Ggra9128.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra9128.t1
Unique NameGgra9128.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length297
Homology
BLAST of Ggra9128.t1 vs. uniprot
Match: A0A2V3IHV9 (Exosome complex exonuclease RRP42 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IHV9_9FLOR)

HSP 1 Score: 484 bits (1245), Expect = 5.400e-171
Identity = 249/296 (84.12%), Postives = 275/296 (92.91%), Query Frame = 0
Query:    1 MQILSDAEGEYIRSGAKDGVRSDGRAMLDIRPVTLETAVLPTASGSARVRIGKVTDILVGIKPEVVEPSQEVPDEGIISFTVECSSLASPDFVGRGGADLSAELSQLLTRLYTSSVARELRKSLSIIEGKKCWVLHIDALVLDSGGNLFGALSLAVRAALRVVILPRVIVIPGEADEEDEIEVDEEDFSMLESAKVAPIAVTLASLGDRGIYMVDCTSEEEACSKASITMGISPLGKSGGAVLAGTGGIDVDTLSSMLKDATELGKEVLEATDKFLISDMESRLSGEPVQPVGFFS 296
            MQ LSDAE EYIR+GAKDG+RSDGRAMLDIRPVTLET VLPTASGSARVRIGKVTDILVGIKPEV EPSQ+ PDEGIISFTVECSSLASPDFVGRGGADLSAEL QLLTRLYTS V RELR+SLSII+GKKCW+LHIDALVLDSGGNLFGALSLAVRAALRVVILPRVIVIPGEAD++DEIEVDEE+F MLE ++ APIAVTLAS GDRGIYM DCTSEEE+C+ ASITMG+SPLGKS GAV AGTGGID+DTLSSMLKDA +LG E+L+ATD+FL +D+++R+SG P+ P+GFFS
Sbjct:    1 MQFLSDAECEYIRNGAKDGIRSDGRAMLDIRPVTLETTVLPTASGSARVRIGKVTDILVGIKPEVAEPSQDFPDEGIISFTVECSSLASPDFVGRGGADLSAELGQLLTRLYTSPVTRELRRSLSIIKGKKCWILHIDALVLDSGGNLFGALSLAVRAALRVVILPRVIVIPGEADDDDEIEVDEEEFKMLERSRDAPIAVTLASQGDRGIYMADCTSEEESCATASITMGVSPLGKSCGAVSAGTGGIDLDTLSSMLKDAAQLGLEILDATDRFLKTDIDNRMSGAPIVPIGFFS 296          
BLAST of Ggra9128.t1 vs. uniprot
Match: R7QD87 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QD87_CHOCR)

HSP 1 Score: 400 bits (1029), Expect = 3.800e-138
Identity = 203/294 (69.05%), Postives = 247/294 (84.01%), Query Frame = 0
Query:    3 ILSDAEGEYIRSGAKDGVRSDGRAMLDIRPVTLETAVLPTASGSARVRIGKVTDILVGIKPEVVEPSQEVPDEGIISFTVECSSLASPDFVGRGGADLSAELSQLLTRLYTSSVARELRKSLSIIEGKKCWVLHIDALVLDSGGNLFGALSLAVRAALRVVILPRVIVIPGEADEEDEIEVDEEDFSMLESAKVAPIAVTLASLGDRGIYMVDCTSEEEACSKASITMGISPLGKSGGAVLAGTGGIDVDTLSSMLKDATELGKEVLEATDKFLISDMESRLSGEPVQPVGFFS 296
            +LS AE  YI +GA  G+R+DGR +LD+RPVTLET++LPTASGSARVRIG VTDILVG+K EVVEP    PDEG++SF VECSSLASPDFVGRGGADL+AELSQLLTRLY SS  RELR+ L++I G+KCWVLH+DALVLDSGGNL+GALSLAVRAALRVV LPRV++IPGEAD++DEIEV+EE F  L  ++ AP+AVTL+++G RGIY+ D TSEEEAC+KA+ITMG++  G++ GAV  GTGG+D+DTL SMLKDA  +G ++L+ TD FL  D+    SGE V+PVGFFS
