Ggra910.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra910.t1
Unique NameGgra910.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length446
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000049_piloncontigtig00000049_pilon:328495..329832 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra910Ggra910Gracilaria gracilis GNS1m malegenetig00000049_pilon 328495..329832 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra910.t1.stop1Ggra910.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000049_pilon 328495..328497 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra910.t1.CDS1Ggra910.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000049_pilon 328495..329832 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra910.t1.exon1Ggra910.t1.exon1Gracilaria gracilis GNS1m maleexontig00000049_pilon 328495..329832 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra910.t1.start1Ggra910.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000049_pilon 329830..329832 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra910.t1Ggra910.t1Gracilaria gracilis GNS1m malepolypeptidetig00000049_pilon 328495..329832 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra910.t1 ID=Ggra910.t1|Name=Ggra910.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=446bp
MAPFLSTRFLPQFLAIGLLVTISLQISYSNWNTKKYASFFFENATPETLA
TRNRKLSLKYVQNMQKSLSDLNQVFITRYVTWHQSVVSQVRNGELDGSSV
RTLIFIGNEGHHGLGDRLRGLLFAYMASVYSDRLLLIKWEDPFPLSTVFV
NSPQSNFTFDQSLFPLRLKPDGEPDVTSVDGAKLKDMQLFTGKETRLLLL
CEPRPSFDDLFETAKIFPNLTTSIEMKKIMPLKRRPRSEQFYPLIFKALV
RPSADLRRRMTETIDKHNRFAPSRLWKEGPLRRIDTSEPFISIHVRLGYG
VGEFSKRFRIQMAGRTMDSVAHCVAGKAMRLAEQEGLTNPPRFYLATDTA
EFRLKLKRALTRMDSRVKVMYGTWSMKHVKHMQDKSSEELRLFRYTFMDI
YIMSKGRAILRSPSGFPNLAIWMGAIPSQMQFNINKDCKHVKSVG*
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spliced messenger RNA

>Ggra910.t1 ID=Ggra910.t1|Name=Ggra910.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1338bp|location=Sequence derived from alignment at tig00000049_pilon:328495..329832- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGGCACCCTTCTTGTCTACTCGGTTTCTCCCTCAATTCCTGGCAATTGG
TCTACTCGTTACGATATCCCTTCAAATCTCATACTCTAATTGGAACACAA
AAAAGTACGCCTCCTTCTTCTTCGAGAATGCCACTCCGGAAACGCTTGCC
ACAAGGAACAGGAAACTCAGCCTGAAATATGTTCAAAACATGCAAAAGTC
ATTGTCAGATCTCAATCAAGTCTTCATCACTCGTTACGTCACCTGGCATC
AATCAGTTGTATCTCAAGTACGAAACGGAGAGCTTGATGGCTCATCTGTG
AGAACTCTCATTTTCATTGGCAATGAGGGTCACCATGGACTAGGGGATCG
ACTACGAGGGTTGCTGTTCGCGTACATGGCCTCCGTGTACTCCGATCGCC
TGCTTCTGATCAAATGGGAAGATCCATTTCCTTTGTCCACGGTTTTCGTC
