Ggra9160.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra9160.t1
Unique NameGgra9160.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length296
Homology
BLAST of Ggra9160.t1 vs. uniprot
Match: A0A2V3IPA6 (Probable ATP-dependent transporter ycf16 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IPA6_9FLOR)

HSP 1 Score: 392 bits (1007), Expect = 2.350e-135
Identity = 182/245 (74.29%), Postives = 225/245 (91.84%), Query Frame = 0
Query:   45 VPLLELRDIWYRLPNNYDVQLFRGLNLKVFPNEFVVLIGANGAGKSTIINLMTGLIKLRPRHGSILWDGKVMKPKHLLDNIGLVLQDPASYLFLPTVLDELVMGRPEKTPDDVRNVMAAVGLQNVSLLSCPRSLSGGQVRRLALADQLMRNPRPALFALDEPLAGVDWTGRRQLADLLGSLKRMFAIVIISHEPGELLKYADRVIEVGRGGAKEIDPRIVEKAVRVRAERREAAKAKSRMEAIEY 289
            +PLLELRD+WYRLPNN+DV+LFRG+N KVFPNEFV+LIG NGAGKST+I +MTGL K++PR+G +LW+GKVMKPKH+L++IGLVLQDP +Y F+PTVLDEL++GRP+KTP+DVR+V+ AVGLQN+SLL  PRSLSGGQVRRLA+ADQLMR+PRP LFALDEPLAGVDWTGRR++A+LLG+LK+ FAIVI+SHEPGELL+YADRV+EVGRGG +E+ PRIV KA+ +RAER+ A +AK+  EA+EY
Sbjct:    6 LPLLELRDVWYRLPNNFDVKLFRGMNFKVFPNEFVLLIGENGAGKSTVIKIMTGLTKIKPRNGIMLWNGKVMKPKHMLNHIGLVLQDPVNYFFMPTVLDELIVGRPDKTPNDVRDVLEAVGLQNISLLRDPRSLSGGQVRRLAIADQLMRDPRPTLFALDEPLAGVDWTGRREIAELLGTLKKQFAIVIVSHEPGELLEYADRVVEVGRGGTREVHPRIVAKAISIRAERKRAVRAKALQEALEY 250          
BLAST of Ggra9160.t1 vs. uniprot
Match: R7QJQ9 (ABC transporter domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QJQ9_CHOCR)

HSP 1 Score: 231 bits (590), Expect = 7.700e-73
Identity = 111/196 (56.63%), Postives = 149/196 (76.02%), Query Frame = 0
Query:   96 MTGLIKLRPRHGSILWDGKVMKPKHLLDNIGLVLQDPASYLFLPTVLDELVMGRPEKTPDDVRNVMAAVGLQNVSLLSCPRSLSGGQVRRLALADQLMRNPRPALFALDEPLAGVDWTGRRQLADLLGSLKRMFAIVIISHEPGELLKYADRVIEVGRGGAKEIDPRIVEKAVRVRAERREAAKAKSRMEAIEYMK 291
            MTGL  +   +G + W G++ KP  +L+++G+V+Q+P  Y   PTVL+EL MGRP KTP DVR V+AAVGL +VSL + PRSLSGGQ+RRLALA QLMR+P P+LF LDEPLAGVDWT RR + + LGSLK  FAI+I+SHEPG+LL+YADRV+E+ R G  ++D  I+ KAV +R  R+ + +AK+  +A +YM+
Sbjct:    1 MTGLTTVDRGNGELFWQGRLTKPARMLNHVGVVMQNPGQYFLCPTVLEELTMGRPTKTPQDVRLVLAAVGLLDVSLKAPPRSLSGGQIRRLALASQLMRDPLPSLFVLDEPLAGVDWTARRDIINFLGSLKSQFAIIIVSHEPGDLLEYADRVVEISREGMHDLDNDIIRKAVHIRTHRKASERAKAMEDAAQYMR 196          
BLAST of Ggra9160.t1 vs. uniprot
Match: A0A5J4Z620 (Probable ATP-dependent transporter ycf16 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z620_PORPP)