Sbjct:    1 MLSGAEKTYIEAGAAQGIRADGRGLLDLRPVTLETSLLPTASGSARVRIGGVTDILVGVKAEVVEPHVNAPDEGLMSFAVECSSLASPDFVGRGGADLNAELSQLLTRLYASSATRELRRGLALIPGRKCWVLHVDALVLDSGGNLYGALSLAVRAALRVVTLPRVVIIPGEADDDDEIEVNEEVFERLSRSEDAPVAVTLSAVGGRGIYIADSTSEEEACAKAAITMGVNLAGRACGAVSGGTGGVDMDTLKSMLKDAVRVGGDILKTTDSFLQDDIARMESGEEVEPVGFFS 294          
BLAST of Ggra9128.t1 vs. uniprot
Match: A0A4Y7LPH5 (EOG090X0CWA n=1 Tax=Eubosmina coregoni TaxID=186181 RepID=A0A4Y7LPH5_9CRUS)

HSP 1 Score: 197 bits (502), Expect = 2.100e-58
Identity = 120/293 (40.96%), Postives = 179/293 (61.09%), Query Frame = 0
Query:    3 ILSDAEGEYIRSGAKDGVRSDGRAMLDIRPVTLETAVLPTASGSARVRIGKVTDILVGIKPEVVEPSQEVPDEGIISFTVECSSLASPDFVGRGGADLSAELSQLLTRLYTSSVARELRKSLSIIEGKKCWVLHIDALVLDSGGNLFGALSLAVRAALRVVILPRVIVIPGEADEEDEIEVDEEDFSMLE-SAKVAPIAVTLASLGDRGIYMVDCTSEEEACSKASITMGISPLGKSGGAVLAGTGGIDVDTLSSMLKDATELGKEVLEATDKFLISDMESRLSGEPVQPVGF 294
            +LS+AE  +I  G +D  R DGR+ LD RP+ LET ++  ASGSAR+R+   +DILVGIK E+  P  E P EG + F V+CS+ A+P+F GRGG DL+ E+S+ L R Y+S    +L + L ++EG +CWVL++D L+L+ GGNLF A+SLAV++AL    +P V V   + +E  E+E+ ++ F       + AP  VTL  +G+   Y+VD T EEE CS + I + ++   K       G+G +  ++LSSMLK   E+G  +    +K L+  ++     E  + VGF
Sbjct:    5 LLSEAEKAFIHHGVQDDFRCDGRSRLDYRPIVLETGLVSNASGSARLRLAN-SDILVGIKVELASPVPEKPKEGRLEFFVDCSANATPEFEGRGGEDLANEISRFLQRSYSSGETLKLTE-LCVLEGLQCWVLYVDILILECGGNLFDAVSLAVKSALHATEIPTVKVAAMDGNE-PELELSDDPFDTKRLDTQNAPCVVTLMKIGNH--YLVDPTPEEETCSSSGIIVSVAGNRKITAVRKIGSGSLHHESLSSMLKTGAEIGAVL----NKILMKKLKDEEKLEKSKKVGF 288          
BLAST of Ggra9128.t1 vs. uniprot
Match: A0A4Y7NMQ1 (EOG090X0CWA n=1 Tax=Scapholeberis mucronata TaxID=202097 RepID=A0A4Y7NMQ1_9CRUS)

HSP 1 Score: 196 bits (498), Expect = 7.870e-58
Identity = 117/293 (39.93%), Postives = 181/293 (61.77%), Query Frame = 0
Query:    3 ILSDAEGEYIRSGAKDGVRSDGRAMLDIRPVTLETAVLPTASGSARVRIGKVTDILVGIKPEVVEPSQEVPDEGIISFTVECSSLASPDFVGRGGADLSAELSQLLTRLYTSSVARELRKSLSIIEGKKCWVLHIDALVLDSGGNLFGALSLAVRAALRVVILPRVIVIPGEADEEDEIEVDEEDFSMLE-SAKVAPIAVTLASLGDRGIYMVDCTSEEEACSKASITMGISPLGKSGGAVLAGTGGIDVDTLSSMLKDATELGKEVLEATDKFLISDMESRLSGEPVQPVGF 294
