Ggra910.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra910.t1
Unique NameGgra910.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length446
Homology
BLAST of Ggra910.t1 vs. uniprot
Match: A0A2V3J6I6 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J6I6_9FLOR)

HSP 1 Score: 525 bits (1351), Expect = 2.810e-183
Identity = 259/376 (68.88%), Postives = 304/376 (80.85%), Query Frame = 0
Query:   64 MQKSLSDLNQVFITRYVTWHQSVVSQVRNGELDGSSVRTLIFIGNEGHHGLGDRLRGLLFAYMASVYSDRLLLIKWEDPFPLSTVFVNSPQSNFTFDQSLFPLRLKPDG-EPDVTSVDGAKLKDMQLFTGKETRLLLLCEPRPSFDDLFETAKIFPNLTTSIEMKKIMPLKRRPRSEQFYPLIFKALVRPSADLRRRMTETIDKHNRFAPSRLWKEGPLRRIDTSEPFISIHVRLGYGVGEFSKRFRIQMAGRTMDSVAHCVAGKAMRLAEQEGLTNPPRFYLATDTAEFRLKLKRALTRMDSRVKVMYGTWSMKHVKHMQDKSSEELRLFRYTFMDIYIMSKGRAILRSPSGFPNLAIWMGAIPSQMQFNINKDC 438
            MQ+SL  L +V I RYV WH S VS+VR GELDGSSVRTL+F+GNEG HGLGDRLRG+LFAY+A+V+S+RLLLI W+DPFPLSTV VNS  SN+T+D SLFP R K +G E D   V  A L +M LFTG    L+L CEPRPS DD+F+  + FP L TSI MKKI+PL+RRP   QF+PLIFKAL+RPSA LR+ M E IDKHNRFAPSRLWK+GPL+RIDT +PFIS+H RLGYGV E+ KRF+ QM+GRTM+SVA C+A  AMRLA++E +T+PPRFYLATDT +FRL  K AL RMD + KVMYGTW MKHVK MQ  ++++LRLFRYTFMD+YIMSKG AILRS SGFPNLA+WMG IPSQM FNIN DC
Sbjct:    1 MQESLQALKRVLIDRYVLWHHSTVSKVREGELDGSSVRTLVFVGNEGRHGLGDRLRGMLFAYLAAVFSNRLLLIHWQDPFPLSTVLVNSVHSNYTYDASLFPSRTKEEGGEEDKVYVKKATLMEMHLFTGIHRMLVLECEPRPSLDDVFKAMRKFPRLQTSIAMKKILPLRRRPHPNQFFPLIFKALLRPSAALRKMMAEIIDKHNRFAPSRLWKQGPLKRIDTGKPFISVHARLGYGVAEYIKRFKSQMSGRTMESVAECMAQIAMRLAKRENVTHPPRFYLATDTEQFRLMFKTALMRMDRQAKVMYGTWVMKHVKEMQGHTTDDLRLFRYTFMDLYIMSKGEAILRSNSGFPNLAVWMGGIPSQMGFNIN-DC 375          
BLAST of Ggra910.t1 vs. uniprot
Match: A0A2V3J6A2 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J6A2_9FLOR)