AATAGTCCCCAATCAAACTTTACATTTGATCAGTCTTTGTTTCCGCTTCG
GCTAAAACCGGATGGTGAGCCTGACGTCACGTCTGTCGATGGTGCTAAAT
TGAAGGATATGCAACTCTTTACTGGCAAGGAAACCAGATTACTGTTGCTT
TGTGAACCGAGACCAAGCTTTGACGACTTGTTCGAAACTGCTAAGATTTT
TCCTAACCTAACCACATCCATCGAAATGAAGAAAATTATGCCGTTAAAAA
GACGCCCACGATCAGAACAATTCTACCCTTTGATATTCAAGGCCCTGGTA
AGACCCTCCGCTGACCTGAGGAGGAGGATGACAGAAACAATTGACAAACA
CAACCGATTTGCTCCCTCACGTCTATGGAAGGAAGGTCCGTTGAGACGAA
TCGATACCAGTGAGCCGTTTATTTCCATTCATGTGAGATTAGGGTACGGA
GTGGGAGAATTCAGCAAGAGATTCAGAATTCAGATGGCTGGTCGCACAAT
GGATTCCGTGGCTCATTGTGTTGCAGGGAAAGCCATGAGACTCGCTGAAC
AAGAAGGATTAACAAATCCTCCGCGATTCTATTTAGCTACGGACACTGCC
GAATTTCGCTTGAAGTTAAAACGAGCGCTGACCAGGATGGATAGTAGGGT
AAAGGTTATGTATGGAACTTGGAGTATGAAGCATGTGAAGCATATGCAAG
ATAAAAGCTCAGAGGAATTGAGATTGTTCCGATACACGTTCATGGATATT
TACATTATGTCCAAGGGTAGAGCTATATTGAGAAGTCCATCTGGGTTCCC
AAACCTAGCTATCTGGATGGGTGCAATTCCCTCACAGATGCAATTCAATA
TCAACAAGGACTGCAAGCACGTGAAATCGGTGGGTTGA
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protein sequence of Ggra910.t1

>Ggra910.t1 ID=Ggra910.t1|Name=Ggra910.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=446bp
MAPFLSTRFLPQFLAIGLLVTISLQISYSNWNTKKYASFFFENATPETLA
TRNRKLSLKYVQNMQKSLSDLNQVFITRYVTWHQSVVSQVRNGELDGSSV
RTLIFIGNEGHHGLGDRLRGLLFAYMASVYSDRLLLIKWEDPFPLSTVFV
NSPQSNFTFDQSLFPLRLKPDGEPDVTSVDGAKLKDMQLFTGKETRLLLL
CEPRPSFDDLFETAKIFPNLTTSIEMKKIMPLKRRPRSEQFYPLIFKALV
RPSADLRRRMTETIDKHNRFAPSRLWKEGPLRRIDTSEPFISIHVRLGYG
VGEFSKRFRIQMAGRTMDSVAHCVAGKAMRLAEQEGLTNPPRFYLATDTA
EFRLKLKRALTRMDSRVKVMYGTWSMKHVKHMQDKSSEELRLFRYTFMDI
YIMSKGRAILRSPSGFPNLAIWMGAIPSQMQFNINKDCKHVKSVG*
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mRNA from alignment at tig00000049_pilon:328495..329832-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra910.t1 ID=Ggra910.t1|Name=Ggra910.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1338bp|location=Sequence derived from alignment at tig00000049_pilon:328495..329832- (Gracilaria gracilis GNS1m male)
ATGGCACCCTTCTTGTCTACTCGGTTTCTCCCTCAATTCCTGGCAATTGG
TCTACTCGTTACGATATCCCTTCAAATCTCATACTCTAATTGGAACACAA
AAAAGTACGCCTCCTTCTTCTTCGAGAATGCCACTCCGGAAACGCTTGCC
ACAAGGAACAGGAAACTCAGCCTGAAATATGTTCAAAACATGCAAAAGTC
ATTGTCAGATCTCAATCAAGTCTTCATCACTCGTTACGTCACCTGGCATC
AATCAGTTGTATCTCAAGTACGAAACGGAGAGCTTGATGGCTCATCTGTG
AGAACTCTCATTTTCATTGGCAATGAGGGTCACCATGGACTAGGGGATCG
ACTACGAGGGTTGCTGTTCGCGTACATGGCCTCCGTGTACTCCGATCGCC
TGCTTCTGATCAAATGGGAAGATCCATTTCCTTTGTCCACGGTTTTCGTC
AATAGTCCCCAATCAAACTTTACATTTGATCAGTCTTTGTTTCCGCTTCG
GCTAAAACCGGATGGTGAGCCTGACGTCACGTCTGTCGATGGTGCTAAAT
TGAAGGATATGCAACTCTTTACTGGCAAGGAAACCAGATTACTGTTGCTT