            +LS+AE  +I    +D +R DGR+ LD RP+ LET ++  ASGSAR+R+   +DILVG+K E+  P+ + P+EG I F V+CS+ A+P+F GRGG DL+ E+SQ L + Y      ++ + L ++ G +CW+L++D L+L+ GGNL+ A+SLAV++AL    +P V V   + D+  E+E+ ++ F   + + +  P AVTL  +G+   Y+VD T EEE CS + I + IS   K       G+G +  DTL SMLK  +E+G  V     + L+ + ++    E +Q VGF
Sbjct:    5 LLSEAEKAFIHHSVQDDLRCDGRSRLDYRPIVLETGLVSNASGSARLRLAN-SDILVGVKVELTSPAPDKPNEGRIEFFVDCSANATPEFEGRGGEDLANEISQFLHKAYLVGSTLDVAE-LCVLPGHQCWILYVDILILECGGNLYDAVSLAVKSALHSTQIPTVKVASMDGDQ-PELELSDDPFDTKKLNTRNLPCAVTLMKIGNH--YLVDPTPEEECCSASGIVVAISADKKVTAVKKIGSGSLHPDTLISMLKTGSEVGSAVNTILTEKLLEEEKN----EKLQKVGF 288          
BLAST of Ggra9128.t1 vs. uniprot
Match: A0A4Y7NLX5 (EOG090X0CWA n=1 Tax=Moina brachiata TaxID=675436 RepID=A0A4Y7NLX5_9CRUS)

HSP 1 Score: 196 bits (497), Expect = 1.180e-57
Identity = 123/293 (41.98%), Postives = 177/293 (60.41%), Query Frame = 0
Query:    3 ILSDAEGEYIRSGAKDGVRSDGRAMLDIRPVTLETAVLPTASGSARVRIGKVTDILVGIKPEVVEPSQEVPDEGIISFTVECSSLASPDFVGRGGADLSAELSQLLTRLYTSSVARELRKSLSIIEGKKCWVLHIDALVLDSGGNLFGALSLAVRAALRVVILPRVIVIPGEAD-EEDEIEVDEEDFSMLESAKVAPIAVTLASLGDRGIYMVDCTSEEEACSKASITMGISPLGKSGGAVLAGTGGIDVDTLSSMLKDATELGKEVLEATDKFLISDMESRLSGEPVQPVGF 294
            ++S+AE  +I  G +D +R DGR+ LD RP+ LET ++  ASGSAR+R+   +DILVGIK E+  PS + P EG I F V+CS+ A+P+F GRGG DL+ ++SQ L R Y S     L + L +I G +CW+L+ID L+L+ GGNLF A+SLAV++AL    +P V V   + D  E E+  D  D   L + + AP AVTL  +G+   ++VD T EEE+CS   I + IS  G        G+G +  +TL++MLK + E+G  + E     L+  +E        + VGF
Sbjct:    5 LISEAEKAFIHHGVQDDLRCDGRSRLDYRPIYLETGIVSNASGSARLRLAN-SDILVGIKVELAAPSPDKPSEGRIEFFVDCSANATPEFEGRGGEDLANQISQFLQRAYASIDTLNLSE-LCVIPGLQCWILYIDILILECGGNLFDAVSLAVKSALYATQIPSVKVAAIDGDVPELELSDDPYDTKSL-NVQNAPSAVTLMKIGNH--FIVDPTPEEESCSSCGIIVAISGNGSVTAVRKTGSGSLHTETLTAMLKTSKEIGAVINE----LLMGKLEQEKKLGSSKKVGF 288          
BLAST of Ggra9128.t1 vs. uniprot
Match: E9G2R6 (EOG090X0CWA n=20 Tax=Daphnia TaxID=6668 RepID=E9G2R6_DAPPU)

HSP 1 Score: 193 bits (491), Expect = 9.350e-57
Identity = 119/293 (40.61%), Postives = 175/293 (59.73%), Query Frame = 0
Query:    3 ILSDAEGEYIRSGAKDGVRSDGRAMLDIRPVTLETAVLPTASGSARVRIGKVTDILVGIKPEVVEPSQEVPDEGIISFTVECSSLASPDFVGRGGADLSAELSQLLTRLYTSSVARELRKSLSIIEGKKCWVLHIDALVLDSGGNLFGALSLAVRAALRVVILPRVIVIPGEADEED-EIEVDEEDFSMLESAKVAPIAVTLASLGDRGIYMVDCTSEEEACSKASITMGISPLGKSGGAVLAGTGGIDVDTLSSMLKDATELGKEVLEATDKFLISDMESRLSGEPVQPVGF 294