HSP 1 Score: 171 bits (433), Expect = 1.660e-44
Identity = 120/405 (29.63%), Postives = 203/405 (50.12%), Query Frame = 0
Query:   39 FFFENATPETLATRNRKLSLKYVQNMQKSLSDLNQVFITRYVTWHQSVVSQVRNGELDGSSVRTLIFIGNEGHHGLGDRLRGLLFAYMASVYSDRLLLIKWEDPFPLSTVFVNSPQSNFTFDQSLFPLRLKPDGEPDVTSVDGAK-LKDMQLFTGKETRL----LLLCEPRPSFDDLFETAKIFPNLTTSIEMKKIMPLKR--RPRSEQFYPLIFKALVRPSADLRRRMTETIDKHNR-------FAPSR--LWKEGPLRRIDTSEPFISIHVRLGYGVGEFSKRFRIQMAGRTMDSVAHCVAGKAMRLAEQEGLTNPPRFYLATDTAEFRLKLKRALTRMDSRVKVMYGTWSMKHVKHM-QDKSSEELRLFRYTFMDIYIMSKGRAILRSPSGFPNLAIWMGAI 426
            F FE  T  ++A+      + Y Q+M + L    +   + Y+ WH+  +           ++  L++     ++G+GD +RGLL +Y+ +V S R+  I  E PFPLS V  +    NFT+D+ LFP         +++S +  + L+    F   +T L     L+ E +   D  +E   I P L   +E+ K +P      P  E+  P I KAL  PS +LR  +    +  N        F+P +  LW+       +    +IS+H R+GYG  E   RF ++  G T +S+A C+A  A+R+A+Q  + +P  F++++DT  FR   K  + R+    KV    W   H+  + + +S  ++  F  T++D+Y++SKG+++L   SGF ++A+WMGAI
Sbjct:   45 FDFERVTVNSVASGKPNPEV-YKQHMNQLL----RAITSDYIDWHRQQLHICEENATHAQTIPKLVYRSMRRNYGVGDVIRGLLHSYLIAVISKRMFFIDVERPFPLSMVLTSPNGYNFTYDRYLFP---------ELSSYEHIQWLRKSIYFDKLDTALSDTPTLVDESQTVLD--WELFLIIPRLYPQLEISKKLPQSSGFSPTREEVIPFILKALFCPSPELRSLLPGQENTDNLVWPLSTLFSPDQNLLWR-------NEMPAYISVHARVGYGFNETEARFNLKNQGLTPESLATCMAQMAVRMADQRRMLHPHHFFISSDTDHFRTLFKTEVNRLRPSAKVYQSNWQAVHMNRVGRSQSPSKVSDFMNTYVDVYLLSKGKSMLFIRSGFSHVALWMGAI 426          
BLAST of Ggra910.t1 vs. uniprot
Match: A0A2V3ILT8 (Cell surface glycoprotein 1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ILT8_9FLOR)

HSP 1 Score: 84.0 bits (206), Expect = 7.750e-14
Identity = 94/387 (24.29%), Postives = 155/387 (40.05%), Query Frame = 0
Query:   65 QKSLSDL-NQVFITRYVTWHQSVVSQVRNGELDGSSVRTLIFIGNEGHHGLGDRLRGLLFAYMASVYSDRLLLIKWEDPFPLSTVFVNS---PQSNFTF-----DQSLFPLRLKPDGEPDVTSVDGAKLKDMQLFT---GKETRLLLLCEPRPSFDDLFETAKIFPNLTTSIEMKKIMPLKRRPRSEQFYPLIFKALVRPSADLRRRMTETIDKHNRFAPSRLWKEGPLRRIDTSEPFISIHVRLGYGVGEFSKRFRIQMAGRTMDSVAHCVAGKAMRLAEQEGLTNPPRFYLATDTAEFRLKLKRALTRMDSRVKVM-YGTWSMKHVKHMQDKSSEELRLFRYTFMDIYIMSKGRAILRSPSGFPNLAIWMGAIPSQMQFNINKDC 438
            Q  L D   Q  + RY  WH+           +      L+   NE + G+GDR   L+ A++ + +S+R+LL+ W  P+PLS  F  S   P   FT      +Q     R   D +       G  L          G  T    L     +       +K+F NLT  +    ++               F A+++P+A L++ + +                   R+    +PFI +H RLG G+GE   RF    +G + + VA C    A+   +  G+    ++YLATDT  FR   +  L R      ++ +      H K  ++ +SE       T M++ ++SK   I+ S S F  +A ++G +  +    + K C
Sbjct:   97 QSVLDDFFRQHLVNRYAKWHRE----------NRRKAPRLVVRFNETNPGVGDRFSTLVSAFIIASFSNRVLLLDWIQPYPLSHFFSPSSAMPGIEFTDADRREEQQKASSRYICDKQCTKKLHLGHVLGSKHFIIYPQGATTSPQHLVAHFSTTHPRLPLSKVFANLTDVVTNVHVLSSA------------FNAMLKPAAPLKKLLEK-------------------RKRALKQPFIGVHARLGAGLGETGPRFG---SGHSPEQVAKCFVKSALGSGDTHGIR---KYYLATDTVPFRDVFENVLLRERPNASLIRFDDIMPVHTKGCKNNASE----CASTMMELIVLSKSSYIVASKSSFSRVAGYIGNVTVE-SLGVIKQC 431          
BLAST of Ggra910.t1 vs. uniprot
Match: A0A8J4BFA4 (Uncharacterized protein n=1 Tax=Volvox africanus TaxID=51714 RepID=A0A8J4BFA4_9CHLO)