HSP 1 Score: 203 bits (517), Expect = 4.020e-60
Identity = 115/231 (49.78%), Postives = 150/231 (64.94%), Query Frame = 0
Query:   47 LLELRDIWYRLPNNYDVQLFRGLNLKVFPNEFVVLIGANGAGKSTIINLMTGLIKLRPRHGSILWDGKVMKPK-HLLDNIGLVLQDPASYLFLPTVLDELVMGRPEKTPDDVRNVMAAVGLQNVSLLSCPRSLSGGQVRRLALADQLMRNPRPALFALDEPLAGVDWTGRRQLADLLGSLKRMFAIVIISHEPGELLKYADRVIEVGRGGAKEIDPRIVEKAVRVRAERRE 276
            LLELR + Y++    D  LF  L+LK+FPNE VVLIGANG GKST++ L  G  +  P  G I + G+ +K    L   +G VLQ+P    F  TVL+EL   R   TP +VR V+ AVGL N+SL + PR LSGGQ RRLALA+QL R  RP L  LDEPL G+D+  RR++  L   LK+  ++VI+SHEPGE+L  ADRV+++ R G  E+D R V++A+ VR  R E
Sbjct:   97 LLELRQVQYQVRGVLDDYLFHELDLKIFPNELVVLIGANGCGKSTLLKLCGGYAE--PLEGWIYFSGEQVKSTAELRGKVGTVLQEPGRAFFTNTVLEELCFCR-SVTPANVRAVLEAVGLSNISLRADPRRLSGGQQRRLALANQLCRESRPQLLLLDEPLVGIDFRTRREMVALFAQLKQFKSMVIVSHEPGEILLCADRVVQIARRGIMEVDKRTVQRAIAVRKARNE 324          
BLAST of Ggra9160.t1 vs. uniprot
Match: A0A7S1EU60 (Probable ATP-dependent transporter ycf16 n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S1EU60_9RHOD)

HSP 1 Score: 197 bits (500), Expect = 1.260e-57
Identity = 104/234 (44.44%), Postives = 151/234 (64.53%), Query Frame = 0
Query:   45 VPLLELRDIWYRLPNNYDVQLFRGLNLKVFPNEFVVLIGANGAGKSTIINLMTGLIKLRPRHGSILWDGKVMKPKHLLDNIGLVLQDPASYLFLPTVLDELVMGRPEKTPDDVRNVMAAVGLQNVSLLSCPRSLSGGQVRRLALADQLMRNPRPALFALDEPLAGVDWTGRRQLADLLGSLKRMFAIVIISHEPGELLKYADRVIEVGRGGAKEIDPRIVEKAVRVRAERREAA 278
            + + EL+ I Y+   ++D  LF  L+L VFPNE ++++G NG GKST+++L  G  K  P  G I+ DG     + L   IG VLQDP+      TV++EL+M R   TP   R V+ AVGL+N+SL + PR LSGGQ RRLA+A QL+R+  P +  LDEPL G+DW  R+ +  LL +LK+  +I+I++HEPGELL YADRV+++ R    ++D + +  A+ +R +R E A
Sbjct:   99 IAVFELQKIRYQASGDWDSYLFNNLDLAVFPNELILIVGDNGVGKSTLLSLCFGDEK--PMTGVIMLDGIPSNSRKLRSKIGRVLQDPSDAFIFDTVIEELIMLR-STTPARAREVLFAVGLENISLKADPRQLSGGQARRLAIACQLVRDSNPKMLLLDEPLVGIDWIARKGMIQLLNTLKKTKSILIVTHEPGELLPYADRVLQLTRRRLIQVDQKTLHNAIEIRRKRGEYA 329          
BLAST of Ggra9160.t1 vs. uniprot
Match: A0A7S1XHH1 (Probable ATP-dependent transporter ycf16 n=1 Tax=Erythrolobus australicus TaxID=1077150 RepID=A0A7S1XHH1_9RHOD)

HSP 1 Score: 194 bits (492), Expect = 2.030e-56
Identity = 107/227 (47.14%), Postives = 147/227 (64.76%), Query Frame = 0
Query:   47 LLELRDIWYRLPNNYDVQLFRGLNLKVFPNEFVVLIGANGAGKSTIINLMTGLIKLRPRHGSILWDGKVMKPK-HLLDNIGLVLQDPASYLFLPTVLDELVMGRPEKTPDDVRNVMAAVGLQNVSLLSCPRSLSGGQVRRLALADQLMRNPRPALFALDEPLAGVDWTGRRQLADLLGSLKRMFAIVIISHEPGELLKYADRVIEVGRGGAKEIDPRIVEKAVRVRA 272
            +LE+R I +      D  LF  L+  +FP E V++IG NGAGKST ++L TG     P  G I+  G++++ K  L + +G VLQ+PA      TVL+ELV+ R  + P +VR VM+AVGL ++SL + P+ LSGGQ RRLALA  L+R  RP +F +DEPL G+DW  RR L +LL  LKR  +IVI++HEPGELL YADRV ++ R    E+D   + +A+  RA
Sbjct:   86 VLEMRKICHETDQMLDSYLFENLDFVLFPREIVLIIGPNGAGKSTFLSLCTG--GTAPDKGEIIVQGQLIRKKDQLQEYVGYVLQNPAQAFLCDTVLEELVLFRSTQ-PQEVRQVMSAVGLDSISLRADPQQLSGGQQRRLALASVLLREARPRVFVMDEPLVGIDWVARRGLINLLSVLKRSRSIVIVTHEPGELLPYADRVYQLARRHLIEVDAATLHRAIAHRA 309          
BLAST of Ggra9160.t1 vs. uniprot
Match: ABC transporter ATP-binding protein n=1 Tax=Cyanobacteria bacterium SBC TaxID=2821503 RepID=UPI000AC27B0B (ABC transporter ATP-binding protein n=1 Tax=Cyanobacteria bacterium SBC TaxID=2821503 RepID=UPI000AC27B0B)