            +LS+AE  +I  G +D +R DGR  LD RP+ LET ++  ASGSAR+R+   +DILVG+K E+  P  + P EG + F V+CS+ A+P+F GRGG DL+ E+ + L R Y S     L + LS++ G++CWVL++D L+L+ GGNL+ A+SLAV++AL    +P + V   + D+ + E+  D  D   L +  + P  VTL  +G+   Y+VD T EEE CS + I + +S   K       G+G +  D+L SMLK  +E+G  V     K L+ +    LS    Q VGF
Sbjct:    5 LLSEAEKAFIHHGVQDDLRCDGRTRLDYRPIILETGLVSNASGSARLRLAN-SDILVGVKVELASPLPDKPQEGRLEFFVDCSANATPEFEGRGGEDLANEICRFLQRSYASGDTINLSE-LSVLTGQQCWVLYVDILILECGGNLYDAVSLAVKSALYATQIPSIKVATMDGDQPELELSDDPYDTKRLNTENI-PCVVTLMKIGNH--YLVDPTPEEECCSSSGIVVAVSGNKKITAVRKIGSGSLHPDSLVSMLKTGSEVGAVVNTILMKKLLEEETLELS----QKVGF 288          
BLAST of Ggra9128.t1 vs. uniprot
Match: A0A6P8I6Z1 (exosome complex exonuclease RRP42-like n=1 Tax=Actinia tenebrosa TaxID=6105 RepID=A0A6P8I6Z1_ACTTE)

HSP 1 Score: 192 bits (489), Expect = 1.860e-56
Identity = 124/294 (42.18%), Postives = 176/294 (59.86%), Query Frame = 0
Query:    4 LSDAEGEYIRSGAKDGVRSDGRAMLDIRPVTLETAVLPTASGSARVRIGKVTDILVGIKPEVVEPSQEVPDEGIISFTVECSSLASPDFVGRGGADLSAELSQLLTRLYTSSVARELRKSLSIIEGKKCWVLHIDALVLDSG-GNLFGALSLAVRAALRVVILPRVIVIPGEADEEDEIEVDEEDFSMLESAKVAPIAVTLASLGDRGIYMVDCTSEEEACSKASITMGISPLGKSGGAVLAGTGGIDVDTLSSMLKDATELGKEVLEATDKFLISDMESRLSGEPVQPVGFFS 296
            LS +E  +I SG ++  RSDGRA  D R   +ET ++   SGSARV++ K TDILVG+K E+ EP+ + P EG + F V+CSS ASP+F GRGG DL+A+LS+ + R + +  A +L  SLSII G++CWV++IDALVL+ G GNL+  LS+A++AAL    +P V V     D E EI  D  D   L +    PI +TL+ +G R  ++VD + EEEACS   + + ++  G        G GG+D  T+  ML  A  +GK +    +K L+  +E   S      VGF +
Sbjct:    6 LSCSERRFIVSGVQEDFRSDGRACEDYRYFEVETGIVSNTSGSARVKLSK-TDILVGVKAEIGEPNLKRPKEGRVEFFVDCSSNASPEFNGRGGEDLAADLSRAMERSFNNRSAIDL-PSLSIIPGQQCWVIYIDALVLECGSGNLYDILSIAIKAALHNTSIPNVTVTTDGGDVELEISDDPHDCKRL-NVDNTPIIITLSKIGLR--HVVDASMEEEACSDCHLLVSVNGSGNICSQQKIGAGGMDPQTILEMLDSARNVGKTI----NKKLLEVLEEETSSIKRNKVGFLN 290          
BLAST of Ggra9128.t1 vs. uniprot
Match: exosome complex component RRP42-like n=2 Tax=Acropora TaxID=6127 RepID=UPI00077A6337 (exosome complex component RRP42-like n=2 Tax=Acropora TaxID=6127 RepID=UPI00077A6337)

