Ggra9051.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra9051.t1
Unique NameGgra9051.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length364
Homology
BLAST of Ggra9051.t1 vs. uniprot
Match: A0A2V3IRU9 (TATA-box-binding protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IRU9_9FLOR)

HSP 1 Score: 361 bits (927), Expect = 2.470e-122
Identity = 183/190 (96.32%), Postives = 188/190 (98.95%), Query Frame = 0
Query:  173 PSASGRLSHGIIPEIQNVVATTNLDVKLDLKKIALRARNAEYNPKRFAAVIMRIREPKTTALIFSSGKIVVTGAKSERQSSRASRKYAKIVHKLGYDDAKFKEFTVQNIVASCDVNFPVRLEGLAHAHSQFCSYEPELFPGLIYRMIKPKIVLLIFVSGKVVLTGAKVRSDIYEAFDNIYHVLQTFRKAK 362
            P+  GRLSHGI+P+IQNVVATTNLDVKLDLKKIALRARNAEYNPKRFAAVIMRIREPKTTALIFSSGKIVVTGAKSER+SSRASRKYAKIVHKLGYDDAKFKEFTVQNIVASCDVNFPVRLEGLAHAHSQFCSYEPELFPGLIYRMIKPKIVLLIFVSGKVVLTGAKVR+DIYEAFDNIYHVLQTFRKAK
Sbjct:   53 PNTGGRLSHGIVPDIQNVVATTNLDVKLDLKKIALRARNAEYNPKRFAAVIMRIREPKTTALIFSSGKIVVTGAKSERESSRASRKYAKIVHKLGYDDAKFKEFTVQNIVASCDVNFPVRLEGLAHAHSQFCSYEPELFPGLIYRMIKPKIVLLIFVSGKVVLTGAKVRADIYEAFDNIYHVLQTFRKAK 242          
BLAST of Ggra9051.t1 vs. uniprot
Match: A0A7S0ZL16 (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZL16_9RHOD)

HSP 1 Score: 295 bits (755), Expect = 1.230e-96
Identity = 158/209 (75.60%), Postives = 176/209 (84.21%), Query Frame = 0
Query:  154 DNLVSQPGASTDPVKSQG--GPSASGRLSHGIIPEIQNVVATTNLDVKLDLKKIALRARNAEYNPKRFAAVIMRIREPKTTALIFSSGKIVVTGAKSERQSSRASRKYAKIVHKLGYDDAKFKEFTVQNIVASCDVNFPVRLEGLAHAHSQFCSYEPELFPGLIYRMIKPKIVLLIFVSGKVVLTGAKVRSDIYEAFDNIYHVLQTFRK 360
            D +V++  + TDPV      G  A+G+ SHGI+P+IQNVV+TTNL V LDLK+IALRARNAEYNPKRFAAVIMRIREPKTTALIFSSGKIVVTGAKS   +  ASRKYA+IV KLGY+ AKF EF VQNIVASCDV FPVRLE LA AHS FCSYEPELFPGLIYRM+ PK+VLLIFVSGKVVLTGAKVR +IY+AF+NIY VL  FRK
Sbjct:    7 DYVVNEGSSITDPVGVPRPLGSGANGQGSHGILPQIQNVVSTTNLGVSLDLKEIALRARNAEYNPKRFAAVIMRIREPKTTALIFSSGKIVVTGAKSIDSAKLASRKYARIVQKLGYEAAKFSEFKVQNIVASCDVTFPVRLEPLAQAHSHFCSYEPELFPGLIYRMLDPKVVLLIFVSGKVVLTGAKVRDEIYDAFNNIYPVLCLFRK 215          
BLAST of Ggra9051.t1 vs. uniprot
Match: A0A1X6P871 (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P871_PORUM)

