Ggra9094.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra9094.t1
Unique NameGgra9094.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length300
Homology
The following BLAST results are available for this feature:
BLAST of Ggra9094.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 247..287
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 283..299
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 169..199
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 265..282
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..122
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 238..264
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 143..299
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 72..86
IPR022755Zinc finger, double-stranded RNA bindingPFAMPF12171zf-C2H2_jazcoord: 129..154
e-value: 3.2E-6
score: 27.2
IPR036236Zinc finger C2H2 superfamilySUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 120..161

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000176_piloncontigtig00000176_pilon:176063..176962 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra9094.t1Ggra9094.t1Gracilaria gracilis GNS1m malemRNAtig00000176_pilon 176063..176962 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra9094.t1 ID=Ggra9094.t1|Name=Ggra9094.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=300bp
MIKRLKWNVLHADDGDDPGGLSSSSDESEQELPSAAALKILIENDPHLNP
SGDARDVLQSKELRMLSQAHPRKRKRSADDHLEQGSSSDGEQYLTSDFDD
NDEKQDQTNEIHSNEQPPEDLGYGFSEWHECILCRGKKFYNQEDLESHIQ
SKKHLKAVRKQSALTPQLEVDKGKHEPQTERTSDVDDEEDVERERRHPTV
IAPTPQPLSSSRIRSKSKAKSEHSTKDSQSVLVTEESAIPDHDNKVKEEH
RREAQADEARKRTKRKKEAAKRKLKSLKRRKWEKRNKEKEEFKPETLCQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR022755Znf_C2H2_jaz
IPR036236Znf_C2H2_sf