Ggra9129.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra9129.t1
Unique NameGgra9129.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length296
Homology
BLAST of Ggra9129.t1 vs. uniprot
Match: A0A2V3IHP7 (GrpE protein homolog n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IHP7_9FLOR)

HSP 1 Score: 352 bits (904), Expect = 4.070e-119
Identity = 203/299 (67.89%), Postives = 235/299 (78.60%), Query Frame = 0
Query:    5 PSPLAFAAPASALSCPSSEFCGSVTRFRPPTTLRQSAWGNRARIVALGPAAAPPPPGESDENRDQAPELETESPTQPEPTAQAE--AADEIAADDILNSPSFLKKKLEIVQKELIEAQDAADQSSEAVKGEKARYVRLAADFENYRRRSMEDLRKQDNKSTAKVCKEILGVLDNFERAIAAVKPETDREESISSSYQSINKQLLDSLTKLKVEPVDAVGEVFDPSFHEAIQKLESDSYAEDVICQQFQRGYRLGDVLIRPAIVAVSTGPGPAEGEG------EVEDVITEDAEEIEQPV 295
            PS LAFAA A  LS  +S FC +VT FRP  T+R     NRARIVALGP+A PPP  E +E    APELE ES T P+  + +E  +  E+ ADDILNSPSFLKKKLEIVQKEL EA+ A ++  +AVK EK +YVRLAADFENYRRRSMEDLRKQ  KSTAKVCKEIL VLDNFERAIAAV+PET+RE+SISSSYQ+IN+QLLD+LTKLKVEP+DAVGE FDPS HEAIQK+ES+ + EDV+CQQFQRGY LGDVLIRPA+VAVS+GPGP EGE       +  +   E+A E+EQPV
Sbjct:    5 PSKLAFAASAGTLSSSTSAFCIAVTAFRPSGTVRSGRRCNRARIVALGPSAPPPPSNEPEE----APELEVESQT-PDTASDSEPDSLQEVTADDILNSPSFLKKKLEIVQKELNEAKAAIEEGEDAVKEEKGKYVRLAADFENYRRRSMEDLRKQGAKSTAKVCKEILQVLDNFERAIAAVQPETEREKSISSSYQAINRQLLDALTKLKVEPMDAVGETFDPSLHEAIQKVESEEFNEDVVCQQFQRGYCLGDVLIRPAVVAVSSGPGP-EGESASDASDDQSEGFAEEAGEVEQPV 297          
BLAST of Ggra9129.t1 vs. uniprot
Match: R7QNW1 (GrpE protein homolog n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QNW1_CHOCR)

HSP 1 Score: 266 bits (679), Expect = 1.100e-84
Identity = 154/250 (61.60%), Postives = 180/250 (72.00%), Query Frame = 0
Query:   45 RARIVALGPAAAPPPPGESDENRDQAPELETESPTQPEPTAQAEAAD---EIAADDILNSPSFLKKKLEIVQKELIEAQDAADQSSEAVKGEKARYVRLAADFENYRRRSMEDLRKQDNKSTAKVCKEILGVLDNFERAIAAVKPETDREESISSSYQSINKQLLDSLTKLKVEPVDAVGEVFDPSFHEAIQKLESDSYAEDVICQQFQRGYRLGDVLIRPAIVAVSTGPGPAEGEG-EVEDVITEDAEE 290
            RAR  ALG   APP        RD     E E    PE  A         E+ ADDILNSP+FL+KKLEIVQKEL++A+DA  + SEA++ EK RYVRLAADFENYRRRS EDLRKQD KST KVCKEI+ VLDNF+RAI AV PET+RE+ I++SYQSINKQL D+LTKL V P+DA+G VFDP  HEAIQKLES+ + EDV+C Q+QRGY++ + LIR AIV VS GPGPA  +G E   V  E AEE
Sbjct:   44 RARFFALG---APPSXXXXXXXRDXX-XXENEEDAAPEGEAAXXXXXXXXEVTADDILNSPAFLRKKLEIVQKELMDAKDALGEDSEAMQAEKDRYVRLAADFENYRRRSAEDLRKQDTKSTVKVCKEIVTVLDNFDRAIEAVTPETEREKIINNSYQSINKQLADALTKLNVMPIDAIGSVFDPEMHEAIQKLESEEHHEDVVCAQYQRGYKIEETLIRAAIVGVSQGPGPAVADGAEGNGVAEEGAEE 289          
BLAST of Ggra9129.t1 vs. uniprot
Match: A0A7S1XHP5 (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1XHP5_9RHOD)