HSP 1 Score: 296 bits (757), Expect = 2.240e-96
Identity = 150/188 (79.79%), Postives = 166/188 (88.30%), Query Frame = 0
Query:  175 ASGRLSHGIIPEIQNVVATTNLDVKLDLKKIALRARNAEYNPKRFAAVIMRIREPKTTALIFSSGKIVVTGAKSERQSSRASRKYAKIVHKLGYDDAKFKEFTVQNIVASCDVNFPVRLEGLAHAHSQFCSYEPELFPGLIYRMIKPKIVLLIFVSGKVVLTGAKVRSDIYEAFDNIYHVLQTFRKAK 362
            A+G  SHGI+P+IQNVVATTNL V L+LK IA++ARNAEYNPKRFAAV+MRIREPKTTALIFSSGKIVVTGAKSE  S  ASRKYA+I+ KLGY  A+F EF VQNIVASCDVNFPVRLEGL+H H  FCSYEPELFPGLIYRMI PKIVLLIFVSGKVVLTGAK+R +IY+AF+NIYHVL  FRK +
Sbjct:   54 AAGPGSHGIVPQIQNVVATTNLGVALELKTIAMQARNAEYNPKRFAAVVMRIREPKTTALIFSSGKIVVTGAKSEDASKLASRKYARIIQKLGYAGARFTEFKVQNIVASCDVNFPVRLEGLSHGHHMFCSYEPELFPGLIYRMINPKIVLLIFVSGKVVLTGAKLRQEIYDAFNNIYHVLLQFRKPR 241          
BLAST of Ggra9051.t1 vs. uniprot
Match: A0A7S0XI96 (Hypothetical protein n=1 Tax=Erythrolobus madagascarensis TaxID=708628 RepID=A0A7S0XI96_9RHOD)

HSP 1 Score: 285 bits (730), Expect = 7.030e-93
Identity = 152/201 (75.62%), Postives = 168/201 (83.58%), Query Frame = 0
Query:  164 TDPVKSQG---GPSAS-GRLSHGIIPEIQNVVATTNLDVKLDLKKIALRARNAEYNPKRFAAVIMRIREPKTTALIFSSGKIVVTGAKSERQSSRASRKYAKIVHKLGYDDAKFKEFTVQNIVASCDVNFPVRLEGLAHAHSQFCSYEPELFPGLIYRMIKPKIVLLIFVSGKVVLTGAKVRSDIYEAFDNIYHVLQTFRK 360
            TDP    G   GP A  G+ ++GI+P IQNVV+TTNL V LDLK+IALRARNAEYNPKRFAAVIMRIR+PKTTALIFSSGKIVVTGAK    +  ASRKYA+IV KLGY+ AKF EF VQNIVASCDV FPVRLE LAHAHS FCSYEPELFPGLIYRMI PK+VLL+FVSGKVVLTGAKV+ +IY+AF NIY VL  F+K
Sbjct:   13 TDPNAKPGASNGPGAELGQDTNGIVPSIQNVVSTTNLSVNLDLKEIALRARNAEYNPKRFAAVIMRIRDPKTTALIFSSGKIVVTGAKGIDAARFASRKYARIVQKLGYESAKFSEFKVQNIVASCDVQFPVRLEPLAHAHSNFCSYEPELFPGLIYRMINPKVVLLVFVSGKVVLTGAKVKQEIYDAFKNIYPVLCLFQK 213          
BLAST of Ggra9051.t1 vs. uniprot
Match: A7RWY1 (Predicted protein n=2 Tax=Nematostella vectensis TaxID=45351 RepID=A7RWY1_NEMVE)

HSP 1 Score: 276 bits (707), Expect = 1.040e-89
Identity = 139/180 (77.22%), Postives = 159/180 (88.33%), Query Frame = 0
Query:  182 GIIPEIQNVVATTNLDVKLDLKKIALRARNAEYNPKRFAAVIMRIREPKTTALIFSSGKIVVTGAKSERQSSRASRKYAKIVHKLGYDDAKFKEFTVQNIVASCDVNFPVRLEGLAHAHSQFCSYEPELFPGLIYRMIKPKIVLLIFVSGKVVLTGAKVRSDIYEAFDNIYHVLQTFRKA 361
            GI+P++QN+V+T NL  KLDLKKIAL+ARNAEYNPKRFAAVIMRIREP+TTALIFSSGK+V TGAKSE QS  A+RKYA++V KLG+  AKF EF +QN+V SCDV FP+RLEGL  AH QF SYEPELFPGLIYRM+KP+IVLLIFVSGKVVLTGAKVR +IYEAFDNIY +L+TFRK 
Sbjct:   16 GILPQLQNIVSTVNLGCKLDLKKIALQARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCTGAKSEEQSKLAARKYARVVQKLGFP-AKFTEFKIQNMVGSCDVKFPIRLEGLVLAHGQFSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKVRQEIYEAFDNIYPILKTFRKT 194          
BLAST of Ggra9051.t1 vs. uniprot
Match: A0A6P8I201 (TATA-box-binding protein-like n=2 Tax=Actiniaria TaxID=6103 RepID=A0A6P8I201_ACTTE)