HSP 1 Score: 192 bits (489), Expect = 1.920e-56
Identity = 121/292 (41.44%), Postives = 178/292 (60.96%), Query Frame = 0
Query:    3 ILSDAEGEYIRSGAKDGVRSDGRAMLDIRPVTLETAVLPTASGSARVRIGKVTDILVGIKPEVVEPSQEVPDEGIISFTVECSSLASPDFVGRGGADLSAELSQLLTRLYTSSVARELRKSLSIIEGKKCWVLHIDALVLDSGGNLFGALSLAVRAALRVVILPRVIVIPGEADEEDEIEVDEEDFSMLESAKVAPIAVTLASLGDRGIYMVDCTSEEEACSKASITMGISPLGKSGGAVLAGTGGIDVDTLSSMLKDATELGKEVLEATDKFLISDMESRLSGEPVQPVGF 294
            +LS+ E  Y+  G +   RSDGR+  D R   +ET ++   SGSAR+R+ K TDILVG+K E+ EP Q  P++G I F V+CS+ ASP+F GRGG +L + L++ L R Y    A +L +SL I+ GK+CWVL+IDA+VL+ GGNLF +LSLAV+AAL    +P V V   E DE+ EI  D  D   L+   + P+ VTL+ +G R  ++VD + +EE CS A + + I+           G+G +D D++  M++ A  +GK++ +A  K L  +     S +  + VGF
Sbjct:    5 MLSEFERTYVVDGIEKDFRSDGRSCQDYRHFEVETGIVSNTSGSARLRLSK-TDILVGVKVEIGEPHQLKPEQGYIEFFVDCSANASPEFEGRGGEELGSMLAKTLERAYNHPSAIDL-ESLCILPGKQCWVLYIDAVVLECGGNLFDSLSLAVKAALFNTRIPNVTVSVEEGDEQLEISDDPHDCRRLDVDPI-PVTVTLSKIGHR--HVVDASPQEETCSLAQLLVSINGDRNICAMQKVGSGALDPDSIFEMIETAHNVGKKLNKALIKALKKEESMATSNQ--EKVGF 289          
BLAST of Ggra9128.t1 vs. uniprot
Match: A0A162N8A9 (Uncharacterized protein n=1 Tax=Phycomyces blakesleeanus (strain ATCC 8743b / DSM 1359 / FGSC 10004 / NBRC 33097 / NRRL 1555) TaxID=763407 RepID=A0A162N8A9_PHYB8)

HSP 1 Score: 192 bits (489), Expect = 2.700e-56
Identity = 117/299 (39.13%), Postives = 176/299 (58.86%), Query Frame = 0
Query:    3 ILSDAEGEYIRSGAKDGVRSDGRAMLDIRPVTLETAVLPTASGSARVRIGKVTDILVGIKPEVVEPSQEVPDEGIISFTVECSSLASPDFVGRGGADLSAELSQLLTRLYTSSVARELRKSLSIIEGKKCWVLHIDALVLDSGGNLFGALSLAVRAALRVVILPRVIVIP-GEADEEDEIEVDEEDFSMLESAKVAPIAVTLASLGDRGIYMVDCTSEEEACSKASITMGISPLGKSGGAVLAGTGGIDVDTLSSMLKDATELGKEVLEATDKFLISD----MESRLSGEPVQPVGFFS 296
            ++S AE  YI  G +   R+DGR  L+ R + LET +L  ASGSAR R+G  +D+LVGIK E+ E  Q+ P++G IS  VECS  AS  F GRG  DL+  L+  L RL +   +      L II G++CWV+HIDA+V+D  GNLF  + +  RAAL    +P+  +   G+ + E E+  D ED   +   +  P++VTL  +G+R  Y++D T  EE CS+ ++T+G++  G+  G    G+G +D   L+ M++ AT L   +++  D  L  +    ++ R  GEPVQ +GFF+