HSP 1 Score: 166 bits (419), Expect = 7.870e-47
Identity = 86/215 (40.00%), Postives = 138/215 (64.19%), Query Frame = 0
Query:   47 LLELRDIWYRLPNNYDVQLFRGLNLKVFPNEFVVLIGANGAGKSTIINLMTGLIKLRPRHGSILWDGKVMKPKHLLDNIGLVLQDPASYLFLPTVLDELVMGRPEKTPDDVRNVMAAVGLQNVSLLSCPRSLSGGQVRRLALADQLMRNPRPALFALDEPLAGVDWTGRRQLADLLGSLKRMFAIVIISHEPGELLKYADRVIEVGRGGAKEIDP 261
            +L L+++ Y  P ++  ++ R +NL++ P    ++IG +G+GK+T++ +++GL +  P  G I W  + + P+ L    GLV Q P  +    T+L+EL +G PE T   V   +  VGL +++ L+ P +LSGGQ RRLALA QL+R P+  +  LDEP AG+DW+ RRQL  LLG LK+ +++++++H+ GEL++ ADR   + RG   EIDP
Sbjct:    1 MLYLKNLGYHPPASHT-EILRSVNLEIVPQTLGLIIGPSGSGKTTLLEILSGLAE--PTSGQISWRDRELLPEQLRQLAGLVFQFPERHFCGGTILEELRLGHPEITTQQVEIALEEVGLSHLNWLTSPYALSGGQQRRLALAVQLIRQPQ--ILLLDEPTAGLDWSMRRQLVALLGKLKQHWSLLVVTHDAGELMEVADRAWTIERGKVDEIDP 210          
BLAST of Ggra9160.t1 vs. uniprot
Match: W6FWR1 (Iron(III)-transport ATP-binding protein sfuC n=5 Tax=Nodularia TaxID=159191 RepID=W6FWR1_NODSP)

HSP 1 Score: 166 bits (419), Expect = 8.590e-47
Identity = 85/218 (38.99%), Postives = 139/218 (63.76%), Query Frame = 0
Query:   47 LLELRDIWYRLPNNYDVQLFRGLNLKVFPNEFVVLIGANGAGKSTIINLMTGLIKLRPRHGSILWDGKVMKPKHLLDNIGLVLQDPASYLFLPTVLDELVMGRPEKTPDDVRNVMAAVGLQNVSLLSCPRSLSGGQVRRLALADQLMRNPRPALFALDEPLAGVDWTGRRQLADLLGSLKRMFAIVIISHEPGELLKYADRVIEVGRGGAKEIDPRIV 264
            +L +R++ Y  P     ++ + +NL++ P +  ++IG +G+GKST++ +++GL +  P  GS+ W  + + P+ L    GLV Q P  +    T+L+EL +G PE   + VR  ++ VGL+++SL + P +LSGGQ RRLALA QL+R P   L  LDEP AG+DW+ RRQL +LL  LK+ + +++++H+ G+LL  ADR   +  G  + +DP I+
Sbjct:    1 MLYIRNLTYH-PTASPAEILKSINLELVPQQLGMIIGPSGSGKSTLLEILSGLAE--PTSGSLFWREQELIPEQLQQLAGLVFQFPERHFCGGTILEELRLGHPELGSERVRGALSEVGLEHLSLSAAPHALSGGQQRRLALAVQLIRQPN--LLLLDEPTAGLDWSMRRQLVNLLAKLKKDWTLLVVTHDAGDLLAIADRCWTLNHGELQSVDPAIL 213          
BLAST of Ggra9160.t1 vs. uniprot
Match: K9T8A1 (ABC-type cobalt transport system, ATPase component n=2 Tax=Pleurocapsales TaxID=52604 RepID=K9T8A1_9CYAN)