HSP 1 Score: 277 bits (709), Expect = 2.820e-89
Identity = 140/180 (77.78%), Postives = 159/180 (88.33%), Query Frame = 0
Query:  182 GIIPEIQNVVATTNLDVKLDLKKIALRARNAEYNPKRFAAVIMRIREPKTTALIFSSGKIVVTGAKSERQSSRASRKYAKIVHKLGYDDAKFKEFTVQNIVASCDVNFPVRLEGLAHAHSQFCSYEPELFPGLIYRMIKPKIVLLIFVSGKVVLTGAKVRSDIYEAFDNIYHVLQTFRKA 361
            GIIP++QN+V+T NL  KLDLKKIAL ARNAEYNPKRFAAVIMRIR+P+TTALIFSSGK+V TGAKSE QS  A+RKYA++V KLG+  AKF EF +QN+V SCDV FP+RLEGL  AH QF SYEPELFPGLIYRM+KP+IVLLIFVSGKVVLTGAKVRS+IYEAFDNIY +L+TFRK 
Sbjct:   66 GIIPQLQNIVSTVNLGCKLDLKKIALHARNAEYNPKRFAAVIMRIRDPRTTALIFSSGKMVCTGAKSEEQSKLAARKYARVVQKLGFP-AKFTEFKIQNMVGSCDVKFPIRLEGLVLAHGQFSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKVRSEIYEAFDNIYPILKTFRKT 244          
BLAST of Ggra9051.t1 vs. uniprot
Match: Q8ST28 (TRANSCRIPTION INITIATION FACTOR TFIID (TFIID-1) n=9 Tax=Microsporidia TaxID=6029 RepID=Q8ST28_ENCCU)

HSP 1 Score: 275 bits (704), Expect = 3.400e-89
Identity = 138/180 (76.67%), Postives = 160/180 (88.89%), Query Frame = 0
Query:  182 GIIPEIQNVVATTNLDVKLDLKKIALRARNAEYNPKRFAAVIMRIREPKTTALIFSSGKIVVTGAKSERQSSRASRKYAKIVHKLGYDDAKFKEFTVQNIVASCDVNFPVRLEGLAHAHSQFCSYEPELFPGLIYRMIKPKIVLLIFVSGKVVLTGAKVRSDIYEAFDNIYHVLQTFRKA 361
            GIIP +QNVVAT NL  KLDLK IALRARNAEYNPKRFAAVIMRIREPKTTALIF+SGK+V+TGAKSE+ S  A+++YAKI+HKLG++ A F +F +QNIV+SCD+ F +RLEGLA+AHS +CSYEPELFPGLIYRM+KPKIVLLIFVSGK+VLTGAKVR DIY+AF+NIY VL   RKA
Sbjct:   20 GIIPTLQNVVATVNLSCKLDLKNIALRARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVITGAKSEKSSRMAAQRYAKIIHKLGFN-ATFDDFKIQNIVSSCDIKFSIRLEGLAYAHSNYCSYEPELFPGLIYRMVKPKIVLLIFVSGKIVLTGAKVRDDIYQAFNNIYPVLIQHRKA 198          
BLAST of Ggra9051.t1 vs. uniprot
Match: T2MG73 (TATA-box-binding protein n=2 Tax=Anthoathecata TaxID=406427 RepID=T2MG73_HYDVU)