Sbjct:    5 VISPAEKSYIEQGVETDCRADGRGRLEYRHLVLETGLLSQASGSARCRLGN-SDVLVGIKVEIGEIEQDQPNQGRISCNVECSPSASQQFEGRGADDLNNTLTLALERLLSGPQSGLDLDKLCIIPGQQCWVIHIDAMVMDCAGNLFDCIVMTTRAALFNTRIPKTEIQDLGDGEFEFEVMDDVEDAEAIAGWENLPMSVTLYKIGER--YILDPTILEELCSQVTLTVGVNKTGQVCGVQKGGSGSVDPSLLTEMIQTATTLAGPLIQQLDAKLAEEEKNVLDKRRKGEPVQKLGFFA 300          
BLAST of Ggra9128.t1 vs. uniprot
Match: exosome complex exonuclease RRP42 n=1 Tax=Exaiptasia diaphana TaxID=2652724 RepID=UPI000A2A9FB5 (exosome complex exonuclease RRP42 n=1 Tax=Exaiptasia diaphana TaxID=2652724 RepID=UPI000A2A9FB5)

HSP 1 Score: 191 bits (485), Expect = 7.410e-56
Identity = 123/292 (42.12%), Postives = 175/292 (59.93%), Query Frame = 0
Query:    4 LSDAEGEYIRSGAKDGVRSDGRAMLDIRPVTLETAVLPTASGSARVRIGKVTDILVGIKPEVVEPSQEVPDEGIISFTVECSSLASPDFVGRGGADLSAELSQLLTRLYTSSVARELRKSLSIIEGKKCWVLHIDALVLD-SGGNLFGALSLAVRAALRVVILPRVIVIPGEADEEDEIEVDEEDFSMLESAKVAPIAVTLASLGDRGIYMVDCTSEEEACSKASITMGISPLGKSGGAVLAGTGGIDVDTLSSMLKDATELGKEVLEATDKFLISDMESRLSGEPVQPVGF 294
            LS  E  +I SG ++  RSDGR+  D R   +ET ++   SGSAR+R+ K TDILVG+K E+ EP    P +G I F V+CSS +SP+F G GG DL+A+LS+ L R Y +  A +L  SLSI+ G++CWVL+ID +VL+  GGNL+ ALSLAV+AAL    +P V V   E + E EI  D  D   L    + PI +TL+ +G R  +++D + EEEACS   + + ++  G        GTGG+D  T+  ML+ A   GK +    +K L+  +E   + +  + VGF
Sbjct:    6 LSSFERNFIISGVQEDFRSDGRSCEDYRYFEIETGIVSNTSGSARLRLSK-TDILVGVKAEIGEPHPTKPSQGRIEFFVDCSSNSSPEFNGXGGDDLAADLSRALERSYRNKSAVDLH-SLSILHGQQCWVLYIDXVVLECGGGNLYDALSLAVKAALHNTSIPNVTVNTDEGEVELEISDDPHDVKHLNVHNI-PIIITLSKIGLR--HVIDASVEEEACSDCHLLVSVNGDGNICSQQKIGTGGLDPQTIFEMLESARTAGKTL----NKKLLDVLEEESTAQKRRKVGF 288          
The following BLAST results are available for this feature:
BLAST of Ggra9128.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IHV95.400e-17184.12Exosome complex exonuclease RRP42 n=1 Tax=Gracilar... [more]
R7QD873.800e-13869.05Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A4Y7LPH52.100e-5840.96EOG090X0CWA n=1 Tax=Eubosmina coregoni TaxID=18618... [more]
A0A4Y7NMQ17.870e-5839.93EOG090X0CWA n=1 Tax=Scapholeberis mucronata TaxID=... [more]
A0A4Y7NLX51.180e-5741.98EOG090X0CWA n=1 Tax=Moina brachiata TaxID=675436 R... [more]
E9G2R69.350e-5740.61EOG090X0CWA n=20 Tax=Daphnia TaxID=6668 RepID=E9G2... [more]
A0A6P8I6Z11.860e-5642.18exosome complex exonuclease RRP42-like n=1 Tax=Act... [more]
