Ggra9168.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Ggra9168.t1
Unique Name	Ggra9168.t1
Type	polypeptide
Organism	Gracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length	205

Homology

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BLAST of Ggra9168.t1 vs. uniprot
Match: A0A2V3IPE5 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IPE5_9FLOR)

HSP 1 Score: 111 bits (277), Expect = 5.190e-27
Identity = 90/164 (54.88%), Postives = 106/164 (64.63%), Query Frame = 0

Query:   18 PLLPSARFRS---SVPLTSQRRPRQYDPRVTAPHRACASPDKADAVKAAKRVYXXXXXXXXXXXXXXXXXXAGLEMQQEPVVKDVRKSTPVA-----KPGAVDAPVVCEGKSCCRMGADAAAMLLGKQTPRAPCMKMCGGAGPSVRVNGNVVKIDLKKAVHDAV 173
            PL P++  R    S P  S+RRPR+  P  + P  AC S DK  A++ AK  Y  XXXXXXXXXXXXXXXX      ++P+ K+  + TPV      K  + DA  VC GKSCCRMGADA AML+GK   RAPCMKMCGG GPSV+    VVK+DLKKAV DAV
Sbjct:   12 PLCPTSDRRLVCYSRPELSRRRPRR-SPVTSPPPLACTSFDKDIALQKAKAAYKAXXXXXXXXXXXXXXXXXESAQLKDPLPKESNR-TPVTLKATTKAHSNDAVAVCNGKSCCRMGADAVAMLIGKNIARAPCMKMCGGVGPSVKQGDTVVKVDLKKAVQDAV 173

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BLAST of Ggra9168.t1 vs. uniprot
Match: R7QD61 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QD61_CHOCR)

HSP 1 Score: 70.5 bits (171), Expect = 3.180e-11
Identity = 35/69 (50.72%), Postives = 45/69 (65.22%), Query Frame = 0

Query:  116 VCEGKSCCRMGADAAAMLLGKQTPR-----------APCMKMCGGAGPSVRVNGNVVKIDLKKAVHDAV 173
            VC GK+C RMGADA A +L ++T +           APCMKMCGG GP+VR   + +K+D KKAV DA+
Sbjct:  170 VCGGKTCKRMGADAVADILQRETRKGFLRDGVVHVDAPCMKMCGGGGPTVRFGADTIKVDFKKAVSDAI 238

The following BLAST results are available for this feature:

BLAST of Ggra9168.t1 vs. uniprot

BLAST of Ggra9168.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A2V3IPE5	5.190e-27	54.88	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]
R7QD61	3.180e-11	50.72	Uncharacterized protein n=1 Tax=Chondrus crispus T...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 60..91
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..48
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 21..39
None	No IPR available	CDD	cd02980	TRX_Fd_family	coord: 116..157 e-value: 0.00805287 score: 32.2141

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00000075_pilon	contig	tig00000075_pilon:284342..284956 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria gracilis GNS1m male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Ggra9168.t1	Ggra9168.t1	Gracilaria gracilis GNS1m male	mRNA	tig00000075_pilon 284342..284956 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Ggra9168.t1 ID=Ggra9168.t1|Name=Ggra9168.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=205bp
MAPPTAVGADPAFAPSQPLLPSARFRSSVPLTSQRRPRQYDPRVTAPHRA
CASPDKADAVKAAKRVYKAAKAEYKARKAEYKALKAGLEMQQEPVVKDVR
KSTPVAKPGAVDAPVVCEGKSCCRMGADAAAMLLGKQTPRAPCMKMCGGA
GPSVRVNGNVVKIDLKKAVHDAVPPDFARSSPSPRVQANSVVELLGETFP
ASVA*