HSP 1 Score: 59.3 bits (142), Expect = 5.450e-6
Identity = 82/321 (25.55%), Postives = 121/321 (37.69%), Query Frame = 0
Query:  113 GLGDRLRGLLFAYMASVYSDRLLLIKWEDPFPLSTVFV-NSPQSNFT-FDQSLFPLRLKPDGEPDVTSVDGAKLKDMQLFTGKETRLLLLCEPRPSFDDLFETAKIFPNLTTSIE----MKKIMPLKRRPRSEQFYPLIFKALVRPSADLRRRMTETIDKHNRFAPSRLWKEGPLRRIDTSEPFISIHVRLGYGVGEFSKRFRIQMAGRTMDSVAHCVAGKAMRLAEQEGL-TNPPRFYLATDTAEFRLKLKRALTRMDSRVKVMYGTWSMKHVKHMQDKSSEELRLFRYTFMDIYIMSKGRAILRSPSGFPNLAIWMGAI 426
            G GDR+RG L+    ++   ++LL+ WE P PL+   V N     FT F+ S F      D        + A  + +                 PS  + F   K +   T        M  I P+    R    Y   F+ L +P+ D+  R  E + +   FAP+                +I+ H R      +  K  +I    RT+D         A  LA+  GL T      L TD   FR  +     R      +         V    DK       +   F+D+Y+MS+GR +L S SGF ++A+WMG I
Sbjct:   77 GTGDRIRGALWLLRVAITYKKILLVDWERPGPLTEFLVPNEVDWTFTGFNASHF----HADNTLSTDDFNDAVYRQV-----------------PSALEKFRATKTYHTNTNQHFDINIMVGITPITDLHRDGSCY---FRLLFKPNPDIVSRGEEYLRQLYGFAPT---------------DYIAWHWRHYDIEQDTEKSVKIPELHRTLDC--------AQELAQNVGLDTYKQPILLLTDFHAFRQMVSHGEFRRLVTPPI---------VPRYIDKGVHAYADYIGIFVDLYLMSRGRCLLTSRSGFSDMAVWMGGI 341          
The following BLAST results are available for this feature:
BLAST of Ggra910.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A2V3J6I62.810e-18368.88Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3J6A21.660e-4429.63Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3ILT87.750e-1424.29Cell surface glycoprotein 1 n=1 Tax=Gracilariopsis... [more]
A0A8J4BFA45.450e-625.55Uncharacterized protein n=1 Tax=Volvox africanus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.11350coord: 281..443
e-value: 9.7E-9
score: 36.7
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 30..445
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 13..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..12
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 25..29
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..29

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000049_piloncontigtig00000049_pilon:328495..329832 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra910.t1Ggra910.t1Gracilaria gracilis GNS1m malemRNAtig00000049_pilon 328495..329832 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra910.t1 ID=Ggra910.t1|Name=Ggra910.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=446bp
MAPFLSTRFLPQFLAIGLLVTISLQISYSNWNTKKYASFFFENATPETLA
TRNRKLSLKYVQNMQKSLSDLNQVFITRYVTWHQSVVSQVRNGELDGSSV
RTLIFIGNEGHHGLGDRLRGLLFAYMASVYSDRLLLIKWEDPFPLSTVFV
NSPQSNFTFDQSLFPLRLKPDGEPDVTSVDGAKLKDMQLFTGKETRLLLL
CEPRPSFDDLFETAKIFPNLTTSIEMKKIMPLKRRPRSEQFYPLIFKALV
RPSADLRRRMTETIDKHNRFAPSRLWKEGPLRRIDTSEPFISIHVRLGYG
VGEFSKRFRIQMAGRTMDSVAHCVAGKAMRLAEQEGLTNPPRFYLATDTA
EFRLKLKRALTRMDSRVKVMYGTWSMKHVKHMQDKSSEELRLFRYTFMDI
YIMSKGRAILRSPSGFPNLAIWMGAIPSQMQFNINKDCKHVKSVG*
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