Ggra9770.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra9770.t1
Unique NameGgra9770.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length369
Homology
BLAST of Ggra9770.t1 vs. uniprot
Match: A0A2V3ISB8 (Putative mitochondrial chaperone BCS1-A n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ISB8_9FLOR)

HSP 1 Score: 378 bits (971), Expect = 3.480e-125
Identity = 217/489 (44.38%), Postives = 262/489 (53.58%), Query Frame = 0
Query:    1 MAPELQPLSFSPVPQGSLTHFPESHQKELVQIFDVPANRISSCTVTHETRKLYNTILLYAALFPNTLDSNDARRFFVNHEDPYVDANTDEDDHSLSRLRRNRLLSMSPGIAPGSGTRRPKAPLPKLLMDVGSTVVCWPPPEDLVPQFLILNGDHQPYKLPDGMGDSVSLHIMHYEMGAPLSSCGEG-ITPLHVVRVSTHHGDEALQEFLKGMLQWNVDRSSPDHQGRKYNLYRFKCDSS-------------------------------------------------------------------------------------------------------------------------------------------------EGLITIMTTNHVDRLDPALIRGGRVDRRFRFVPPSEGQLAILFRLFYRNASDEQVNQFVESLVRWGEDNEAPTIATLQQLFIQYRGRSVEMCLAALPGFLSESAA 343
            MA +L PLSFS VPQ +LTHFP+SH K L+Q+FDVPA+RISSCT+ H+  KL+N ILLYAAL PN    N ARRF++N  DPYV  + D+ D S +R  R++ L  S  IAPG G RR  AP+PKL MD+G+TVV WPPPE LVP+FL LN +H+PYKLPDGM DS+++HIMHYE+G P  S  +  ++ LHV RVSTHHGDEALQ FL+G+LQW+VDRS+PDH GRKYNLYRFK DS                                                                                                                                                  EGLITIMTTNH +RLDPALIRGGR+DRRF F  PSE +LA LFR+FY +A +E VNQFV  +  W ++    T+ATLQQ FI +RGRS E C+  L  FLSE  A
Sbjct:    1 MASDLSPLSFSSVPQAALTHFPDSHAKHLIQVFDVPADRISSCTIMHDNEKLFNAILLYAALCPNPAKPNLARRFYINSSDPYVKGDDDK-DVSPTRSHRSKHLH-SRSIAPGKGERRAAAPVPKLKMDIGTTVVYWPPPEHLVPKFLTLNDNHEPYKLPDGMEDSINVHIMHYEVGTPQKSILQNDMSSLHVARVSTHHGDEALQVFLQGILQWSVDRSNPDHNGRKYNLYRFKVDSCGVGSWEEQGSRRGRPHESVLLREGQMGAILEDIEQFLHPDAKDWYIQHGLPHRRSFLFEGSPGTGKTSTIRVIAGQYSLSCCFLSMTNEKFSNQLLCDALSELPSNALLVLEDVDALFNADRTSASSSSLTFSGLLNVLDGVTSVEGLITIMTTNHANRLDPALIRGGRIDRRFCFTAPSEKELAALFRMFYEDAPEELVNQFVTEVAEWKKNGHEATVATLQQFFISFRGRSAEKCVEGLQVFLSEQPA 487          
BLAST of Ggra9770.t1 vs. uniprot
Match: R7QR17 (AAA domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QR17_CHOCR)

