSLLWSGSEQVPPDRGRAYQLCKDERNDT---HAVQASLLRYGAEGVMEADSKLARTICDGKISVNAR---LTYAIILSES--SSRRDLKRAEQMLRRIVNEG--DTFYAWMPLTLRRGTYELPVGGDPTRLLRCMKRVTNCSSLAALNLASLLLEKAD----GRDDCIHFIRYLVNETKEVLVASLNLAYLFLEGLATTLKDPKRAVAVLEDALEENSDMSARAMLAGALVACGEDWERSVA-----LWKGVKEECADDEEEFVKIRQLISDE 586
            ++ LA LL+Y+E   +D  R +Q+LER+I Q     A Y L  Y+   G+R+Q  + + LLE S+++  DP  ++LL   + SG     ++     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   L   +A G     P  R A KW+ RAIE GNLP AK  LA +LT    +   D  RA  LLEEV+ +   +  +LQL   YS    + NYPR+  +  RA+ EF+   +   L  +   G   VP     AL      YE+  D   +  L  +LWSG+E++P D  R+  LCK     T   + V AS+LRYGA   +  + K A TIC+ + + +     L +AI+LSE   S+  D+  A ++ R +  +     ++ W+PL+LR  + +LP+ G+   +   +KR    + +A LNLASLL+E         ++ +  +  L++ T+   +A+LNL YL    +    +D +RA A+ E A EE++++  + +LA AL   G D E S A     LW+ V E+      E  ++  ++SD+
Sbjct:    1 MIALANLLMYSEDY-RDEERGIQMLERAIKQAGSPLAMYRLARYYLDFGSRSQYHKAVALLERSLHQSEDPAVLHLLSFAVASGLGVRRNIPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNALGVVFADGAPHFPPNARRAVKWFNRAIEVGNLPSAKHNLAVILTQTHDKVMPDPSRAALLLEEVVEETGKQGAILQLAELYSNWLSVLNYPRAVTLLTRAVHEFNSYPARFSLARMLAFGE-GVPAQRATALGLFERHYEKVHDIGSMLNLSEMLWSGTEELPADMERSVSLCKQLCRKTDIGNYVLASMLRYGAP-TLPRNLKQAITICEREKADDDHFIMLVHAILLSEDPESNDSDISHAIELFRALSVDTPLQMWWVWLPLSLRTSSVDLPIHGNEHCITESVKRYEEVNVIAKLNLASLLVEDRSPTLQDSEEAVQLLESLID-TRIGDLAALNLGYLLWNEVGGIPQDKERARALFERATEEDNNLVGKVLLANALSE-GIDEEVSDADQVAELWRSV-EDANKTNAEVSRLSSMLSDQ 569          
BLAST of Ggra9829.t1 vs. uniprot
Match: A0A2V3IWI3 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IWI3_9FLOR)

HSP 1 Score: 137 bits (346), Expect = 1.100e-30
Identity = 125/419 (29.83%), Postives = 185/419 (44.15%), Query Frame = 0
Query:  178 MLRLADFYAYGTFSLKPCMRCAKKWYERAIEEGNLPKAKMGLANVLTNAVHQQHQDSVRAHNLLEEVLSQAPSKEILLQLGNFYSEDKHLSNYPRSKEMYQRAMDEFDCRTSMMFLLGLYILGHTDVPPDHYAALQFCTLQYERTKDSAVLYMLVSLLWSGSEQVPPDRGRAYQLCKDE-RNDTHA--VQASLLRYGAEGVM-----EADSKLARTICDGK--ISVNARLTYAIILSESSSRRD--LKRAEQMLRRIV---NEGDTFYAWMPLTLRRGTYELPVGGDPTRLLRCMKRVTNCSSLAALNLASLLLEK----ADGRD--DCIHFIRYLVNETKEVLVASLNLAYLFLEGLATTLKDPKRAVAVLEDALEENSDMSARAMLAGALVAC-GEDWERSVALWKGVKEECADDEE 574
            M  L   Y YG   +KP +R A+ WYERA++    P A+  LA++L N+ H    D  RA  LL                                         +FD   +M  L    + G   + P+   AL+  +  Y RT D ++  +L  +LWSG+    PDR RA QLC+   +ND +A    AS+LRYG    +     EA   L    CD    + V   +  AI+LSE+ S     L+R  +M    V   ++ D +  W+PL LRR + +LPV G P R+   +    +   ++ LNL+SLLLE      D +D    +  +   V +    L+  +NLAY+   G+    K P RA+ ++E  +  +    AR  L+  L     +D  R+V LWK V     D EE