HSP 1 Score: 187 bits (474), Expect = 2.010e-55
Identity = 99/187 (52.94%), Postives = 132/187 (70.59%), Query Frame = 0
Query:   96 DDILNSPSFLKKKLEIVQKELIEAQDAADQSSEAVKGEKARYVRLAADFENYRRRSMEDLRKQDNKSTAKVCKEILGVLDNFERAIAAVKPETDREESISSSYQSINKQLLDSLTKLKVEPVDAVGEVFDPSFHEAIQKLESDSYAEDVICQQFQRGYRLGDVLIRPAIVAVSTGPGPAEGEGEVED 282
            +++LNSP FLKK LE+V+K+L EA +  + +   V+ +K  + RLAADFEN+RRRS E+  + +  + A++ K+ L VLDNFERA  AV  +TDRE SI SS+Q+INKQLLD   KLKVEP+D  GE FDPS  EAI  +ES   AE  + QQ QRGYR+GD ++R A+  VS+GPGPAE +   +D
Sbjct:    9 EELLNSPVFLKKSLELVKKDLQEAVNEKEVALAQVEEQKEAFKRLAADFENFRRRSSEEATQLEQAAAARILKQFLPVLDNFERAATAVVVDTDRERSILSSFQAINKQLLDGFRKLKVEPIDIAGEKFDPSSMEAISSVESAEIAEGYVLQQLQRGYRIGDRVLRAAMCIVSSGPGPAESDPTTDD 195          
BLAST of Ggra9129.t1 vs. uniprot
Match: A0A7S0ZHI3 (GrpE protein homolog n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZHI3_9RHOD)

HSP 1 Score: 188 bits (478), Expect = 6.200e-55
Identity = 100/190 (52.63%), Postives = 132/190 (69.47%), Query Frame = 0
Query:   88 EAADEIAADDILNSPSFLKKKLEIVQKELIEAQDAADQSSEAVKGEKARYVRLAADFENYRRRSMEDLRKQDNKSTAKVCKEILGVLDNFERAIAAVKPETDREESISSSYQSINKQLLDSLTKLKVEPVDAVGEVFDPSFHEAIQKLESDSYAEDVICQQFQRGYRLGDVLIRPAIVAVSTGPGPAEGE 277
            +A D I+A  +LNSP FL KKLEIVQKEL E     D     +K EK  Y+RLAAD EN+R+RS  +L    N++T  V K++L VLDNFE A  AV P+TD E++I SSY ++NKQLLD L KL VEP++ +G  FDP   EAIQ  +S  YAE+ +  Q +RGY+LG++++RPA+V VS+GPGP + E
Sbjct:   72 DADDGISA--MLNSPEFLSKKLEIVQKELSEQHALVDSLQAELKSEKDSYLRLAADLENFRKRSRSELNDSSNRATVTVLKQLLNVLDNFELAENAVNPKTDAEKAIKSSYSALNKQLLDMLVKLNVEPIETIGAEFDPMVMEAIQMQQSTEYAENKVLYQMKRGYKLGELVVRPALVVVSSGPGPDQTE 259          
BLAST of Ggra9129.t1 vs. uniprot
Match: A0A5J4YHA7 (GrpE protein homolog n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YHA7_PORPP)