HSP 1 Score: 103 bits (258), Expect = 1.560e-21
Identity = 57/127 (44.88%), Postives = 76/127 (59.84%), Query Frame = 0
Query:  214 WNVDRSSPDHQGRKYNLYRFKCD---SSEGLITIMTTNHVDRLDPALIRGGRVDRRFRFVPPSEGQLAILFRLFYRNASDEQVNQFVESLVRWGEDNEAPTIATLQQLFIQYRGRSVEMCLAALPGF 337
            +N DR+S +     ++ +    D   S++G+IT+MTTNH+ +LD ALIRGGRVDRRF F  P E Q+  LF  FY  A  E   +FV ++     D EA +IATLQQLFI  R  S E C  ++  F
Sbjct:  186 FNKDRTSAEAPNLSFSSFLNALDGLISADGVITVMTTNHIAKLDSALIRGGRVDRRFHFPSPDEEQIKQLFMSFYPEAGQEVAQEFVRAVFSRLGDKEARSIATLQQLFIDQRENSAEECARSVASF 312          
BLAST of Ggra9770.t1 vs. uniprot
Match: A0A2V3IN40 (Putative mitochondrial chaperone BCS1-B n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IN40_9FLOR)

HSP 1 Score: 105 bits (262), Expect = 3.050e-21
Identity = 54/104 (51.92%), Postives = 71/104 (68.27%), Query Frame = 0
Query:  237 SSEGLITIMTTNHVDRLDPALIRGGRVDRRFRFVPPSEGQLAILFRLFYRNASDEQVNQFVESLVRWGEDNEAPTIATLQQLFIQYRGRSVEMCLAALPGFLSE 340
            S +G+ITI TTNH+++LDPALIR GRVDRRF FV P+  Q+  LF+ FY +ASDE    F +++    E+ EA +IATLQQ FI  R +S E C+  +P F  E
Sbjct:  427 SIDGIITIFTTNHIEKLDPALIRAGRVDRRFEFVHPNTDQMCALFKSFYNSASDELAKSFAKTVFDRPEE-EARSIATLQQHFIYTRKKSAEECVELIPRFFKE 529          
BLAST of Ggra9770.t1 vs. uniprot
Match: R7QRT0 (AAA domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QRT0_CHOCR)

HSP 1 Score: 103 bits (257), Expect = 1.330e-20
Identity = 57/127 (44.88%), Postives = 76/127 (59.84%), Query Frame = 0
Query:  214 WNVDRSSPDHQGRKYNLYRFKCD---SSEGLITIMTTNHVDRLDPALIRGGRVDRRFRFVPPSEGQLAILFRLFYRNASDEQVNQFVESLVRWGEDNEAPTIATLQQLFIQYRGRSVEMCLAALPGF 337
            +N DR+S +     ++ +    D   S++G+IT+MTTNH+ +LD ALIRGGRVDRRF F  P E Q+  LF  FY  A  E   +FV ++     D EA +IATLQQLFI  R  S E C  ++  F
Sbjct:  387 FNKDRTSAEAPNLSFSSFLNALDGLISADGVITVMTTNHIAKLDSALIRGGRVDRRFHFPSPDEEQIQQLFMSFYPEAGQEVAQKFVRAVFSRLGDKEARSIATLQQLFIDQRENSAEECARSVASF 513          
BLAST of Ggra9770.t1 vs. uniprot
Match: A0A2V3IV90 (Mitochondrial chaperone BCS1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IV90_9FLOR)

HSP 1 Score: 101 bits (252), Expect = 6.670e-20
Identity = 46/101 (45.54%), Postives = 73/101 (72.28%), Query Frame = 0
Query:  237 SSEGLITIMTTNHVDRLDPALIRGGRVDRRFRFVPPSEGQLAILFRLFYRNASDEQVNQFVESLVRWGEDNEAPTIATLQQLFIQYRGRSVEMCLAALPGF 337
            S+EG+ITI+++NH+++LDPALIRGGRVD+RF F  P+   +  +F+ FY + S++   +F +S++   E +EA ++ATLQQLFI +RG + E C+  +  F
Sbjct:  448 SAEGIITILSSNHIEKLDPALIRGGRVDKRFHFEKPNAEHIEQIFKNFYPDTSEDITKRFSQSVLSRKEGDEARSMATLQQLFIHFRGETAETCIDGVDDF 548          
BLAST of Ggra9770.t1 vs. uniprot
Match: R7QI29 (AAA domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QI29_CHOCR)