HSP 1 Score: 277 bits (708), Expect = 5.780e-89
Identity = 139/180 (77.22%), Postives = 160/180 (88.89%), Query Frame = 0
Query:  182 GIIPEIQNVVATTNLDVKLDLKKIALRARNAEYNPKRFAAVIMRIREPKTTALIFSSGKIVVTGAKSERQSSRASRKYAKIVHKLGYDDAKFKEFTVQNIVASCDVNFPVRLEGLAHAHSQFCSYEPELFPGLIYRMIKPKIVLLIFVSGKVVLTGAKVRSDIYEAFDNIYHVLQTFRKA 361
            GIIP++QN+V+T NL  KLDLKKIAL ARNAEYNPKRFAAVIMRIREP+TTALIFSSGK+V TGAKSE QS  A+RKYA+++ KLG+  AKF +F +QNIV SCDV FP+RLEGL  AHSQFCSYEPELFPGLIYRM+KP+IVLLIFVSGKVVLTGAKVRS+IYEAF++IY +L+ FRK 
Sbjct:   77 GIIPQLQNIVSTVNLSCKLDLKKIALHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCTGAKSEEQSRLAARKYARVIQKLGFP-AKFVDFKIQNIVGSCDVKFPIRLEGLVLAHSQFCSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKVRSEIYEAFESIYPILRGFRKT 255          
BLAST of Ggra9051.t1 vs. uniprot
Match: A0A1L0FEV2 (Probable TATA-box-binding protein n=4 Tax=Hanseniaspora TaxID=29832 RepID=A0A1L0FEV2_9ASCO)

HSP 1 Score: 275 bits (704), Expect = 9.720e-89
Identity = 139/179 (77.65%), Postives = 158/179 (88.27%), Query Frame = 0
Query:  182 GIIPEIQNVVATTNLDVKLDLKKIALRARNAEYNPKRFAAVIMRIREPKTTALIFSSGKIVVTGAKSERQSSRASRKYAKIVHKLGYDDAKFKEFTVQNIVASCDVNFPVRLEGLAHAHSQFCSYEPELFPGLIYRMIKPKIVLLIFVSGKVVLTGAKVRSDIYEAFDNIYHVLQTFRK 360
            GI+P +QN+VAT NLD KLDLK IAL ARNAEYNPKRFAAVIMRIREPKTTALIF+SGK+VVTGAKSE+ S  ASRKYA+I+ K+G+D +KFK+F +QNIVASCDV FP+RLEGLA AH  F SYEPELFPGLIYRM+KPKIVLLIFVSGKVVLTGAK R +IY++F+NIY VL  FRK
Sbjct:   51 GIVPTLQNIVATVNLDCKLDLKTIALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVVTGAKSEQDSKLASRKYARIIQKIGFD-SKFKDFKIQNIVASCDVKFPIRLEGLAFAHGAFSSYEPELFPGLIYRMVKPKIVLLIFVSGKVVLTGAKKREEIYQSFENIYPVLSEFRK 228          
BLAST of Ggra9051.t1 vs. uniprot
Match: A0A074Y500 (Uncharacterized protein n=13 Tax=Fungi TaxID=4751 RepID=A0A074Y500_AURSE)