HSP 1 Score: 188 bits (478), Expect = 9.530e-55
Identity = 97/175 (55.43%), Postives = 128/175 (73.14%), Query Frame = 0
Query:   96 DDILNSPSFLKKKLEIVQKELIEAQDAADQSSEAVKGEKARYVRLAADFENYRRRSMEDLRKQDNKSTAKVCKEILGVLDNFERAIAAVKPETDREESISSSYQSINKQLLDSLTKLKVEPVDAVGEVFDPSFHEAIQKLESDSYAEDVICQQFQRGYRLGDVLIRPAIVAVSTG 270
            D +LNSP FL+KKLE++QKEL E + A ++   A+K EK  Y+RLAADFEN+RRR+  DL    N++T  V K +L VLDNFE A  A+ P+T+ EESI  SY+++NKQLLD L KLKVEPV+AVG  FDP+  EAI +  SD Y E ++  Q +RGY+LGD+++RPA+V VS G
Sbjct:  120 DALLNSPEFLRKKLEVLQKELAEERAATEKMEAALKNEKESYLRLAADFENFRRRTAADLTDSGNRATVTVLKSLLTVLDNFELAETALAPKTEGEESIMKSYKALNKQLLDVLVKLKVEPVEAVGVEFDPNVMEAITQQPSDEYEEGIVSAQMKRGYKLGDLVVRPAMVVVSMG 294          
BLAST of Ggra9129.t1 vs. uniprot
Match: A0A7S0WCA5 (GrpE protein homolog n=2 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0WCA5_9CRYP)

HSP 1 Score: 179 bits (453), Expect = 6.860e-51
Identity = 97/189 (51.32%), Postives = 125/189 (66.14%), Query Frame = 0
Query:   99 LNSPSFLKKKLEIVQKELIEAQDAADQSSEAVKGE----------KARYVRLAADFENYRRRSMEDLRKQDNKSTAKVCKEILGVLDNFERAIAAVKPETDREESISSSYQSINKQLLDSLTKLKVEPVDAVGEVFDPSFHEAIQKLESDSYAEDVICQQFQRGYRLGDVLIRPAIVAVSTGPGPAEGE 277
            L+SP FLK+K+EI++KEL +AQ       + VK            K  Y+RLAADFEN+RRRS  DL    N +   V K+++ VLDNFE A A VKPETD+EESI SSY ++ KQL +SLTKL V  +D +GE F+P  H+AIQ+ ES  YAE  +CQ  QRGY++G+  +R A+V VS GPGP  GE
Sbjct:  107 LDSPEFLKRKIEILEKELSDAQADTASLDDLVKRNILKTSSAAELKDTYIRLAADFENFRRRSATDLTNAKNAALTSVLKDMVTVLDNFELAAANVKPETDKEESIKSSYDALGKQLTNSLTKLGVVAIDPLGEEFNPMLHDAIQQAESTEYAEGKVCQALQRGYKVGEQTLRAAVVVVSAGPGPEGGE 295          
BLAST of Ggra9129.t1 vs. uniprot
Match: A0A1X6P3H9 (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P3H9_PORUM)

HSP 1 Score: 176 bits (447), Expect = 3.880e-50
Identity = 95/180 (52.78%), Postives = 122/180 (67.78%), Query Frame = 0
Query:   99 LNSPSFLKKKLEIVQKELIEAQDAADQSSEAVKGEKARYVRLAADFENYRRRSMEDLRKQDNKSTAKVCKEILGVLDNFERAIAAVKPETDREESISSSYQSINKQLLDSLTKLKVEPVDAVGEVFDPSFHEAIQKLESDSYAEDVICQQFQRGYRLGDVLIRPAIVAVSTGPGPAEGEG 278
            L+SP+FLKKK+EI+ KEL E +   +     +  EK  Y+RLAADFEN RRRS   L      +TA V K++L  LDNFERA +A KP T  EE + +SYQ+I KQ+L +L +L VEP+D VG  FDP+ H+AI ++ES  YAE VIC Q QRGY+ G  +IRPA+V VS GPGP   +G
Sbjct:   77 LSSPAFLKKKMEILTKELNETKTEKEVLVATLGKEKDSYLRLAADFENVRRRSSTQLAAATTSATATVVKKLLPALDNFERAASAAKPATPAEEKLHTSYQAIQKQMLTALKELGVEPLDTVGAPFDPTQHDAINRMESTEYAEGVICAQLQRGYQGGAGVIRPAVVVVSVGPGPPVADG 256          
BLAST of Ggra9129.t1 vs. uniprot
Match: M2X9Z6 (Molecular chaperone GrpE (Plastid) n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2X9Z6_GALSU)