HSP 1 Score: 163 bits (413), Expect = 5.530e-46
Identity = 89/215 (41.40%), Postives = 130/215 (60.47%), Query Frame = 0
Query:   47 LLELRDIWYRLPNNYDVQLFRGLNLKVFPNEFVVLIGANGAGKSTIINLMTGLIKLRPRHGSILWDGKVMKPKHLLDNIGLVLQDPASYLFLPTVLDELVMGRPEKTPDDVRNVMAAVGLQNVSLLSCPRSLSGGQVRRLALADQLMRNPRPALFALDEPLAGVDWTGRRQLADLLGSLKRMFAIVIISHEPGELLKYADRVIEVGRGGAKEIDP 261
            +L L+++ Y  P      +  G+NL++ P E  ++IG +G+GK+T++ ++ GL +     G ILW  + + P HL    GLV Q P  +    T+L+EL +G PE   D +   +  VGL+++   + P SLSGGQ RRLALA QL+R P   L  LDEP AG+DW+ RRQLA LL  LK  + ++I+SH+PGELL  ADR  ++ RG    + P
Sbjct:    1 MLYLKNLVYHPPAT-STPILNGINLELAPQELGLVIGPSGSGKTTLLEILAGLAE--KTKGEILWRDQELTPLHLQQLAGLVFQFPERHFCGGTILEELRLGHPELGRDRIEEALQEVGLEHIPWNTPPHSLSGGQQRRLALAVQLIRQPN--LLLLDEPTAGLDWSMRRQLAKLLAKLKTHWTLLIVSHDPGELLPIADRCWKIARGKLVSVKP 210          
BLAST of Ggra9160.t1 vs. uniprot
Match: A0A1X6NSV9 (Probable ATP-dependent transporter ycf16 n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NSV9_PORUM)

HSP 1 Score: 167 bits (424), Expect = 6.390e-46
Identity = 98/215 (45.58%), Postives = 130/215 (60.47%), Query Frame = 0
Query:   47 LLELRDIWYRLPNNYDVQLFRGLNLKVFPNEFVVLIGANGAGKSTIINLMTGLIKLRPRHGSILWDGKVMKPKH-----LLDNIGLVLQDPASYLFLPTVLDELVMGRPE-KTPDDVRNVMAAVGLQNVSLLSCPRSLSGGQVRRLALADQLMRNPRPALFALDEPLAGVDWTGRRQLADLLGSLKRMFAIVIISHEPGELLKYADRVIEVGRGG 255
            +L  R + Y +P   D  LF  ++L + P++ V+LIGANG GKST++ L+ G      R   +  DG   + +      L   +GLV Q  +      +VL+EL + R +  TPDDVR  + AVGL  VSLL+ P SLSGGQ RRLALA QL+R PR  L  LDEPLAGVD   RR +A LLG +K    + +++H+PGELL  ADRV+ VG GG
Sbjct:  152 VLTFRHLTYTVPTLSDAPLFTDVHLSLHPSQLVLLIGANGCGKSTLLALLAGFRTPSSRATELTLDGVRYRRRRRAAAALRAAVGLVPQRTSDAFLGRSVLEELTLFRDDVTTPDDVRRTLDAVGLGAVSLLAPPPSLSGGQQRRLALASQLLRQPRVRLLLLDEPLAGVDGGARRGIAALLGRVKAALPVAVVTHQPGELLGVADRVLVVGGGG 366          
BLAST of Ggra9160.t1 vs. uniprot
Match: A0A6P0QJL4 (Energy-coupling factor ABC transporter ATP-binding protein n=2 Tax=unclassified Microcoleus TaxID=2642155 RepID=A0A6P0QJL4_9CYAN)