HSP 1 Score: 277 bits (708), Expect = 1.120e-88
Identity = 146/211 (69.19%), Postives = 168/211 (79.62%), Query Frame = 0
Query:  151 PKTDNLVSQPGASTDPVKSQGGPSASGRLSHGIIPEIQNVVATTNLDVKLDLKKIALRARNAEYNPKRFAAVIMRIREPKTTALIFSSGKIVVTGAKSERQSSRASRKYAKIVHKLGYDDAKFKEFTVQNIVASCDVNFPVRLEGLAHAHSQFCSYEPELFPGLIYRMIKPKIVLLIFVSGKVVLTGAKVRSDIYEAFDNIYHVLQTFRKA 361
            P    +V+Q GA   P      PSA   +S GI+P +QN+VAT NLD +LDLK IAL ARNAEYNPKRFAAVIMRIREPKTTALIF+SGK+VVTGAKSE  S  ASRKYA+I+ KLG++ AKF +F +QNIV SCD+ FP+RLEGLA  H  F SYEPELFPGLIYRM+KPKIVLLIFVSGK+VLTGAKVR +IY+AF+ IY VL  FRKA
Sbjct:   67 PAQQGVVAQQGAGVTPATPAATPSAGQGVS-GIVPTLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVVTGAKSEDDSKLASRKYARIIQKLGFN-AKFTDFKIQNIVGSCDIKFPIRLEGLAARHHMFSSYEPELFPGLIYRMMKPKIVLLIFVSGKIVLTGAKVREEIYQAFEMIYPVLSDFRKA 275          
The following BLAST results are available for this feature:
BLAST of Ggra9051.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IRU92.470e-12296.32TATA-box-binding protein n=1 Tax=Gracilariopsis ch... [more]
A0A7S0ZL161.230e-9675.60Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]
A0A1X6P8712.240e-9679.79Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A7S0XI967.030e-9375.62Hypothetical protein n=1 Tax=Erythrolobus madagasc... [more]
A7RWY11.040e-8977.22Predicted protein n=2 Tax=Nematostella vectensis T... [more]
A0A6P8I2012.820e-8977.78TATA-box-binding protein-like n=2 Tax=Actiniaria T... [more]
Q8ST283.400e-8976.67TRANSCRIPTION INITIATION FACTOR TFIID (TFIID-1) n=... [more]
T2MG735.780e-8977.22TATA-box-binding protein n=2 Tax=Anthoathecata Tax... [more]
A0A1L0FEV29.720e-8977.65Probable TATA-box-binding protein n=4 Tax=Hansenia... [more]
A0A074Y5001.120e-8869.19Uncharacterized protein n=13 Tax=Fungi TaxID=4751 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000814TATA-box binding proteinPRINTSPR00686TIFACTORIIDcoord: 230..248
score: 80.29
coord: 278..294
score: 66.21
coord: 187..202
score: 59.57
coord: 321..337
score: 85.36
coord: 211..230
score: 84.68
coord: 302..317
score: 83.78
IPR000814TATA-box binding proteinPFAMPF00352TBPcoord: 275..357
e-value: 4.0E-31
score: 106.7
coord: 185..265
e-value: 2.4E-31
score: 107.5
IPR000814TATA-box binding proteinPANTHERPTHR10126TATA-BOX BINDING PROTEINcoord: 144..360
IPR000814TATA-box binding proteinHAMAPMF_00408TATA_bind_prot_archcoord: 181..361
score: 28.488771
IPR012295TBP domain superfamilyGENE3D3.30.310.10coord: 192..278
e-value: 2.0E-82
score: 276.7
IPR012295TBP domain superfamilyGENE3D3.30.310.10coord: 188..358
e-value: 2.0E-82
score: 276.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 125..176
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 125..179
NoneNo IPR availablePANTHERPTHR10126:SF42TATA BOX-BINDING PROTEIN-LIKE PROTEIN 2-RELATEDcoord: 144..360
NoneNo IPR availableSUPERFAMILY55945TATA-box binding protein-likecoord: 185..269
NoneNo IPR availableSUPERFAMILY55945TATA-box binding protein-likecoord: 271..360
IPR030491TATA-box binding protein, conserved sitePROSITEPS00351TFIIDcoord: 306..355
IPR033710TATA-box binding protein, eukaryoticCDDcd04516TBP_eukaryotescoord: 184..358
e-value: 1.93189E-120
score: 343.432

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000176_piloncontigtig00000176_pilon:46570..47920 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra9051.t1Ggra9051.t1Gracilaria gracilis GNS1m malemRNAtig00000176_pilon 46570..47920 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra9051.t1 ID=Ggra9051.t1|Name=Ggra9051.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=364bp
MRGVIQTNGRHNQLRDSKTEKRPTAHYPLFATRTTVDIYHLRRFFPPRGR
VVCRRFVPSCTLSFAFARRSAASTFPFRRARRGLLRVLAGVDVVLRFRLS
CASRQPPLNLRLTASLAPLSLCSTPPSFQPNNPSETPPQSHAAAGPSTVT
PKTDNLVSQPGASTDPVKSQGGPSASGRLSHGIIPEIQNVVATTNLDVKL
DLKKIALRARNAEYNPKRFAAVIMRIREPKTTALIFSSGKIVVTGAKSER
QSSRASRKYAKIVHKLGYDDAKFKEFTVQNIVASCDVNFPVRLEGLAHAH
SQFCSYEPELFPGLIYRMIKPKIVLLIFVSGKVVLTGAKVRSDIYEAFDN
IYHVLQTFRKAKH*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000814TBP
IPR012295TBP_dom_sf
IPR030491TBP_CS
IPR033710TBP_eukaryotic