HSP 1 Score: 176 bits (447), Expect = 6.860e-50
Identity = 85/181 (46.96%), Postives = 130/181 (71.82%), Query Frame = 0
Query:   97 DILNSPSFLKKKLEIVQKELIEAQDAADQSSEAVKGEKARYVRLAADFENYRRRSMEDLRKQDNKSTAKVCKEILGVLDNFERAIAAVKPETDREESISSSYQSINKQLLDSLTKLKVEPVDAVGEVFDPSFHEAIQKLESDSYAEDVICQQFQRGYRLGDVLIRPAIVAVSTGPGPAEGE 277
            DIL SPSFLK+KLE+VQ+EL E++    +  +    +K  Y+RL A+FENYR+R  ++ +     + A V +E++ VLDNFERA AA+   T+ E+ I  SYQ++ KQLLD++ KL VEP+DAVG+ F+P+ HEA+ +++S+ + E ++  Q+QRGY++G+ L+RPA+  VS+GPGP + E
Sbjct:  112 DILQSPSFLKRKLELVQQELEESKAETSKWEKQYHDQKEAYIRLVAEFENYRKRMNKEKQDIAEVTKANVIRELIAVLDNFERAAAAIIVNTESEQKIHDSYQALAKQLLDAMMKLNVEPIDAVGQPFNPNLHEAVNRVDSEDHEEGIVAMQYQRGYKIGERLVRPALCVVSSGPGPHKKE 292          
BLAST of Ggra9129.t1 vs. uniprot
Match: A0A7S0BQY9 (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BQY9_9RHOD)

HSP 1 Score: 172 bits (436), Expect = 1.060e-48
Identity = 84/176 (47.73%), Postives = 127/176 (72.16%), Query Frame = 0
Query:   96 DDILNSPSFLKKKLEIVQKELIEAQDAADQSSEAVKGEKARYVRLAADFENYRRRSMEDLRKQDNKSTAKVCKEILGVLDNFERAIAAVKPETDREESISSSYQSINKQLLDSLTKLKVEPVDAVGEVFDPSFHEAIQKLESDSYAEDVICQQFQRGYRLGDVLIRPAIVAVSTGP 271
            +DILNSP+ LKK++E++Q EL E+Q   ++    ++  K  ++RL+ADFEN+RRRS  ++ +   K++ K+ KE L VLD+FERA + V PET+RE  I+++YQSINKQ +++L KL ++P++A+G  F+   H AIQ+ ES  Y + ++  QFQRGY++G  LIRPA+V VS GP
Sbjct:   68 NDILNSPAMLKKRIEVLQAELDESQVERERLERELELGKESFIRLSADFENFRRRSSAEILESTEKASVKITKEFLTVLDSFERAASGVNPETEREAKINNAYQSINKQFVNTLEKLNIDPIEALGTPFNAEIHSAIQQQESSEYDDGIVMMQFQRGYKVGQRLIRPAMVMVSMGP 243          
BLAST of Ggra9129.t1 vs. uniprot
Match: A0A7S0TZ83 (GrpE protein homolog (Fragment) n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0TZ83_HEMAN)