HSP 1 Score: 162 bits (409), Expect = 2.330e-45
Identity = 85/215 (39.53%), Postives = 132/215 (61.40%), Query Frame = 0
Query:   47 LLELRDIWYRLPNNYDVQLFRGLNLKVFPNEFVVLIGANGAGKSTIINLMTGLIKLRPRHGSILWDGKVMKPKHLLDNIGLVLQDPASYLFLPTVLDELVMGRPEKTPDDVRNVMAAVGLQNVSLLSCPRSLSGGQVRRLALADQLMRNPRPALFALDEPLAGVDWTGRRQLADLLGSLKRMFAIVIISHEPGELLKYADRVIEVGRGGAKEIDP 261
            +L L+D+ Y  P    + + + LNL++ P +  ++IG +G+GKST++ ++ GL +     G + W  + + P+HL    GLV Q P  +    T+L+EL MG PE   + V   ++ VGL ++SL + P +LSGGQ RRLALA QL+R P   +  LDEP AG+DW+ RRQL +LL  LK  + + +++H+ G+LLK ADR   +  G  + +DP
Sbjct:    1 MLYLKDVTYH-PAASPIAILKSLNLELAPQQLGLVIGPSGSGKSTLLEILAGLAE--QTKGGVYWRDQELTPEHLQQLGGLVFQFPERHFCGSTILEELRMGHPELGSEKVHEALSEVGLADISLGTAPHALSGGQQRRLALAVQLIRQPN--MLMLDEPTAGLDWSMRRQLVNLLAKLKTHWTLFVVTHDAGDLLKIADRCWMLNHGELQAVDP 210          
The following BLAST results are available for this feature:
BLAST of Ggra9160.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IPA62.350e-13574.29Probable ATP-dependent transporter ycf16 n=1 Tax=G... [more]
R7QJQ97.700e-7356.63ABC transporter domain-containing protein n=1 Tax=... [more]
A0A5J4Z6204.020e-6049.78Probable ATP-dependent transporter ycf16 n=1 Tax=P... [more]
A0A7S1EU601.260e-5744.44Probable ATP-dependent transporter ycf16 n=1 Tax=T... [more]
A0A7S1XHH12.030e-5647.14Probable ATP-dependent transporter ycf16 n=1 Tax=E... [more]
ABC transporter ATP-binding protein n=1 Tax=Cyanobacteria bacterium SBC TaxID=2821503 RepID=UPI000AC27B0B7.870e-4740.00ABC transporter ATP-binding protein n=1 Tax=Cyanob... [more]
W6FWR18.590e-4738.99Iron(III)-transport ATP-binding protein sfuC n=5 T... [more]
K9T8A15.530e-4641.40ABC-type cobalt transport system, ATPase component... [more]
A0A1X6NSV96.390e-4645.58Probable ATP-dependent transporter ycf16 n=1 Tax=P... [more]
A0A6P0QJL42.330e-4539.53Energy-coupling factor ABC transporter ATP-binding... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003593AAA+ ATPase domainSMARTSM00382AAA_5coord: 75..255
e-value: 8.1E-9
score: 45.3
IPR003439ABC transporter-like, ATP-binding domainPFAMPF00005ABC_trancoord: 67..207
e-value: 2.8E-21
score: 76.4
IPR003439ABC transporter-like, ATP-binding domainPROSITEPS50893ABC_TRANSPORTER_2coord: 48..278
score: 16.400032
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 47..294
e-value: 1.9E-47
score: 163.9
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 46..259
NoneNo IPR availablePANTHERPTHR43553:SF1ABC TRANSPORTER I FAMILY MEMBER 11, CHLOROPLASTICcoord: 29..261
NoneNo IPR availablePANTHERPTHR43553HEAVY METAL TRANSPORTERcoord: 29..261
IPR015856ABC transporter, CbiO/EcfA subunitCDDcd03225ABC_cobalt_CbiO_domain1coord: 49..254
e-value: 1.4456E-55
score: 176.889

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000075_piloncontigtig00000075_pilon:266227..267194 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra9160.t1Ggra9160.t1Gracilaria gracilis GNS1m malemRNAtig00000075_pilon 266227..267194 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra9160.t1 ID=Ggra9160.t1|Name=Ggra9160.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=296bp
MNAFVGVPPFFKTFSYSKTRLSRRPASRSRVRACTGKNAAPNIRVPLLEL
RDIWYRLPNNYDVQLFRGLNLKVFPNEFVVLIGANGAGKSTIINLMTGLI
KLRPRHGSILWDGKVMKPKHLLDNIGLVLQDPASYLFLPTVLDELVMGRP
EKTPDDVRNVMAAVGLQNVSLLSCPRSLSGGQVRRLALADQLMRNPRPAL
FALDEPLAGVDWTGRRQLADLLGSLKRMFAIVIISHEPGELLKYADRVIE
VGRGGAKEIDPRIVEKAVRVRAERREAAKAKSRMEAIEYMKKNGT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003593AAA+_ATPase
IPR003439ABC_transporter-like_ATP-bd
IPR027417P-loop_NTPase
IPR015856ABC_transpr_CbiO/EcfA_su