TGTGAACCGAGACCAAGCTTTGACGACTTGTTCGAAACTGCTAAGATTTT
TCCTAACCTAACCACATCCATCGAAATGAAGAAAATTATGCCGTTAAAAA
GACGCCCACGATCAGAACAATTCTACCCTTTGATATTCAAGGCCCTGGTA
AGACCCTCCGCTGACCTGAGGAGGAGGATGACAGAAACAATTGACAAACA
CAACCGATTTGCTCCCTCACGTCTATGGAAGGAAGGTCCGTTGAGACGAA
TCGATACCAGTGAGCCGTTTATTTCCATTCATGTGAGATTAGGGTACGGA
GTGGGAGAATTCAGCAAGAGATTCAGAATTCAGATGGCTGGTCGCACAAT
GGATTCCGTGGCTCATTGTGTTGCAGGGAAAGCCATGAGACTCGCTGAAC
AAGAAGGATTAACAAATCCTCCGCGATTCTATTTAGCTACGGACACTGCC
GAATTTCGCTTGAAGTTAAAACGAGCGCTGACCAGGATGGATAGTAGGGT
AAAGGTTATGTATGGAACTTGGAGTATGAAGCATGTGAAGCATATGCAAG
ATAAAAGCTCAGAGGAATTGAGATTGTTCCGATACACGTTCATGGATATT
TACATTATGTCCAAGGGTAGAGCTATATTGAGAAGTCCATCTGGGTTCCC
AAACCTAGCTATCTGGATGGGTGCAATTCCCTCACAGATGCAATTCAATA
TCAACAAGGACTGCAAGCACGTGAAATCGGTGGGTTGA
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Coding sequence (CDS) from alignment at tig00000049_pilon:328495..329832-

>Ggra910.t1 ID=Ggra910.t1|Name=Ggra910.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=1338bp|location=Sequence derived from alignment at tig00000049_pilon:328495..329832- (Gracilaria gracilis GNS1m male)
ATGGCACCCTTCTTGTCTACTCGGTTTCTCCCTCAATTCCTGGCAATTGG
TCTACTCGTTACGATATCCCTTCAAATCTCATACTCTAATTGGAACACAA
AAAAGTACGCCTCCTTCTTCTTCGAGAATGCCACTCCGGAAACGCTTGCC
ACAAGGAACAGGAAACTCAGCCTGAAATATGTTCAAAACATGCAAAAGTC
ATTGTCAGATCTCAATCAAGTCTTCATCACTCGTTACGTCACCTGGCATC
AATCAGTTGTATCTCAAGTACGAAACGGAGAGCTTGATGGCTCATCTGTG
AGAACTCTCATTTTCATTGGCAATGAGGGTCACCATGGACTAGGGGATCG
ACTACGAGGGTTGCTGTTCGCGTACATGGCCTCCGTGTACTCCGATCGCC
TGCTTCTGATCAAATGGGAAGATCCATTTCCTTTGTCCACGGTTTTCGTC
AATAGTCCCCAATCAAACTTTACATTTGATCAGTCTTTGTTTCCGCTTCG
GCTAAAACCGGATGGTGAGCCTGACGTCACGTCTGTCGATGGTGCTAAAT
TGAAGGATATGCAACTCTTTACTGGCAAGGAAACCAGATTACTGTTGCTT
TGTGAACCGAGACCAAGCTTTGACGACTTGTTCGAAACTGCTAAGATTTT
TCCTAACCTAACCACATCCATCGAAATGAAGAAAATTATGCCGTTAAAAA
GACGCCCACGATCAGAACAATTCTACCCTTTGATATTCAAGGCCCTGGTA
AGACCCTCCGCTGACCTGAGGAGGAGGATGACAGAAACAATTGACAAACA
CAACCGATTTGCTCCCTCACGTCTATGGAAGGAAGGTCCGTTGAGACGAA
TCGATACCAGTGAGCCGTTTATTTCCATTCATGTGAGATTAGGGTACGGA
GTGGGAGAATTCAGCAAGAGATTCAGAATTCAGATGGCTGGTCGCACAAT
GGATTCCGTGGCTCATTGTGTTGCAGGGAAAGCCATGAGACTCGCTGAAC
AAGAAGGATTAACAAATCCTCCGCGATTCTATTTAGCTACGGACACTGCC
GAATTTCGCTTGAAGTTAAAACGAGCGCTGACCAGGATGGATAGTAGGGT
AAAGGTTATGTATGGAACTTGGAGTATGAAGCATGTGAAGCATATGCAAG
ATAAAAGCTCAGAGGAATTGAGATTGTTCCGATACACGTTCATGGATATT
TACATTATGTCCAAGGGTAGAGCTATATTGAGAAGTCCATCTGGGTTCCC
AAACCTAGCTATCTGGATGGGTGCAATTCCCTCACAGATGCAATTCAATA
TCAACAAGGACTGCAAGCACGTGAAATCGGTGGGTTGA
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