exosome complex component RRP42-like n=2 Tax=Acropora TaxID=6127 RepID=UPI00077A63371.920e-5641.44exosome complex component RRP42-like n=2 Tax=Acrop... [more]
A0A162N8A92.700e-5639.13Uncharacterized protein n=1 Tax=Phycomyces blakesl... [more]
exosome complex exonuclease RRP42 n=1 Tax=Exaiptasia diaphana TaxID=2652724 RepID=UPI000A2A9FB57.410e-5642.12exosome complex exonuclease RRP42 n=1 Tax=Exaiptas... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015847Exoribonuclease, phosphorolytic domain 2PFAMPF03725RNase_PH_Ccoord: 198..261
e-value: 9.8E-6
score: 25.5
IPR027408PNPase/RNase PH domain superfamilyGENE3D3.30.230.70coord: 3..289
e-value: 2.3E-70
score: 239.2
IPR001247Exoribonuclease, phosphorolytic domain 1PFAMPF01138RNase_PHcoord: 30..163
e-value: 3.3E-21
score: 76.2
NoneNo IPR availablePANTHERPTHR11097EXOSOME COMPLEX EXONUCLEASE RIBOSOMAL RNA PROCESSING PROTEINcoord: 1..276
NoneNo IPR availablePANTHERPTHR11097:SF8EXOSOME COMPLEX COMPONENT RRP42coord: 1..276
NoneNo IPR availableCDDcd11367RNase_PH_RRP42coord: 4..276
e-value: 1.69307E-89
score: 265.613
IPR036345Exoribonuclease, PH domain 2 superfamilySUPERFAMILY55666Ribonuclease PH domain 2-likecoord: 198..287
IPR020568Ribosomal protein S5 domain 2-type foldSUPERFAMILY54211Ribosomal protein S5 domain 2-likecoord: 3..223

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000075_piloncontigtig00000075_pilon:61422..62312 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra9128.t1Ggra9128.t1Gracilaria gracilis GNS1m malemRNAtig00000075_pilon 61422..62312 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra9128.t1 ID=Ggra9128.t1|Name=Ggra9128.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=297bp
MQILSDAEGEYIRSGAKDGVRSDGRAMLDIRPVTLETAVLPTASGSARVR
IGKVTDILVGIKPEVVEPSQEVPDEGIISFTVECSSLASPDFVGRGGADL
SAELSQLLTRLYTSSVARELRKSLSIIEGKKCWVLHIDALVLDSGGNLFG
ALSLAVRAALRVVILPRVIVIPGEADEEDEIEVDEEDFSMLESAKVAPIA
VTLASLGDRGIYMVDCTSEEEACSKASITMGISPLGKSGGAVLAGTGGID
VDTLSSMLKDATELGKEVLEATDKFLISDMESRLSGEPVQPVGFFS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015847ExoRNase_PH_dom2
IPR027408PNPase/RNase_PH_dom_sf
IPR001247ExoRNase_PH_dom1
IPR036345ExoRNase_PH_dom2_sf
IPR020568Ribosomal_S5_D2-typ_fold