HSP 1 Score: 171 bits (433), Expect = 7.300e-48
Identity = 101/204 (49.51%), Postives = 134/204 (65.69%), Query Frame = 0
Query:   85 AQAEAADEIAADDILNSPSFLKKKLEIVQKELIEAQDAADQSS-----------EAVKGE-KARYVRLAADFENYRRRSMEDLRKQDNKSTAKVCKEILGVLDNFERAIAAVKPETDREESISSSYQSINKQLLDSLTKLKVEPVDAVGEVFDPSFHEAIQKLESDSYAEDVICQQFQRGYRLGDVLIRPAIVAVSTGPGPAEG 276
            A A A D  A  + L+SP FLK+K+EI++KEL +A+  AD +S           EA   E K  Y+RLAADFEN+RRRS  DL      + + + K++L VLDNFE A A VKPET++EESI  SY S+ KQL ++LTKL V P+D +GE F+P  H+AIQ+ ESD Y E  + +  QRGY +G+  +R A+V VS+GPGPA G
Sbjct:  110 ADAPAEDPFAGLE-LDSPEFLKRKVEILEKELADAK--ADTASLDDLVARNILREASAAELKDTYIRLAADFENFRRRSATDLTNAKKDALSGILKDLLTVLDNFELATANVKPETEKEESIKKSYDSLGKQLTNALTKLGVTPIDPLGEDFNPMLHDAIQQAESDEYPEGKVSKALQRGYMVGEQTLRAAVVVVSSGPGPAGG 310          
The following BLAST results are available for this feature:
BLAST of Ggra9129.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IHP74.070e-11967.89GrpE protein homolog n=1 Tax=Gracilariopsis chorda... [more]
R7QNW11.100e-8461.60GrpE protein homolog n=1 Tax=Chondrus crispus TaxI... [more]
A0A7S1XHP52.010e-5552.94Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
A0A7S0ZHI36.200e-5552.63GrpE protein homolog n=1 Tax=Timspurckia oligopyre... [more]
A0A5J4YHA79.530e-5555.43GrpE protein homolog n=1 Tax=Porphyridium purpureu... [more]
A0A7S0WCA56.860e-5151.32GrpE protein homolog n=2 Tax=Hemiselmis tepida Tax... [more]
A0A1X6P3H93.880e-5052.78Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
M2X9Z66.860e-5046.96Molecular chaperone GrpE (Plastid) n=1 Tax=Galdier... [more]
A0A7S0BQY91.060e-4847.73Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
A0A7S0TZ837.300e-4849.51GrpE protein homolog (Fragment) n=2 Tax=Hemiselmis... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 109..129
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 42..96
NoneNo IPR availablePANTHERPTHR21237:SF27GRPE PROTEIN HOMOLOGcoord: 66..281
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..7
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 26..295
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 8..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..25
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 20..25
NoneNo IPR availablePROSITEPS51257PROKAR_LIPOPROTEINcoord: 1..19
score: 5.0
IPR000740GrpE nucleotide exchange factorPRINTSPR00773GRPEPROTEINcoord: 221..236
score: 47.46
coord: 166..181
score: 42.58
coord: 138..154
score: 44.85
coord: 248..267
score: 47.19
IPR000740GrpE nucleotide exchange factorPFAMPF01025GrpEcoord: 112..269
e-value: 9.2E-39
score: 132.8
IPR000740GrpE nucleotide exchange factorPANTHERPTHR21237GRPE PROTEINcoord: 66..281
IPR000740GrpE nucleotide exchange factorPROSITEPS01071GRPEcoord: 224..267
IPR000740GrpE nucleotide exchange factorHAMAPMF_01151GrpEcoord: 62..269
score: 17.322571
IPR000740GrpE nucleotide exchange factorCDDcd00446GrpEcoord: 134..267
e-value: 2.47905E-44
score: 145.727
IPR009012GrpE nucleotide exchange factor, headGENE3D2.30.22.10Head domain of nucleotide exchange factor GrpEcoord: 214..268
e-value: 2.2E-16
score: 61.5
IPR009012GrpE nucleotide exchange factor, headSUPERFAMILY51064Head domain of nucleotide exchange factor GrpEcoord: 214..270
IPR013805GrpE nucleotide exchange factor, coiled-coilGENE3D3.90.20.20coord: 62..210
e-value: 3.6E-17
score: 64.1
IPR013805GrpE nucleotide exchange factor, coiled-coilSUPERFAMILY58014Coiled-coil domain of nucleotide exchange factor GrpEcoord: 118..211

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000075_piloncontigtig00000075_pilon:63650..64537 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra9129.t1Ggra9129.t1Gracilaria gracilis GNS1m malemRNAtig00000075_pilon 63650..64537 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra9129.t1 ID=Ggra9129.t1|Name=Ggra9129.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=296bp
MASKPSPLAFAAPASALSCPSSEFCGSVTRFRPPTTLRQSAWGNRARIVA
LGPAAAPPPPGESDENRDQAPELETESPTQPEPTAQAEAADEIAADDILN
SPSFLKKKLEIVQKELIEAQDAADQSSEAVKGEKARYVRLAADFENYRRR
SMEDLRKQDNKSTAKVCKEILGVLDNFERAIAAVKPETDREESISSSYQS
INKQLLDSLTKLKVEPVDAVGEVFDPSFHEAIQKLESDSYAEDVICQQFQ
RGYRLGDVLIRPAIVAVSTGPGPAEGEGEVEDVITEDAEEIEQPV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000740GrpE
IPR009012GrpE_head
IPR013805GrpE_coiled_coil