HSP 1 Score: 100 bits (249), Expect = 1.740e-19
Identity = 56/127 (44.09%), Postives = 76/127 (59.84%), Query Frame = 0
Query:  214 WNVDRSSPDHQGRKYNLYRFKCD---SSEGLITIMTTNHVDRLDPALIRGGRVDRRFRFVPPSEGQLAILFRLFYRNASDEQVNQFVESLVRWGEDNEAPTIATLQQLFIQYRGRSVEMCLAALPGF 337
            +N DR+S +     ++ +    D   S++G+IT+MTTN++ +LD ALIRGGRVDRR  F  P E Q+  LF  FY  A  E   +FV ++    ED EA +IATLQQLFI  R  S E C  ++  F
Sbjct:  446 FNKDRTSAEAPKLSFSSFLNALDGLISADGVITVMTTNNIAKLDSALIRGGRVDRRVHFPSPDEEQIKELFMSFYPEARQEVAQEFVSAVFSRFEDKEARSIATLQQLFIDQRENSAEECARSVASF 572          
BLAST of Ggra9770.t1 vs. uniprot
Match: R7QJY8 (AAA domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QJY8_CHOCR)

HSP 1 Score: 99.8 bits (247), Expect = 3.750e-19
Identity = 52/104 (50.00%), Postives = 69/104 (66.35%), Query Frame = 0
Query:  237 SSEGLITIMTTNHVDRLDPALIRGGRVDRRFRFVPPSEGQLAILFRLFYRNASDEQVNQFVESLVRWGEDNEAPTIATLQQLFIQYRGRSVEMCLAALPGFLSE 340
            S++G++TI TTNH+++LDPALIRGGR+DRRF FV P+   +  LF  FY NAS E   +F + ++   E+ EA +IATLQQ FI  R    E  +  LP F SE
Sbjct:  615 STDGILTIYTTNHIEKLDPALIRGGRIDRRFEFVHPNHKHMCSLFLSFYENASKEVAERFADEVLNRPEE-EARSIATLQQHFIFTRKYDAETSVKMLPQFFSE 717          
BLAST of Ggra9770.t1 vs. uniprot
Match: A0A2V3IE99 (Mitochondrial chaperone BCS1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IE99_9FLOR)

HSP 1 Score: 89.4 bits (220), Expect = 8.190e-18
Identity = 46/93 (49.46%), Postives = 62/93 (66.67%), Query Frame = 0
Query:  245 MTTNHVDRLDPALIRGGRVDRRFRFVPPSEGQLAILFRLFYRNASDEQVNQFVESLVRWGEDNEAPTIATLQQLFIQYRGRSVEMCLAALPGF 337
            MTTNH++RL+ ALIRGGRVDRRF F  PSE QL  LF  +Y++AS+E   +F  ++    E  EA +IATLQQLF+ +R    + C+  +  F
Sbjct:    1 MTTNHMERLESALIRGGRVDRRFHFDWPSERQLQRLFLTYYKDASEELAAEFARAVFERPEGIEARSIATLQQLFVYFRETPAKDCVVGVDEF 93          
BLAST of Ggra9770.t1 vs. uniprot
Match: A0A1X6NWU8 (AAA domain-containing protein n=2 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NWU8_PORUM)

HSP 1 Score: 82.0 bits (201), Expect = 6.160e-14
Identity = 41/101 (40.59%), Postives = 59/101 (58.42%), Query Frame = 0
Query:  238 SEGLITIMTTNHVDRLDPALIRGGRVDRRFRFVPPSEGQLAILFRLFYRNASDEQVNQFVESLVRWGEDNEAPTIATLQQLFIQYRGRSVEMCLAALPGFL 338
            + G IT++++NH   LD ALIR GRVD    F  P+   +A LF  FY  A+      F + +     + E  T+AT+QQLFI+YRGRS++  L  + GF+
Sbjct:  185 TRGRITVLSSNHPQLLDAALIRSGRVDHTVEFALPTRADMATLFTGFYPEATAASAKAFADKVFSVSMNTEDRTVATMQQLFIKYRGRSIKEVLDGVEGFV 285          
BLAST of Ggra9770.t1 vs. uniprot
Match: A0A1W0X948 (Putative Mitochondrial chaperone BCS1 n=1 Tax=Hypsibius dujardini TaxID=232323 RepID=A0A1W0X948_HYPDU)

