Ggra9496.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra9496.t1
Unique NameGgra9496.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length358
Homology
BLAST of Ggra9496.t1 vs. uniprot
Match: A0A2V3J2R7 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J2R7_9FLOR)

HSP 1 Score: 223 bits (569), Expect = 8.290e-67
Identity = 157/361 (43.49%), Postives = 200/361 (55.40%), Query Frame = 0
Query:    1 MRVPPFYIKKPSSSLHRCSPTASSARRFDGEPSAYSADNSCSSDHHH--QYSLPSS--RVGDRLAKSRATGQNHRDSEREHIIYLLTAIENGRLENALLFVMFSHAYKRDRMLRFGATHSIAASARGAXXXXXXXXXNAHHWHVGCDSTEDNVQRLRPLLYPVSPSCQLMLGQSMVSGATASALLELLMHRRNMWGTTHAVR--ARALDADGRRPRRPPYRAATTAHDAEAVVHFATRLYCREMAIDRTNKYAICDHVQQRLGNLAMAAYNVDHIEATVNPTYSLSQFVYEDHYDV---LPPSPTTPDTAEFGSPLKIRRVEGAKRCTRCGVLKFAGSGHGRSKCADGFSISSHVPYRPPP 352
            MRVPPFYI K      R S  +S  RRF    S  ++D+  S+ +    Q S  SS     DRLAKSRATGQ++RD+EREHI  L+TAIE+GRLEN LLFV++++           A  S A               +A  WHV  D  ED  +     L+ +S   Q MLGQ  +SGA A+ LLEL++HRRNM G    V+  A   DAD R    PPYR ATT   A ++V  A R +CRE +  R    A+ DHVQ RLG++A+AAY++D+IEA +NP   LS                +    ++  F +    RR +GAKRC+RCGVLK  GSGHGRSKCADG  I S VP+   P
Sbjct:    1 MRVPPFYITKS-----RVSSPSSPTRRFHSPTSDITSDSLSSAPNSPLPQCSPASSLRAQSDRLAKSRATGQSYRDNEREHIFRLITAIEHGRLENNLLFVLYANP---------SAPLSCATCISSR---------HAAQWHVPWDVAEDGCEIKDVRLHALSARTQAMLGQGFISGALATVLLELMLHRRNMLGEPCPVQLGAAVADADRRXXXXPPYRTATTQEGAASIVQLAVRQFCRESSRPR----AMWDHVQWRLGHVAVAAYHMDNIEAMLNPQVRLSDCARHSRRGAELECSDAARGVESELFDALGMGRRGDGAKRCSRCGVLKITGSGHGRSKCADGLGICSAVPFPASP 334          
BLAST of Ggra9496.t1 vs. uniprot
Match: A0A2V3J040 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J040_9FLOR)

HSP 1 Score: 166 bits (419), Expect = 5.850e-44
Identity = 133/398 (33.42%), Postives = 190/398 (47.74%), Query Frame = 0
Query:    2 RVPPFYIKKPSSSLHRCSPTASSARRFDGEPSAYSADNSCSSDHHHQYSLPS--SRVGDRLAKSRATGQNHRDSEREHIIYLLTAIENGRLENALLFVMFSHAYKRDRMLRFGATHSIAAS------------------ARGAXXXXXXXXXNAHH----------WHVGCDSTEDNVQRLRPLLYPVSPSCQLMLGQSMVSGATASALLELLMHRRNMWGTTHAVRARALDA-------------DGRRPRRPPYRAATTAHDAEAVVHFATRLYCREMAIDRTNKYAICDHVQQRLGNLAMAAYNVDHIEATVNPTYSL--SQFVYEDHYDVLPPSPTTPDTAEFGSPLKIRRVEGAKRCTRCGVLKFAGSGHGRSKCADGFSISSHVPYRPPPTF 354
            RVPPF + KP+      S T+         PS  S   S   +    ++ PS    V  RLAKSRATGQ +RD+E+  +  L+ AI+NGR+EN LLF ++S A+KR R          AAS                  A G            +           W  G + TED    +  LL+P+S  CQ +L Q  +SGA A+ LLE+++HRRN+      VR +A D+             DGRR +R P+R A      ++++  A R + RE      +   + D+VQ+R+GNL++  ++ D  EA  N    L       ED    +     + +   FGS   +   EG +RCTRCGVLK +GSGHGRSKC DG  ++S VP+   P++
Sbjct:   27 RVPPFSLVKPNHVRRSSSSTS---------PSYNSLKPSTPWNKSRTFASPSWAPDVSRRLAKSRATGQKYRDNEQHRVFRLIIAIQNGRMENCLLFTVYS-AHKRRRSSATPCVEGCAASYCSPSCAMGAASCTFWNKAAGRVEQHRFLYQRRYQCARTKQLGPLWFRGDEITEDCESGVHVLLHPLSNRCQRVLRQRFISGALATTLLEIILHRRNI------VRTQADDSWDEDGDGFSSVETDGRRRKRSPFRKAVAESTMQSLMQLAIREFSREAG----SHPDLADYVQRRMGNLSILMFHYDDAEAWCNAETDLVGDDGPLEDEMPDVEGWSCSGEVNGFGS-WDVTLREGPRRCTRCGVLKVSGSGHGRSKCMDGLGVASTVPFEEAPSW 403          
The following BLAST results are available for this feature:
BLAST of Ggra9496.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3J2R78.290e-6743.49Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3J0405.850e-4433.42Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 36..50
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 36..69

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000873_piloncontigtig00000873_pilon:285109..286182 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra9496.t1Ggra9496.t1Gracilaria gracilis GNS1m malemRNAtig00000873_pilon 285109..286182 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra9496.t1 ID=Ggra9496.t1|Name=Ggra9496.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=358bp
MRVPPFYIKKPSSSLHRCSPTASSARRFDGEPSAYSADNSCSSDHHHQYS
LPSSRVGDRLAKSRATGQNHRDSEREHIIYLLTAIENGRLENALLFVMFS
HAYKRDRMLRFGATHSIAASARGAAAAAAAAAANAHHWHVGCDSTEDNVQ
RLRPLLYPVSPSCQLMLGQSMVSGATASALLELLMHRRNMWGTTHAVRAR
ALDADGRRPRRPPYRAATTAHDAEAVVHFATRLYCREMAIDRTNKYAICD
HVQQRLGNLAMAAYNVDHIEATVNPTYSLSQFVYEDHYDVLPPSPTTPDT
AEFGSPLKIRRVEGAKRCTRCGVLKFAGSGHGRSKCADGFSISSHVPYRP
PPTFAQY*
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