Sbjct:  196 MNNLGILYHYGEPPIKPNLRRARMWYERALKRAQFPYAQARLASILANSSHAD--DIFRATRLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQFDSTDAMEALSNSLLSGRPGLHPNPCEALRLLSDVYNRTHDKSLRPLLAEVLWSGTATHAPDRTRALQLCRKALKNDVNANTSMASMLRYGHPPSLQPCPTEALRLLELIPCDRTQHVYVWKNMVLAILLSETDSPYPCLLRRVYEMFHEGVQSTDDSDYWLLWLPLHLRRSSLQLPVSGCPHRITHAVMVEDDLRVVSILNLSSLLLESHNILPDNKDAETALSLLECGVKKFNNHLIR-INLAYVLWYGIGAVEKQPLRAIQLVEGVMIRSPHQLARTFLSCMLAERHADDLPRAVELWKQVTRSVRDVEE 611          
The following BLAST results are available for this feature:
BLAST of Ggra9829.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3ITQ73.040e-5338.43Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IWI31.100e-3029.83Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006597Sel1-like repeatSMARTSM00671sel1coord: 175..211
e-value: 74.0
score: 6.1
coord: 500..536
e-value: 9.4
score: 13.9
coord: 101..136
e-value: 82.0
score: 5.7
coord: 138..173
e-value: 58.0
score: 7.0
coord: 28..63
e-value: 1.6
score: 17.8
coord: 251..285
e-value: 280.0
score: 1.0
IPR006597Sel1-like repeatPFAMPF08238Sel1coord: 178..211
e-value: 0.65
score: 10.8
coord: 105..134
e-value: 7.4
score: 7.4
coord: 154..171
e-value: 88.0
score: 4.0
coord: 502..525
e-value: 9.0
score: 7.1
coord: 30..61
e-value: 28.0
score: 5.6
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 9..433
e-value: 5.3E-31
score: 109.6
NoneNo IPR availableSUPERFAMILY81901HCP-likecoord: 152..333
NoneNo IPR availableSUPERFAMILY81901HCP-likecoord: 25..210

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000160_piloncontigtig00000160_pilon:119063..120850 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra9829.t1Ggra9829.t1Gracilaria gracilis GNS1m malemRNAtig00000160_pilon 119063..120850 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra9829.t1 ID=Ggra9829.t1|Name=Ggra9829.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=596bp
MPQPAAVSVAKRIHVLERDIKLDNFNSGDALVELATLLLYNEHVTQDVPR
ALQLLERSIAQYDISEAFYHLISYFRAHGNRAQKRRVIPLLEVSVYRFPD
PDFVYLLGCVLYSGDTGEMDVQRGVQLLERAVRMDQNPQHMETLASILLR
DASVGGDKKRALRMYKQAVRLSNNAWRMLRLADFYAYGTFSLKPCMRCAK
KWYERAIEEGNLPKAKMGLANVLTNAVHQQHQDSVRAHNLLEEVLSQAPS
KEILLQLGNFYSEDKHLSNYPRSKEMYQRAMDEFDCRTSMMFLLGLYILG
HTDVPPDHYAALQFCTLQYERTKDSAVLYMLVSLLWSGSEQVPPDRGRAY
QLCKDERNDTHAVQASLLRYGAEGVMEADSKLARTICDGKISVNARLTYA
IILSESSSRRDLKRAEQMLRRIVNEGDTFYAWMPLTLRRGTYELPVGGDP
TRLLRCMKRVTNCSSLAALNLASLLLEKADGRDDCIHFIRYLVNETKEVL
VASLNLAYLFLEGLATTLKDPKRAVAVLEDALEENSDMSARAMLAGALVA
CGEDWERSVALWKGVKEECADDEEEFVKIRQLISDETLRRLEDET*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006597Sel1-like
IPR011990TPR-like_helical_dom_sf