HSP 1 Score: 75.5 bits (184), Expect = 7.610e-13
Identity = 43/87 (49.43%), Postives = 56/87 (64.37%), Query Frame = 0
Query:  237 SSEGLITIMTTNHVDRLDPALIRGGRVDRRFRFVPPSEGQLAILFRLFYRNASDEQVNQFVESLVRWGEDNEAPTIATLQQLFIQYR 323
            SSEG I  MTTN+VDRLDPALIR GRVD+R       E Q+  +FR F RNA D++V  FV  +    E  +  ++A LQ LF++Y+
Sbjct:   45 SSEGRILFMTTNYVDRLDPALIRPGRVDKRQYIGYADESQVERMFRRFRRNAEDDEVKLFVREVFDRPERPDI-SLAQLQGLFLRYK 130          
The following BLAST results are available for this feature:
BLAST of Ggra9770.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3ISB83.480e-12544.38Putative mitochondrial chaperone BCS1-A n=1 Tax=Gr... [more]
R7QR171.560e-2144.88AAA domain-containing protein n=1 Tax=Chondrus cri... [more]
A0A2V3IN403.050e-2151.92Putative mitochondrial chaperone BCS1-B n=1 Tax=Gr... [more]
R7QRT01.330e-2044.88AAA domain-containing protein n=1 Tax=Chondrus cri... [more]
A0A2V3IV906.670e-2045.54Mitochondrial chaperone BCS1 n=1 Tax=Gracilariopsi... [more]
R7QI291.740e-1944.09AAA domain-containing protein n=1 Tax=Chondrus cri... [more]
R7QJY83.750e-1950.00AAA domain-containing protein n=1 Tax=Chondrus cri... [more]
A0A2V3IE998.190e-1849.46Mitochondrial chaperone BCS1 n=1 Tax=Gracilariopsi... [more]
A0A1X6NWU86.160e-1440.59AAA domain-containing protein n=2 Tax=Porphyra umb... [more]
A0A1W0X9487.610e-1349.43Putative Mitochondrial chaperone BCS1 n=1 Tax=Hyps... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 348..368
IPR003959ATPase, AAA-type, corePFAMPF00004AAAcoord: 234..269
e-value: 1.8E-4
score: 21.9
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 191..272
e-value: 4.1E-8
score: 35.1
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 198..304
IPR003960ATPase, AAA-type, conserved sitePROSITEPS00674AAAcoord: 241..259

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000067_piloncontigtig00000067_pilon:212945..214486 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra9770.t1Ggra9770.t1Gracilaria gracilis GNS1m malemRNAtig00000067_pilon 212945..214486 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra9770.t1 ID=Ggra9770.t1|Name=Ggra9770.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=369bp
MAPELQPLSFSPVPQGSLTHFPESHQKELVQIFDVPANRISSCTVTHETR
KLYNTILLYAALFPNTLDSNDARRFFVNHEDPYVDANTDEDDHSLSRLRR
NRLLSMSPGIAPGSGTRRPKAPLPKLLMDVGSTVVCWPPPEDLVPQFLIL
NGDHQPYKLPDGMGDSVSLHIMHYEMGAPLSSCGEGITPLHVVRVSTHHG
DEALQEFLKGMLQWNVDRSSPDHQGRKYNLYRFKCDSSEGLITIMTTNHV
DRLDPALIRGGRVDRRFRFVPPSEGQLAILFRLFYRNASDEQVNQFVESL
VRWGEDNEAPTIATLQQLFIQYRGRSVEMCLAALPGFLSESAAHAAVVEE
QKEKRTELKKEEGNESKE*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003959ATPase_AAA_core
IPR027417P-loop_NTPase
IPR003960ATPase_AAA_CS