Ggra9822.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra9822.t1
Unique NameGgra9822.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length471
Homology
BLAST of Ggra9822.t1 vs. uniprot
Match: A0A2V3IS94 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IS94_9FLOR)

HSP 1 Score: 271 bits (694), Expect = 2.130e-82
Identity = 151/354 (42.66%), Postives = 222/354 (62.71%), Query Frame = 0
Query:  106 GVPRPRVKRYRLITPIAIRFTVLLLELGAIYSSSNIAANVLAGRSFNVRLTERNQPFNATDARNSQCDEFIENARGVEQSGTVLLCIDSEENRDLTNR-HENTSVFFRFDPNENNMEYVVEDKFVMTTSVYARVLINLISDDDVQLAPLRPDLPVDNNYSKSVVQGVMNRAMQKLGFEVRIDQIRESVDEENVIKYEYDRFFDSSTREEIRDSLLSELQQFTLDLNVTQPGEEDVLYTFKRDRGYFRHENAVIAVVGKNRLAQGWLMIAWVGLLVVRLIAQRFFTVFDELAYPAVKKVHGADLSVGPLAKVEKRETLYISKFSDGRVGHIGYRAANERQDRVPNFYGCDIVLGS 458
            GVP P+++  +L+ P+ IRFT+L L+L AIYSSS    +V    +FN+ L+   +P  +       C  +I++ RGVEQ+G VLLCIDSEE+R    +  +NT++ F F P+EN  E++V D   M + V+ +  I+ +S ++V +APLRPDL  DN  ++ +V+ VM  A+++   E+R+D IR   D    + Y Y    D   R ++ +++L EL+   LD+N T  G    ++ F    GY   +   IAVV  NR+AQGW +I WV LL+ RLIA R+ + F+ELAY A+KKVHG  +SVGPLA  E R  +++ KFSDGRVGHIG+R A+ RQ  V +F  C++VLG+
Sbjct:  121 GVPCPQLRYRKLLFPLLIRFTLLALQLFAIYSSSTTTRDVPVTPNFNLVLSNNTKPLPSPKGNFPSCRSWIQSTRGVEQNGDVLLCIDSEESRRFEGQPSQNTTLHFLFSPDENRFEFIVRDHLAMESRVFVKAKISFLSGENVGVAPLRPDLTSDNGTAEELVKKVMVNALRRQRVEIRMDDIRTFTDSN--VTYNYSCSLDLCDRVKLSNAVLDELRTLKLDVNKTSTG----VWLFN-GTGYIFEDKKAIAVVSSNRVAQGWFLIIWVALLLTRLIANRWLSDFEELAYAALKKVHGERMSVGPLAVTEHRAPVFVRKFSDGRVGHIGFRPASPRQRVVESFQDCEVVLGT 467          
BLAST of Ggra9822.t1 vs. uniprot
Match: A0A2V3IGY5 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IGY5_9FLOR)

HSP 1 Score: 99.0 bits (245), Expect = 5.270e-22
Identity = 49/61 (80.33%), Postives = 54/61 (88.52%), Query Frame = 0
Query:  339 VLYTFKRDRGYFRHENAVIAVVGKNRLAQGWLMIAWVGLLVVRLIAQRFFTVFDELAYPAV 399
            +LY FK+++  FRHENAVIAVVG  RLAQGWLMIAW+GLLVVRLI QRFF VFDELAYPAV
Sbjct:    1 MLYGFKQEQENFRHENAVIAVVGGKRLAQGWLMIAWLGLLVVRLIGQRFFKVFDELAYPAV 61          
The following BLAST results are available for this feature:
BLAST of Ggra9822.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IS942.130e-8242.66Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IGY55.270e-2280.33Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 75..105
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 53..105
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 385..470
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 137..365
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 117..136
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..116
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 366..384

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000160_piloncontigtig00000160_pilon:32056..33468 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra9822.t1Ggra9822.t1Gracilaria gracilis GNS1m malemRNAtig00000160_pilon 32056..33468 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra9822.t1 ID=Ggra9822.t1|Name=Ggra9822.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=471bp
MRGMLQTLSGLEYPAREVSTVPPTATTRGWAPWRWFGARHRAENVLTTKQ
PVDEHVSADGAHRGAAALANEADTERSLSDTDNDVESHLPPPTERLRRAG
IPDRDGVPRPRVKRYRLITPIAIRFTVLLLELGAIYSSSNIAANVLAGRS
FNVRLTERNQPFNATDARNSQCDEFIENARGVEQSGTVLLCIDSEENRDL
TNRHENTSVFFRFDPNENNMEYVVEDKFVMTTSVYARVLINLISDDDVQL
APLRPDLPVDNNYSKSVVQGVMNRAMQKLGFEVRIDQIRESVDEENVIKY
EYDRFFDSSTREEIRDSLLSELQQFTLDLNVTQPGEEDVLYTFKRDRGYF
RHENAVIAVVGKNRLAQGWLMIAWVGLLVVRLIAQRFFTVFDELAYPAVK
KVHGADLSVGPLAKVEKRETLYISKFSDGRVGHIGYRAANERQDRVPNFY
GCDIVLGSGKSLKRRVRAAR*
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