Ggra9168.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra9168.t1
Unique NameGgra9168.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length205
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000075_piloncontigtig00000075_pilon:284342..284956 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra9168Ggra9168Gracilaria gracilis GNS1m malegenetig00000075_pilon 284342..284956 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra9168.t1.stop1Ggra9168.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000075_pilon 284342..284344 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra9168.t1.CDS1Ggra9168.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000075_pilon 284342..284956 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra9168.t1.exon1Ggra9168.t1.exon1Gracilaria gracilis GNS1m maleexontig00000075_pilon 284342..284956 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra9168.t1.start1Ggra9168.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000075_pilon 284954..284956 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra9168.t1Ggra9168.t1Gracilaria gracilis GNS1m malepolypeptidetig00000075_pilon 284342..284956 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra9168.t1 ID=Ggra9168.t1|Name=Ggra9168.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=205bp
MAPPTAVGADPAFAPSQPLLPSARFRSSVPLTSQRRPRQYDPRVTAPHRA
CASPDKADAVKAAKRVYKAAKAEYKARKAEYKALKAGLEMQQEPVVKDVR
KSTPVAKPGAVDAPVVCEGKSCCRMGADAAAMLLGKQTPRAPCMKMCGGA
GPSVRVNGNVVKIDLKKAVHDAVPPDFARSSPSPRVQANSVVELLGETFP
ASVA*
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spliced messenger RNA

>Ggra9168.t1 ID=Ggra9168.t1|Name=Ggra9168.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=615bp|location=Sequence derived from alignment at tig00000075_pilon:284342..284956- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGGCACCTCCCACGGCCGTAGGGGCTGACCCAGCCTTCGCCCCTTCCCA
GCCGCTGCTACCGTCAGCCCGGTTCCGCTCCTCGGTGCCTCTCACATCGC
AACGTCGCCCGCGTCAATATGACCCCCGCGTGACCGCTCCGCACCGTGCA
TGCGCCTCCCCCGACAAGGCAGACGCCGTGAAGGCCGCGAAGAGGGTATA
CAAGGCCGCCAAGGCCGAGTACAAGGCCCGCAAGGCAGAGTACAAAGCGC
TTAAGGCGGGGCTCGAAATGCAACAGGAACCAGTTGTCAAAGACGTGCGC
AAGTCCACGCCCGTGGCCAAACCCGGCGCAGTCGATGCCCCGGTTGTCTG
TGAAGGAAAATCCTGCTGCAGAATGGGTGCTGACGCAGCCGCCATGCTTC
TTGGCAAGCAAACGCCTCGTGCACCGTGTATGAAGATGTGTGGCGGTGCA
GGACCCTCTGTGAGGGTCAACGGTAATGTGGTGAAGATTGACCTGAAGAA
AGCAGTGCATGACGCTGTTCCACCCGACTTTGCGCGATCAAGTCCCTCTC
CTAGGGTCCAAGCTAACAGCGTCGTAGAACTACTTGGGGAAACATTTCCT
GCCAGTGTTGCATGA
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protein sequence of Ggra9168.t1

>Ggra9168.t1 ID=Ggra9168.t1|Name=Ggra9168.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=205bp
MAPPTAVGADPAFAPSQPLLPSARFRSSVPLTSQRRPRQYDPRVTAPHRA
CASPDKADAVKAAKRVYKAAKAEYKARKAEYKALKAGLEMQQEPVVKDVR
KSTPVAKPGAVDAPVVCEGKSCCRMGADAAAMLLGKQTPRAPCMKMCGGA
GPSVRVNGNVVKIDLKKAVHDAVPPDFARSSPSPRVQANSVVELLGETFP
ASVA*
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mRNA from alignment at tig00000075_pilon:284342..284956-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra9168.t1 ID=Ggra9168.t1|Name=Ggra9168.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=615bp|location=Sequence derived from alignment at tig00000075_pilon:284342..284956- (Gracilaria gracilis GNS1m male)
ATGGCACCTCCCACGGCCGTAGGGGCTGACCCAGCCTTCGCCCCTTCCCA
GCCGCTGCTACCGTCAGCCCGGTTCCGCTCCTCGGTGCCTCTCACATCGC
AACGTCGCCCGCGTCAATATGACCCCCGCGTGACCGCTCCGCACCGTGCA
TGCGCCTCCCCCGACAAGGCAGACGCCGTGAAGGCCGCGAAGAGGGTATA
CAAGGCCGCCAAGGCCGAGTACAAGGCCCGCAAGGCAGAGTACAAAGCGC
TTAAGGCGGGGCTCGAAATGCAACAGGAACCAGTTGTCAAAGACGTGCGC
AAGTCCACGCCCGTGGCCAAACCCGGCGCAGTCGATGCCCCGGTTGTCTG
TGAAGGAAAATCCTGCTGCAGAATGGGTGCTGACGCAGCCGCCATGCTTC
TTGGCAAGCAAACGCCTCGTGCACCGTGTATGAAGATGTGTGGCGGTGCA
GGACCCTCTGTGAGGGTCAACGGTAATGTGGTGAAGATTGACCTGAAGAA
AGCAGTGCATGACGCTGTTCCACCCGACTTTGCGCGATCAAGTCCCTCTC
CTAGGGTCCAAGCTAACAGCGTCGTAGAACTACTTGGGGAAACATTTCCT
GCCAGTGTTGCATGA
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Coding sequence (CDS) from alignment at tig00000075_pilon:284342..284956-

>Ggra9168.t1 ID=Ggra9168.t1|Name=Ggra9168.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=615bp|location=Sequence derived from alignment at tig00000075_pilon:284342..284956- (Gracilaria gracilis GNS1m male)
ATGGCACCTCCCACGGCCGTAGGGGCTGACCCAGCCTTCGCCCCTTCCCA
GCCGCTGCTACCGTCAGCCCGGTTCCGCTCCTCGGTGCCTCTCACATCGC
AACGTCGCCCGCGTCAATATGACCCCCGCGTGACCGCTCCGCACCGTGCA
TGCGCCTCCCCCGACAAGGCAGACGCCGTGAAGGCCGCGAAGAGGGTATA
CAAGGCCGCCAAGGCCGAGTACAAGGCCCGCAAGGCAGAGTACAAAGCGC
TTAAGGCGGGGCTCGAAATGCAACAGGAACCAGTTGTCAAAGACGTGCGC
AAGTCCACGCCCGTGGCCAAACCCGGCGCAGTCGATGCCCCGGTTGTCTG
TGAAGGAAAATCCTGCTGCAGAATGGGTGCTGACGCAGCCGCCATGCTTC
TTGGCAAGCAAACGCCTCGTGCACCGTGTATGAAGATGTGTGGCGGTGCA
GGACCCTCTGTGAGGGTCAACGGTAATGTGGTGAAGATTGACCTGAAGAA
AGCAGTGCATGACGCTGTTCCACCCGACTTTGCGCGATCAAGTCCCTCTC
CTAGGGTCCAAGCTAACAGCGTCGTAGAACTACTTGGGGAAACATTTCCT
GCCAGTGTTGCATGA
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